miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 196 bits (99), Expect = 8e-50
Identities = 120/127 (94%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||||||||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttagaac 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 65 taaaatacatctagatacatccccttttattcattttgatgacaagtatttccggacgga 124
Query: 154 gggagta 160
|||||||
Sbjct: 125 gggagta 131
Score = 141 bits (71), Expect = 4e-33
Identities = 113/127 (88%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaaaatgaataaaaggggatgtatctagatg 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|| || |||| ||||||||| || | |||||||||||||||| ||||| ||||||||
Sbjct: 71 tattttagttctaaatacatccctttttgtccattttgatgacaagtattttcggacgga 12
Query: 154 gggagta 160
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 188 bits (95), Expect = 2e-47
Identities = 119/127 (93%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 71 taaaatatgtctagatacatccccttttatccattttgatgacaagtatttccggacgga 12
Query: 154 gggagta 160
|||||||
Sbjct: 11 gggagta 5
Score = 117 bits (59), Expect = 6e-26
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatctagaca 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|| || |||||||||||| | || || || ||||||||||| ||||| ||||||||
Sbjct: 65 tattttagttctagatacatctctttttagtcactttgatgacaagtattttcggacgga 124
Query: 154 gggagta 160
|||||||
Sbjct: 125 gggagta 131
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 168 bits (85), Expect = 2e-41
Identities = 119/129 (92%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||| ||||||||||||||||||||||| |||| | | |||||||||||||
Sbjct: 5 tactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatgtatctagaac 64
Query: 94 taaaatacatctagatacat-ccccttctatccattttgatgacaactatttccggacgg 152
|||||||||||||||||||| |||||| ||||||||||| |||||| |||||||||||||
Sbjct: 65 taaaatacatctagatacatcccccttttatccattttggtgacaagtatttccggacgg 124
Query: 153 agggagtaa 161
|||||||||
Sbjct: 125 agggagtaa 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 109/128 (85%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaa-ggggatgtatctagaa 92
||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtcaccaaaatggataaaagggggatgtatctagat 73
Query: 93 ctaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgg 152
|| || ||||||||||| | | |||||||||||||||||| ||||| || ||||
Sbjct: 72 gtattttagttctagatacatttcttattatccattttgatgacaagtattttcgaacgg 13
Query: 153 agggagta 160
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 165 bits (83), Expect = 3e-40
Identities = 116/127 (91%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||| ||||||||| |||| |||||| | | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtgtatctagaac 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||
Sbjct: 65 taaaatacatctagatacatccccttttattcatcttgatgacaagtatttccggacgga 124
Query: 154 gggagta 160
|||||||
Sbjct: 125 gggagta 131
Score = 133 bits (67), Expect = 1e-30
Identities = 112/127 (88%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaataaaaggggatgtatctagatg 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|| || |||||||||| | | || |||||||| ||||||||| ||||||||||||||
Sbjct: 71 tattttagttctagatacaccactttttatccattctgatgacaaatatttccggacgga 12
Query: 154 gggagta 160
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 163 bits (82), Expect = 1e-39
Identities = 112/122 (91%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||
Sbjct: 130 tactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaac 71
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
||||||||||||| ||||||||| || ||| ||||||||||||| ||||||||||||||
Sbjct: 70 taaaatacatctaaatacatcccgttttatttattttgatgacaagtatttccggacgga 11
Query: 154 gg 155
||
Sbjct: 10 gg 9
Score = 91.7 bits (46), Expect = 3e-18
Identities = 103/122 (84%)
Strand = Plus / Plus
Query: 39 cctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaactaaaa 98
|||||||||| ||||||||||||||||||| ||||||| ||||||||| |||| ||
Sbjct: 9 cctccgtccggaaatacttgtcatcaaaataaataaaacgggatgtatttagatgtattt 68
Query: 99 tacatctagatacatccccttctatccattttgatgacaactatttccggacggagggag 158
|| |||||||| ||| | || | | |||||||||||||| ||||| |||||||||||||
Sbjct: 69 tagttctagatatatctctttttgttcattttgatgacaagtattttcggacggagggag 128
Query: 159 ta 160
||
Sbjct: 129 ta 130
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 149 bits (75), Expect = 2e-35
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||| || ||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 5 tactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaagaatgtatctagaat 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||
Sbjct: 65 taaaatacatctagatacatcttcttttatccattttgatgacaagtatttctggacgga 124
Query: 154 gggagta 160
| |||||
Sbjct: 125 gagagta 131
Score = 87.7 bits (44), Expect = 5e-17
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaa 92
|||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 132 ctactctctccgtccagaaatacttgtcatcaaaatggataaaagaagatgtatctagat 73
Query: 93 ctaaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgg 152
|| || ||||||||||| | || |||||||||||||||||| ||||| ||||||
Sbjct: 72 gtattttaattctagatacattcttttttatccattttgatgacaagtattttcggacga 13
Query: 153 agggagta 160
|| |||||
Sbjct: 12 agcgagta 5
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 147 bits (74), Expect = 6e-35
Identities = 116/130 (89%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||| |||||| |||||||||||||| |||||| |||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
||| ||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||
Sbjct: 71 taatatacatctagatacatctccttttatttattttgatgacaagtatttccggacgga 12
Query: 154 gggagtaatt 163
|| |||||||
Sbjct: 11 ggaagtaatt 2
Score = 109 bits (55), Expect = 1e-23
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtccggaaatacttgtcatcaaaataaataaaaggagatgtatctagatg 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|| | || | |||||| |||| || |||||||||||||||||| ||||| |||||||
Sbjct: 65 tatattagttttagatatatccttttttatccattttgatgacaattatttttggacgga 124
Query: 154 gggagta 160
|||||||
Sbjct: 125 gggagta 131
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 131 bits (66), Expect = 4e-30
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 43 cgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaactaaaataca 102
||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatgatgtacctagaactaaaataca 73
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccgg 148
|||| |||||| ||||| ||| |||||||||||||| |||||||||
Sbjct: 74 tctatatacattcccttttattcattttgatgacaagtatttccgg 119
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 50 aaatacttgtcatcaaaatgaataaaaggggatgtatctagaactaaaatacatctagat 109
|||||||||||||||||||||||||||||| |||||| |||| || || ||||| |
Sbjct: 115 aaatacttgtcatcaaaatgaataaaagggaatgtatatagatgtattttagttctaggt 56
Query: 110 acatccccttctatccattttgatgacaactatttccggacg 151
||||| || |||||||||||||||||| ||||| ||||||
Sbjct: 55 acatcattttttatccattttgatgacaagtattttcggacg 14
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 123 bits (62), Expect = 9e-28
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||||||||||||||||||||| ||||| |||| | ||||||| ||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 94 taaaatacatctagatacatcc 115
||||||||||||||||||||||
Sbjct: 82 taaaatacatctagatacatcc 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 129 ttgatgacaactatttccggacggagggagta 160
|||||||||| ||||| |||||||||||||||
Sbjct: 111 ttgatgacaagtattttcggacggagggagta 142
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 123 bits (62), Expect = 9e-28
Identities = 104/118 (88%)
Strand = Plus / Plus
Query: 43 cgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaactaaaataca 102
||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||| |
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaagagatgtacctagaactaaaatata 73
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
||||||||||| | || ||| | ||||||||||| ||||| |||||||||||||||
Sbjct: 74 tctagatacattcttttttatttactttgatgacaagtattttcggacggagggagta 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 100/118 (84%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtaaataaaaaagaatgtatctagata 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacg 151
|| || ||||| |||||| | || |||||||||||||||||| ||||| ||||||
Sbjct: 71 tattttagttctaggtacatctctttttatccattttgatgacaagtattttcggacg 14
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 117 bits (59), Expect = 6e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 121 tactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctagaac 62
Query: 94 taaaatacatctagataca 112
|||||||||||||||||||
Sbjct: 61 taaaatacatctagataca 43
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 64 tctagatacattcatttttatccattttgatgacaagtattttcggacagagggagta 121
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 30 ttactactccctccgtccgaaaatacttgtcat 62
||||||||||||| |||||||||||||||||||
Sbjct: 1 ttactactccctctgtccgaaaatacttgtcat 33
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 117 bits (59), Expect = 6e-26
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
||||||| | || |||||||| ||| ||| ||||||||||||| ||||| |||||| |
Sbjct: 71 taaaatatgtttaaatacatcctcttatatttattttgatgacaagtattttcggacgaa 12
Query: 154 gggagta 160
|||||||
Sbjct: 11 gggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||| |||||||||||||||||||||||||| |||| ||| |||||||| || |
Sbjct: 5 tactcccttcgtccgaaaatacttgtcatcaaaataaatataagaggatgtatttaaaca 64
Query: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
|| || |||| |||||| || |||||||||||||||||| ||||| ||||||||
Sbjct: 65 tattttagttctaaatacatttatttttatccattttgatgacaagtattttcggacgga 124
Query: 154 gggagta 160
|||||||
Sbjct: 125 gggagta 131
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 107 bits (54), Expect = 6e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||| |||||||||||| | ||||| |||||| |||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 94 taaaatacatctagatacatcc 115
||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtc 31
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 107 bits (54), Expect = 6e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||| |||||||||||| | ||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 94 taaaatacatctagatacatcc 115
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| || ||||||||| ||||| |||||| |||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 94 taaaatacatctagatacatcc 115
||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
|||||||| |||| || ||||||||| |||||| || ||||||||||||||||||
Sbjct: 64 tctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| || |||||||| |||||||| | | || |||||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 94 taaaatacatctagatacatcc 115
|||||||| |||||||||||||
Sbjct: 65 taaaatacgtctagatacatcc 86
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
||||||||||||| |||| |||||||||| ||||| || ||||||||||||||||||
Sbjct: 62 tctagatacatccatttctttccattttgacgacaagtacttccggacggagggagta 5
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 81.8 bits (41), Expect = 3e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||| ||
Sbjct: 120 tactccctccgtccggaaatacttgtcataaaaatgtataaaa-tggatgtatctataag 62
Query: 94 taaaatacatctagatacatc 114
||||||| ||||||||||||
Sbjct: 61 taaaataagtctagatacatc 41
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 125 cattttgatgacaactatttccggacggagggagta 160
|||||| ||||||| |||||||||||||||||||||
Sbjct: 85 catttttatgacaagtatttccggacggagggagta 120
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaag 77
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggataaaag 48
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaataaaagggg 80
||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 97 ctacttcctccgtccgaaaatacttgtcatcaaaatggataaaagggg 50
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 121 tatccattttgatgacaactatttccggacggagggagta 160
|||||||||||||||||| ||||| |||||||||||||||
Sbjct: 44 tatccattttgatgacaagtattttcggacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 114 ccccttctatccattttgatgacaactatttccggacggagggagta 160
|||||| |||||||||||||||||| ||||| |||||||||| ||||
Sbjct: 50 ccccttttatccattttgatgacaagtattttcggacggaggaagta 96
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| || ||||||||| ||||| |||||| ||||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 94 taaaatacatctagatacat 113
|| |||||||||||||||||
Sbjct: 65 tataatacatctagatacat 84
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
||||||||||||| || ||| ||||| |||||| || ||||||||||||||||||
Sbjct: 62 tctagatacatccatttttatacatttatgtgacaagtaattccggacggagggagta 5
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 94 taaaatacatctagatacatcc 115
|||||||| ||||| |||||||
Sbjct: 65 taaaatacgtctaggtacatcc 86
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||| | || || |||||||| |||||||||| || ||||||||||| |||
Sbjct: 121 tactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgtatctataac 62
Query: 94 taaaatacatctagatacatcc 115
||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| || ||||||| ||||| |||||| |||||||||||||||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 62
Query: 94 taaaatacatctagatacatcc 115
|||||||| |||||||||||||
Sbjct: 61 taaaatacgtctagatacatcc 40
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 37 tccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaactaa 96
||||||||| ||||| |||| |||| |||||| |||||| ||||||||||| || |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 97 aatacatctagatacat 113
|||||||||||||||||
Sbjct: 68 aatacatctagatacat 84
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||||||||||||||||||||||
Sbjct: 75 ggatgtatctagaactaaaatacatctagatacatcc 39
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||||||||||||||||||||||
Sbjct: 76 ggatgtatctagaactaaaatacatctagatacatcc 40
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ttactactccctccgtccgaaaatacttgtcat 62
||||||||||| ||||||| |||||||||||||
Sbjct: 1 ttactactcccgccgtccggaaatacttgtcat 33
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||||||||||||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatctagatacatcc 76
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||| ||||| ||| || |||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctagaac 64
Query: 94 taaaatacatct 105
||||||||||||
Sbjct: 65 taaaatacatct 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||||||||||||||||||||||||
Sbjct: 122 tactccctccgtccgaaaatacttgtc 96
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
||||||||||||| || ||||||||| ||||| |||||||||||||||||||||
Sbjct: 62 tctagatacatccatttatatccatttctgcgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctag 90
|||||||||||| ||||| || |||||||| ||||| |||||| ||||||||||||
Sbjct: 2 tactactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatctag 61
Query: 91 aactaaaatacatctagata 110
|| |||||||||||||||||
Sbjct: 62 aattaaaatacatctagata 81
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtc 95
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacat 113
|||||||||||||||||||||||||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatctagatacat 74
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 67.9 bits (34), Expect = 5e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||
Sbjct: 120 tactccctccatccaaaaatacttgttgg-aaaatggataaaaatggatgtatctagaag 62
Query: 94 taaaatacatctagatacatcc 115
|||||||| |||||||||||||
Sbjct: 61 taaaatacgtctagatacatcc 40
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
||||||||||||||||||||||||||| |||||||||
Sbjct: 40 ggatgtatctagaactaaaatacatcttgatacatcc 76
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
||||||||||| |||||||||||||||||||||||||
Sbjct: 76 ggatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 81 atgtatctagaactaaaatacatctagatacat 113
|||||||||||||||||||||||||||||||||
Sbjct: 47 atgtatctagaactaaaatacatctagatacat 79
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||| ||||||||||||||||||||
Sbjct: 76 ggatgtatctagaactgaaatacatctagatacatcc 40
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtcat 62
||||||||||||||||||||||||||||||||
Sbjct: 114 tactactccctccgtccgaaaatacttgtcat 83
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||| ||||||||||||||||||||||||| ||||
Sbjct: 40 ggatgtgtctagaactaaaatacatctagatatatcc 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 122 atccattttgatgacaactatttccggacggagggagta 160
||||||||||||||||| || ||| ||||||||||||||
Sbjct: 43 atccattttgatgacaagtaattctggacggagggagta 5
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||| ||||||||||||||||||||||| |||||||| |||| || ||| || |||
Sbjct: 5 tactctctccgtccgaaaatacttgtcattaaaatgaacaaaa-aaaatatatttaaaac 63
Query: 94 taaaatacatctagatacat 113
|||||||||| |||||||||
Sbjct: 64 taaaatacatttagatacat 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaa 75
||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 130 tactccctctatccgaaaatacttgtcatcaaaataaataaa 89
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 80 gatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||||||| |||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 7e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||| | |||||| || | | ||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggat-atattggatgtatctataac 63
Query: 94 taaaatacatctagatacat 113
||||||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 121 tatccattttgatgacaactatttccggacggagggagta 160
|||||||||| | ||||| |||||||||||||||||||||
Sbjct: 44 tatccatttttaggacaagtatttccggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtc 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 134 gacaactatttccggacggagggagta 160
||||| |||||||||||||||||||||
Sbjct: 94 gacaagtatttccggacggagggagta 120
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||| | |||||||||||| |||||||||| |||
Sbjct: 5 tactccctccgtccgcaaatacttgtcctagaaatgaataaaa-ttgatgtatctataac 63
Query: 94 taaaata 100
|||||||
Sbjct: 64 taaaata 70
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacat 113
||||||||||| |||||||||||||||||||||||
Sbjct: 40 ggatgtatctataactaaaatacatctagatacat 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 122 atccattttgatgacaactatttccggacggagggagta 160
||||||||| ||||||| || ||||| ||||||||||||
Sbjct: 43 atccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 81 atgtatctagaactaaaatacatctagatacatc 114
|||||||||||||||||||||| |||||||||||
Sbjct: 74 atgtatctagaactaaaatacaactagatacatc 41
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||| | | ||||| |||| || || ||||||||| |||
Sbjct: 120 tactccctccgtccggaaatacttgacctaaaaataaatataatgg-atgtatctataac 62
Query: 94 taaaatacatctagatacatcc 115
||||||| ||||||| |||||
Sbjct: 61 taaaataagtctagattcatcc 40
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatg 69
|||||||||||||||| |||||||||||| | ||||||
Sbjct: 2 tactactccctccgtctaaaaatacttgtcctaaaaatg 40
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 32 actactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctaga 91
|||||||| |||||||| || |||||||| |||| |||||| | |||||||||||
Sbjct: 3 actactccgtccgtccggaattacttgtcgcacaaatatataaaaatgaatgtatctaga 62
Query: 92 actaaaatacatctagatacat 113
||||||||| ||||||||||||
Sbjct: 63 actaaaatatatctagatacat 84
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||||||| |||||||||||||
Sbjct: 40 ggatgtatctagaactaaaatatgtctagatacatcc 76
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||| |||||| |||||||||||||||||||||||||
Sbjct: 76 ggatatatctaaaactaaaatacatctagatacatcc 40
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 58.0 bits (29), Expect = 5e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctag 90
||||||||||||||| | ||||||||||| |||||||||| || ||||| |||||
Sbjct: 124 tactactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaa 65
Query: 91 aactaaaatacatctagatacatcc 115
|||||||||| |||| ||||||||
Sbjct: 64 aactaaaatatgtctaaatacatcc 40
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
|||| |||||||||||||||||| |||||||||||||
Sbjct: 40 ggatctatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||| ||||||||||||| | || || ||||||| ||||||| || |||
Sbjct: 5 tactccctccgtcagaaaatacttgtcctaaagataaataaaa--tgatgtatgtataac 62
Query: 94 taaaatacatctagatacat 113
||||||| |||||||||||
Sbjct: 63 taaaataagtctagatacat 82
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 5e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||| |||||||||||||||||||| | |||| ||||||| ||| ||||| || |||
Sbjct: 120 tactccatccgtccgaaaatacttgtcctagaaataaataaaatggg-tgtatttataac 62
Query: 94 taaaatacatctagatacatc 114
||||||| |||| |||||||
Sbjct: 61 taaaataattctacatacatc 41
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 5e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| ||||||||||| ||||||||| || ||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcccagaaatgaatataa-tggatgtatctataac 63
Query: 94 taaaatacatctagata 110
||||||| ||||||||
Sbjct: 64 taaaataagtctagata 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 134 gacaactatttccggacggagggagta 160
||||| |||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgt 59
||||||||||||||| ||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 135 acaactatttccggacggagggagta 160
|||| |||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||||||||||| ||||||||||| | ||||||||| || | ||||||||| |||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaatataatag-atgtatctataac 63
Query: 94 taaaatacatctagatacat 113
||||||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgtcatcaaaatgaat 72
||||||||||||| || ||||||||||| | |||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaat 82
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtc 60
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtc 31
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 81 atgtatctagaactaaaatacatctagatacatc 114
|||||| |||||||||||||| ||||||||||||
Sbjct: 74 atgtatttagaactaaaatacgtctagatacatc 41
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 81 atgtatctagaactaaaatacatctagatacatcc 115
|||||| |||||||||||| |||||||||||||||
Sbjct: 52 atgtatttagaactaaaatgcatctagatacatcc 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 32 actactccctccgtccgaaaatacttgtc 60
||||||||||||||| |||||||||||||
Sbjct: 123 actactccctccgtcagaaaatacttgtc 95
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
||||||||||||||| || ||||||||| ||||||| | | || | |||||| ||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 94 taaaata 100
|||||||
Sbjct: 61 taaaata 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 123 tccattttgatgacaactatttccggacggagggagta 160
||||||||| |||||| || ||||||||||||||||||
Sbjct: 84 tccattttggtgacaagtaattccggacggagggagta 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 122 atccattttgatgacaactatttccggacggagggagtaat 162
||||||||| ||| ||| || ||||||||||||||||||||
Sbjct: 43 atccatttttatgtcaagtaattccggacggagggagtaat 3
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 81 atgtatctagaactaaaatacatctagatacat 113
|||||||||||| ||||||| ||||||||||||
Sbjct: 42 atgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 gtatctagaactaaaatacatctagata 110
|||| |||||||||||||||||||||||
Sbjct: 44 gtatttagaactaaaatacatctagata 71
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
|||||| |||||||||||||||||||| | ||||| ||| || ||||||||||| ||
Sbjct: 5 tactccatccgtccgaaaatacttgtcctaaaaatacatataa-tggatgtatctacaat 63
Query: 94 taaaatacatctagatacat 113
|| |||| |||||||||||
Sbjct: 64 tagaataagtctagatacat 83
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 81 atgtatctagaactaaaatacatctagatacatcc 115
|||||||||||||||||| | |||||||||||||
Sbjct: 82 atgtatctagaactaaaactcgtctagatacatcc 48
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 33 ctactccctccgtccgaaaatacttgt 59
|||||||||||||||| ||||||||||
Sbjct: 121 ctactccctccgtccggaaatacttgt 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 135 acaactatttccggacggagggagta 160
|||| |||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacat 113
|||||||| |||||||||||||| |||| ||||||
Sbjct: 50 ggatgtatgtagaactaaaatacgtctaaatacat 84
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaactaaaatacatctagatacat 113
|||||||||||| ||| |||||| |||||||||||
Sbjct: 40 ggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 31 tactactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctag 90
|||||||||||| |||||||||| ||||| | ||||| ||| || ||||||||| |
Sbjct: 2 tactactccctctatccgaaaatatttgtcctagaaatggatataa-tggatgtatccat 60
Query: 91 aactaaaatacatctagatacat 113
|||||||||| || |||||||||
Sbjct: 61 aactaaaataaatttagatacat 83
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 tactactccctccgtccgaaaatacttgtc 60
|||||||||||||||||| ||| |||||||
Sbjct: 121 tactactccctccgtccggaaaaacttgtc 92
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 79 ggatgtatctagaact-aaaatacatctagatacatcc 115
|||||||||||||||| ||||| | |||||||||||||
Sbjct: 41 ggatgtatctagaactaaaaatgcgtctagatacatcc 78
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 34 tactccctccgtccgaaaatacttgt 59
||||||||||||||| ||||||||||
Sbjct: 137 tactccctccgtccggaaatacttgt 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 135 acaactatttccggacggagggagta 160
|||| |||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
