miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39735_smo-MIR166c:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 tatgttgcggggagtgctgcctggctcgagacagcatcgccgagatctgatcaaatcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgttgcggggagtgctgcctggctcgagacagcatcgccgagatctgatcaaatcgca 60
Query: 61 aagttgagaaacaagcatcacagtttgatctggagatcgtgttgtgtcggaccaggcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagttgagaaacaagcatcacagtttgatctggagatcgtgttgtgtcggaccaggcttc 120
Query: 121 attcccctcagctacaaa 138
||||||||||||||||||
Sbjct: 121 attcccctcagctacaaa 138
>39469_ppt-MIR166f:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagct 133
|||||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcagct 100
>39421_pta-MIR166b:mirbase
Length = 125
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 104 gtgtcggaccaggcttcattcccctca 130
|||||||||||||||||||||||||||
Sbjct: 87 gtgtcggaccaggcttcattcccctca 113
>40265_bna-MIR166b:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccctca 130
||||||||||||||||||||||||||
Sbjct: 89 tgtcggaccaggcttcattcccctca 114
>40037_ath-MIR166f:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccctca 130
||||||||||||||||||||||||||
Sbjct: 76 tgtcggaccaggcttcattcccctca 101
>39826_aly-MIR166f:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccctca 130
||||||||||||||||||||||||||
Sbjct: 76 tgtcggaccaggcttcattcccctca 101
>39734_smo-MIR166b:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 102 ttgtgtcggaccaggcttcattcccctcag 131
|||| |||||||||||||||||||||||||
Sbjct: 94 ttgtctcggaccaggcttcattcccctcag 123
>39470_ppt-MIR166g:mirbase
Length = 146
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctcagc 121
>39468_ppt-MIR166e:mirbase
Length = 146
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctcagc 121
>39465_ppt-MIR166b:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcagc 99
>39464_ppt-MIR166a:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcagc 99
>41937_osa-MIR166a:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcag 131
|||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattcccctcag 134
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcag 131
|||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccctcag 145
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccctca 130
|||||||||||||||||||||||||
Sbjct: 120 gtcggaccaggcttcattcccctca 144
>40266_bna-MIR166c:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccctca 130
|||||||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattcccctca 116
>40036_ath-MIR166e:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccctca 130
|||||||||||||||||||||||||
Sbjct: 118 gtcggaccaggcttcattcccctca 142
>39825_aly-MIR166e:mirbase
Length = 200
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccctca 130
|||||||||||||||||||||||||
Sbjct: 149 gtcggaccaggcttcattcccctca 173
>42517_sbi-MIR166j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>41942_osa-MIR166f:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccctca 95
>41940_osa-MIR166d:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctca 114
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccctca 122
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>41588_vvi-MIR166f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattcccctca 152
>41531_sly-MIR166a:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctca 109
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcccctca 91
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>41327_ptc-MIR166f:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>41325_ptc-MIR166d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>40672_mtr-MIR166e:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 81 tcggaccaggcttcattcccctca 104
>40038_ath-MIR166g:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>39827_aly-MIR166g:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcccctca 112
>39733_smo-MIR166a:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctca 130
||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccctca 131
>41584_vvi-MIR166b:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 104 gtgtcggaccaggcttcattcccctca 130
|||||||||||||||||||||| ||||
Sbjct: 65 gtgtcggaccaggcttcattcctctca 91
>41532_sly-MIR166b:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccc 127
|||||||||||||||||||||||
Sbjct: 152 tgtcggaccaggcttcattcccc 174
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccc 127
|||||||||||||||||||||||
Sbjct: 112 tgtcggaccaggcttcattcccc 134
>41331_ptc-MIR166j:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccc 127
|||||||||||||||||||||||
Sbjct: 112 tgtcggaccaggcttcattcccc 134
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccc 127
|||||||||||||||||||||||
Sbjct: 133 tgtcggaccaggcttcattcccc 155
>40439_gma-MIR166a:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tgtcggaccaggcttcattcccc 127
|||||||||||||||||||||||
Sbjct: 105 tgtcggaccaggcttcattcccc 127
>39467_ppt-MIR166d:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctc 129
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>39466_ppt-MIR166c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctc 129
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcccc 155
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 128 gtcggaccaggcttcattcccc 149
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 104 gtcggaccaggcttcattcccc 125
>41279_ctr-MIR166:mirbase
Length = 414
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 190 gtcggaccaggcttcattcccc 211
>41226_csi-MIR166e:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 138 gtcggaccaggcttcattcccc 159
>41222_csi-MIR166a:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 160 gtcggaccaggcttcattcccc 181
>41167_aqc-MIR166a:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||| ||||||
Sbjct: 86 tcggaccaggcttcattcctctcagc 111
>41048_ghr-MIR166b:mirbase
Length = 154
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 129 gtcggaccaggcttcattcccc 150
>40351_rco-MIR166e:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 105 gtcggaccaggcttcattcccc 126
>40348_rco-MIR166b:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 93 gtcggaccaggcttcattcccc 114
>40347_rco-MIR166a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccct 128
||||||||||||||||||||||
Sbjct: 124 tcggaccaggcttcattcccct 145
>40267_bna-MIR166d:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccctcagc 132
||||||||||||||||||||| ||||
Sbjct: 77 tcggaccaggcttcattccccccagc 102
>40264_bna-MIR166a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 110 gtcggaccaggcttcattcccc 131
>40033_ath-MIR166b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 95 gtcggaccaggcttcattcccc 116
>39821_aly-MIR166a:mirbase
Length = 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 132 gtcggaccaggcttcattcccc 153
>39475_ppt-MIR166l:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 cggaccaggcttcattcccctc 129
||||||||||||||||||||||
Sbjct: 85 cggaccaggcttcattcccctc 106
>39474_ppt-MIR166k:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 cggaccaggcttcattcccctc 129
||||||||||||||||||||||
Sbjct: 79 cggaccaggcttcattcccctc 100
>39473_ppt-MIR166j:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 cggaccaggcttcattcccctc 129
||||||||||||||||||||||
Sbjct: 83 cggaccaggcttcattcccctc 104
>39472_ppt-MIR166i:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccct 128
||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccct 95
>39471_ppt-MIR166h:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tcggaccaggcttcattcccct 128
||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccct 99
>39420_pta-MIR166a:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gtcggaccaggcttcattcccc 127
||||||||||||||||||||||
Sbjct: 65 gtcggaccaggcttcattcccc 86
