miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42514_sbi-MIR166g:mirbase
Length = 134
Score = 266 bits (134), Expect = 4e-72
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1 tcatgctcggattaggttagggggattgttgtctggctcggggtctccggtcgagaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatgctcggattaggttagggggattgttgtctggctcggggtctccggtcgagaatcc 60
Query: 61 ttggccttgccggagttgtcgttgaccggagatttcggaccaggcttcaatccctttaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggccttgccggagttgtcgttgaccggagatttcggaccaggcttcaatccctttaac 120
Query: 121 catgcggcatttag 134
||||||||||||||
Sbjct: 121 catgcggcatttag 134
>42727_zma-MIR166k:mirbase
Length = 168
Score = 97.6 bits (49), Expect = 2e-21
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 75 gttgtcgttgaccggagatttcggaccaggcttcaatccctttaaccatgcggcatt 131
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 109 gttgtcgtcgaccggagatttcggaccaggcttcaatccctttgaccatgcggcatt 165
Score = 93.7 bits (47), Expect = 3e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 2 catgctcggattaggttagggggattgttgtctggctcggggtctccggtcgaga 56
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catgctcgggttaggtcagggggattgttgtctggctcggggtctccggtcgaga 56
>42730_zma-MIR166n:mirbase
Length = 96
Score = 95.6 bits (48), Expect = 8e-21
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 22 gggattgttgtctggctcggggtctccggtcgagaat-ccttggccttgccggagttgtc 80
|||||||||||||||||||| |||||||||||||| ||||| | ||||||| ||||
Sbjct: 1 gggattgttgtctggctcggtgtctccggtcgagayggccttgccggcgccggagctgtc 60
Query: 81 gttgaccggagatttcggaccaggcttcaatccctt 116
|| |||||||||| ||||||||||||||||||||||
Sbjct: 61 gtcgaccggagatctcggaccaggcttcaatccctt 96
>41947_osa-MIR166k:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaaccatgc 125
|||||||||||||||||||||||||||||||
Sbjct: 97 tcggaccaggcttcaatccctttaaccatgc 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 attaggttagggggattgttgtctggctcg 40
||||||||| |||| |||||||||||||||
Sbjct: 1 attaggttaaggggtttgttgtctggctcg 30
>41948_osa-MIR166l:mirbase
Length = 117
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaacca 122
||||||||||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcaatccctttaacca 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 ttaggttagggggattgttgtctgg 36
|||||||| ||||||||||||||||
Sbjct: 2 ttaggttaaggggattgttgtctgg 26
>42726_zma-MIR166j:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaac 120
||||||||||||||||||||||||||
Sbjct: 115 tcggaccaggcttcaatccctttaac 140
>42512_sbi-MIR166e:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaac 120
||||||||||||||||||||||||||
Sbjct: 112 tcggaccaggcttcaatccctttaac 137
>41949_osa-MIR166m:mirbase
Length = 200
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaacca 122
||||||||||||||| ||||||||||||
Sbjct: 147 tcggaccaggcttcattccctttaacca 174
>41837_bdi-MIR5168:mirbase
Length = 208
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 tcggaccaggcttcaatccctttaacca 122
|||||||||||||| |||||||||||||
Sbjct: 157 tcggaccaggcttcgatccctttaacca 184
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ggggattgttgtctggctcggggt 44
||||| ||||||||||||||||||
Sbjct: 29 ggggaatgttgtctggctcggggt 52
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 65 gatttcggaccaggcttcattccc 88
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ggggattgttgtctggctcg 40
||||||||||||||||||||
Sbjct: 10 ggggattgttgtctggctcg 29
>41531_sly-MIR166a:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 82 gatttcggaccaggcttcattccc 105
>41326_ptc-MIR166e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 73 gatttcggaccaggcttcattccc 96
>41323_ptc-MIR166b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 73 gatttcggaccaggcttcattccc 96
>41224_csi-MIR166c:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 96 gatttcggaccaggcttcattccc 119
>41168_aqc-MIR166b:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 64 gatttcggaccaggcttcattccc 87
>41094_tcc-MIR166a:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 74 gatttcggaccaggcttcattccc 97
>40349_rco-MIR166c:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 gatttcggaccaggcttcaatccc 114
||||||||||||||||||| ||||
Sbjct: 62 gatttcggaccaggcttcattccc 85
