miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42513_sbi-MIR166f:mirbase
Length = 139
Score = 276 bits (139), Expect = 4e-75
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 1 ccttggtcatgggggtttgtggggaatgttggctggctcgaggcatccgcgtcctggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttggtcatgggggtttgtggggaatgttggctggctcgaggcatccgcgtcctggctt 60
Query: 61 gcagatcgttttgcctgctaccggaaagatcgagaggcgtcggaccaggcttcattcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagatcgttttgcctgctaccggaaagatcgagaggcgtcggaccaggcttcattcctc 120
Query: 121 gcaaaccggtgcatccatg 139
|||||||||||||||||||
Sbjct: 121 gcaaaccggtgcatccatg 139
>42729_zma-MIR166m:mirbase
Length = 156
Score = 141 bits (71), Expect = 2e-34
Identities = 133/153 (86%), Gaps = 18/153 (11%)
Strand = Plus / Plus
Query: 1 ccttggtcatgggggtttgtggggaatgttggctggctcgaggcatccgcgtcctggct- 59
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccttggtc-tgggggtttgtggggaatgttggctggctcgaggcatccgcgtcctggctc 60
Query: 60 ----------tgcagatc--gttttgcctgcta----ccggaaagatcgagaggcgtcgg 103
||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 61 gcagtcgcagcgcagatcgtgttttgcctgctaccggccggacagatcgagaggcgtcgg 120
Query: 104 accaggcttcattcctcgcaaaccggtgcatcc 136
|||||||||||||||||||||||||||||||||
Sbjct: 121 accaggcttcattcctcgcaaaccggtgcatcc 153
>41944_osa-MIR166h:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 17 ttgtggggaatgttggctggctcgaggcatcc 48
||||||||||||||||||||||||||| ||||
Sbjct: 7 ttgtggggaatgttggctggctcgaggtatcc 38
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 97 gcgtcggaccaggcttcattcctcgcaa 124
||||||||||||||||||||||||||||
Sbjct: 86 gcgtcggaccaggcttcattcctcgcaa 113
>41588_vvi-MIR166f:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 17 ttgtggggaatgttggctggctcgaggc 44
||||||||||||||||||||||||||||
Sbjct: 6 ttgtggggaatgttggctggctcgaggc 33
>41584_vvi-MIR166b:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgaggcat 46
|||| ||||||||||||||||||||||||||
Sbjct: 5 tttgaggggaatgttggctggctcgaggcat 35
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcctcgcaaa 125
|||||||||||||||||||||| ||||
Sbjct: 67 gtcggaccaggcttcattcctctcaaa 93
>40672_mtr-MIR166e:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgaggc 44
|||| ||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttggctggctcgaggc 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 aggcgtcggaccaggcttcattcc 118
|||| |||||||||||||||||||
Sbjct: 76 aggcttcggaccaggcttcattcc 99
>39376_pab-MIR166a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcctc 120
|||||||||||||||||||||||
Sbjct: 53 cgtcggaccaggcttcattcctc 75
>42728_zma-MIR166l:mirbase
Length = 137
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 98 tcggaccaggcttcattcctc 118
>42518_sbi-MIR166k:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 83 tcggaccaggcttcattcctc 103
>41943_osa-MIR166g:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 115 tcggaccaggcttcattcctc 135
>41748_bdi-MIR166f:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcctc 114
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 133 cgtcggaccaggcttcattcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 5 tttgaggggaatgttgtctggctcgagg 32
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 127 cgtcggaccaggcttcattcc 147
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 5 tttgaggggaatgttgtctggctcgagg 32
>41327_ptc-MIR166f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ggggaatgttggctggctcga 41
|||||||||||||||||||||
Sbjct: 11 ggggaatgttggctggctcga 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 aggcgtcggaccaggcttcattcc 118
|||| |||||||||||||||||||
Sbjct: 71 aggcttcggaccaggcttcattcc 94
>41325_ptc-MIR166d:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ggggaatgttggctggctcga 41
|||||||||||||||||||||
Sbjct: 11 ggggaatgttggctggctcga 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 aggcgtcggaccaggcttcattcc 118
|||| |||||||||||||||||||
Sbjct: 71 aggcttcggaccaggcttcattcc 94
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 103 cgtcggaccaggcttcattcc 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 6 tttgaggggaatgttgtctggctcgagg 33
>41279_ctr-MIR166:mirbase
Length = 414
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgaggc 44
|||| ||||||||||| ||||||||||||
Sbjct: 43 tttgaggggaatgttgtctggctcgaggc 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 189 cgtcggaccaggcttcattcc 209
>41226_csi-MIR166e:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 137 cgtcggaccaggcttcattcc 157
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 15 tttgaggggaatgttgtctggctcgagg 42
>41222_csi-MIR166a:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgaggc 44
|||| ||||||||||| ||||||||||||
Sbjct: 13 tttgaggggaatgttgtctggctcgaggc 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 159 cgtcggaccaggcttcattcc 179
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 119 cgtcggaccaggcttcattcc 139
>41170_aqc-MIR166d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcctc 125
>41167_aqc-MIR166a:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcctc 106
>41096_tcc-MIR166c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 101 tcggaccaggcttcattcctc 121
>41048_ghr-MIR166b:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 128 cgtcggaccaggcttcattcc 148
>40673_mtr-MIR166f:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 154 tcggaccaggcttcattcctc 174
>40670_mtr-MIR166c:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcctc 120
|||||||||||||||||||||
Sbjct: 80 tcggaccaggcttcattcctc 100
>40351_rco-MIR166e:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 104 cgtcggaccaggcttcattcc 124
>40348_rco-MIR166b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 92 cgtcggaccaggcttcattcc 112
>40264_bna-MIR166a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 109 cgtcggaccaggcttcattcc 129
>40036_ath-MIR166e:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 117 cgtcggaccaggcttcattcc 137
>40033_ath-MIR166b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 94 cgtcggaccaggcttcattcc 114
>39825_aly-MIR166e:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 148 cgtcggaccaggcttcattcc 168
>39821_aly-MIR166a:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 131 cgtcggaccaggcttcattcc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 13 tttgaggggaatgttgtctggctcgagg 40
>39420_pta-MIR166a:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 cgtcggaccaggcttcattcc 118
|||||||||||||||||||||
Sbjct: 64 cgtcggaccaggcttcattcc 84
>41940_osa-MIR166d:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 14 tttgaggggaatgttgtctggctcgagg 41
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 28 tttgaggggaatgttgtctggctcgagg 55
>41583_vvi-MIR166a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcct 119
>41532_sly-MIR166b:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 153 gtcggaccaggcttcattcc 172
>41338_ptc-MIR166q:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 123 tcggaccaggcttcattcct 142
>41336_ptc-MIR166o:mirbase
Length = 324
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 296 tcggaccaggcttcattcct 315
>41335_ptc-MIR166n:mirbase
Length = 331
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 303 tcggaccaggcttcattcct 322
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 6 tttgaggggaatgttgtctggctcgagg 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcc 132
>41331_ptc-MIR166j:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 6 tttgaggggaatgttgtctggctcgagg 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcc 132
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 6 tttgaggggaatgttgtctggctcgagg 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcc 153
>41169_aqc-MIR166c:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcct 108
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>40669_mtr-MIR166b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 145 tcggaccaggcttcattcct 164
>40439_gma-MIR166a:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 tttgtggggaatgttggctggctcgagg 43
|||| ||||||||||| |||||||||||
Sbjct: 16 tttgaggggaatgttgtctggctcgagg 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcc 125
>40266_bna-MIR166c:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattcc 111
>40265_bna-MIR166b:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattcc 109
>40037_ath-MIR166f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcc 96
>39826_aly-MIR166f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcc 96
>39735_smo-MIR166c:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcc 125
>39421_pta-MIR166b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 gtcggaccaggcttcattcc 118
||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattcc 108
>39377_pab-MIR166b:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcggaccaggcttcattcct 119
||||||||||||||||||||
Sbjct: 71 tcggaccaggcttcattcct 90
