miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46270_miR437:micropc
          Length = 175

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 145/173 (83%), Gaps = 3/173 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcaaacttctctaattttgatcaatgttatacaaaaa-tatattagcatatacaatacta 59
           |||||||||||||| |||||||||  || || ||||| ||||||| ||| |||||   | 
Sbjct: 172 tcaaacttctctaactttgatcaagtttttagaaaaaatatattatcatctacaa-gttc 114

                                                                       
Query: 60  aataaaagcattatcaagacatatttcatggtagatgtaat-gaaataatttgatgtttc 118
           |||||| |||||||||| | |||||||||||   || |||| ||| || |||||| ||  
Sbjct: 113 aataaatgcattatcaaaatatatttcatggagaatttaatggaactagtttgatattct 54

                                                                
Query: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
           |||| |||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 53  agattttggtgcatttttctataaacttgatcaaagttagagaggtttgactt 1



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
           |||||||| ||||||| |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175




>46472_miR437:micropc
          Length = 180

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
           ||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 133 ttttctataaacttggtcaaagttagaga 161
           |||||||||||||||||||||||| ||||
Sbjct: 39  ttttctataaacttggtcaaagttggaga 11




>45012_miR437:micropc
          Length = 149

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                       
Query: 85  tcatggtagatgtaatgaaat-aatttgatgtttcagatgttggtgcatttttctataaa 143
           ||||||||||| || |||||| ||||||||||| ||||| || |||||  ||| ||| ||
Sbjct: 87  tcatggtagatttagtgaaattaatttgatgttgcagatattagtgcagatttatatgaa 28

                                       
Query: 144 cttggtcaaagttagagaagtttgactt 171
           ||| ||||||||||| ||||||||||||
Sbjct: 27  cttagtcaaagttag-gaagtttgactt 1



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
           |||||||  ||||||| || ||||||||||||||||||||
Sbjct: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149




>45607_miR437:micropc
          Length = 177

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
           ||||||||| ||  |||||||||||||||||||| ||||||
Sbjct: 137 atttttctaaaactttggtcaaagttagagaagtctgactt 177



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 5   acttctctaattttgatcaatgttatacaaaaatatattagcatatacaa 54
           |||||||||| ||||| ||| ||| || |||||||||||| ||| |||||
Sbjct: 170 acttctctaactttgaccaaagttttagaaaaatatattaacatctacaa 121