miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 168 bits (85), Expect = 7e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 64
Query: 61 cttatattagtttacagagggagta 85
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 133 bits (67), Expect = 4e-31
Identities = 76/79 (96%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 86 tccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtctt 27
Query: 64 atattagtttacagaggga 82
|||||||||||||||||||
Sbjct: 26 atattagtttacagaggga 8
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 151 bits (76), Expect = 2e-36
Identities = 85/87 (97%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 tattccctctgtaaactaatataagaccttttagatcactaa--agtagtgatctaaaag 58
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tattccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaag 64
Query: 59 gtcttatattagtttacagagggagta 85
|||||||||||||||||||||||||||
Sbjct: 65 gtcttatattagtttacagagggagta 91
Score = 123 bits (62), Expect = 4e-28
Identities = 77/81 (95%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcacta--aagtagtgatctaaaaggtc 61
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 88 tccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaaggtc 29
Query: 62 ttatattagtttacagaggga 82
|||||||||||||||||||||
Sbjct: 28 ttatattagtttacagaggga 8
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 115 bits (58), Expect = 9e-26
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||
Sbjct: 86 tccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgctctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 91.7 bits (46), Expect = 1e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | ||||||||||| ||||||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgctctt 67
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 107 bits (54), Expect = 2e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | |||||||||||||| |||| ||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgctctt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 68 atattagtttacggagggagta 89
Score = 91.7 bits (46), Expect = 1e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | ||||||| |||| |||||||||||| | ||||
Sbjct: 86 tccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgctctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 107 bits (54), Expect = 2e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgctctt 67
Query: 64 atattagtttacagagggagta 85
||||||||| ||| ||||||||
Sbjct: 68 atattagttcaca-agggagta 88
Score = 87.7 bits (44), Expect = 2e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 14 aactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagttt 73
||||||||||||| | |||||||||||| |||||||||||| | ||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 74 acagagggagta 85
||||||||||||
Sbjct: 16 acagagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| ||||| ||||||||| | |||||||||||||||||||||||| || | ||||
Sbjct: 86 tccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgctctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | || ||||||||| |||||||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
||||| ||||| |||||||||
Sbjct: 68 atatttctttacggagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||| | | ||||||||||||||||||| ||||||| ||||
Sbjct: 86 tccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacactctt 27
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 26 atattagtttacggagggagta 5
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| ||||||| |||| |||||||||||| | | ||
Sbjct: 8 tccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgttttt 67
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | ||||| |||||||| |||||||||||| | ||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
||||||||||||||||| ||||
Sbjct: 68 atattagtttacagaggaagta 89
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 6 cctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttat 65
||||||||||||||||||||| | |||||||||||| |||||| ||||| | ||||||
Sbjct: 84 cctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttat 25
Query: 66 attagtttacagagggagta 85
|||||||||| |||||||||
Sbjct: 24 attagtttacggagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | ||||||| |||||||||||| |||||| | | ||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgctttt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||||| |||||||
Sbjct: 68 atattagtttacagggggagta 89
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||| |||||||||||||||| | | |||||| ||||| |||| ||||||| | ||||
Sbjct: 86 tccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 99.6 bits (50), Expect = 5e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | |||||| |||||| |||||||||||| | ||||
Sbjct: 86 tccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgctctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | |||||||||||| |||| |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgctctt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 68 atattagtttacggagggagta 89
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 97.6 bits (49), Expect = 2e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaa 56
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8 tccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 79.8 bits (40), Expect = 5e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 30 tttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 85
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 95.6 bits (48), Expect = 9e-20
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 6 cctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttat 65
||||||||||||||||||| | | ||||||||||||| ||||||||||||| | ||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaa-gtagtgatctaaatgctcttat 67
Query: 66 attagtttacagagggagta 85
|||||||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
Score = 73.8 bits (37), Expect = 3e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | ||||||||||| | |||||||||||| | | ||
Sbjct: 84 tccctccgtaaactaatataagagcatttagatcact-acttagtgatctaaatgctttt 26
Query: 64 atattagtttacagagg 80
|||||||||||||||||
Sbjct: 25 atattagtttacagagg 9
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 91.7 bits (46), Expect = 1e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||| | | |||||| |||||| |||||||||||| | ||||
Sbjct: 8 tccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgttctt 67
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | |||||||||||| |||| |||||| | | ||
Sbjct: 86 tccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgctttt 27
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 26 atattagtttacggagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 91.7 bits (46), Expect = 1e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||| | ||||| || |||||| |||||||||||| ||||
Sbjct: 86 tccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacactctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 75.8 bits (38), Expect = 8e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| |||||||||||| |||| || ||||| | ||
Sbjct: 8 tccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaactttt 67
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 91.7 bits (46), Expect = 1e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 8 tctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatat 67
||||||||||| ||||||| | ||||||||||||||||||| ||||||| | ||||||||
Sbjct: 82 tctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctcttatat 23
Query: 68 tagtttacagagggagta 85
|| ||||| |||||||||
Sbjct: 22 taatttacggagggagta 5
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| ||||| |||||||||| | ||||||| |||| |||||||||||| | ||||
Sbjct: 8 tccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgctctt 67
Query: 64 atattagtttacagagggagta 85
||| ||||||||||| ||||||
Sbjct: 68 atagtagtttacagacggagta 89
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 5e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 1 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60
||||||||| |||||||||||||||| | |||||| ||||||||| ||||||||| | |
Sbjct: 5 tattccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgct 64
Query: 61 cttatattagtttacagagggagta 85
||||||||||||||| ||||||||
Sbjct: 65 tttatattagtttacaaagggagta 89
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||| ||||||||||||||| | | ||||||||| || |||| |||||| | ||||
Sbjct: 86 tccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgctctt 27
Query: 64 atattagtttacagaggga 82
|||||||||||| ||||||
Sbjct: 26 atattagtttacggaggga 8
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 89.7 bits (45), Expect = 5e-18
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||||||||| |||||||||| | ||| |||||||||| |||||||||||| | ||||
Sbjct: 8 tccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgctctt 67
Query: 64 atattagtttacagagg 80
|||||||||||| ||||
Sbjct: 68 atattagtttacggagg 84
Score = 79.8 bits (40), Expect = 5e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 6 cctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttat 65
|||| |||||||||||||||| | |||||||||||| |||||||| ||| | ||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 66 attagtttacagagggagta 85
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | |||||||||||||| |||||||| ||| ||||
Sbjct: 86 tccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactctt 27
Query: 64 atattagtttacagagggagta 85
|||||| ||||| |||||||||
Sbjct: 26 atattaatttacggagggagta 5
Score = 65.9 bits (33), Expect = 8e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| ||||| |||||||||| ||| |||||||| |||||||||||| | ||||
Sbjct: 8 tccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgctctt 67
Query: 64 atattagtttacagagggagt 84
|||||||||||| ||||||||
Sbjct: 68 atattagtttactgagggagt 88
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | |||| |||| |||| |||||||||||| ||||
Sbjct: 86 tccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacactctt 27
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 26 atattagtttacggagggagta 5
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| |||||||||||| || |||| |||| | ||||
Sbjct: 8 tccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 68 atattagtttaccgagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||| ||||| ||||||||| |||||||||||||| ||||| |||||| | ||||
Sbjct: 8 tccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgctctt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 68 atattagtttacggagggagta 89
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | |||||| ||||| |||||||||||| ||||
Sbjct: 86 tccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacactctt 27
Query: 64 atattagtttacagagggagta 85
||||| ||||| ||||||||||
Sbjct: 26 atattggtttatagagggagta 5
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 taaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagt 71
||||||||||||||| | ||||||| | |||| |||||||||||| | | ||||||||||
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatattagt 19
Query: 72 ttacagagggagta 85
||||||||||||||
Sbjct: 18 ttacagagggagta 5
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||| | | |||||||||||| || | ||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
||||||||||| |||||||||
Sbjct: 68 atattagtttatggagggagta 89
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | ||||||| ||| |||||||| |||||| | ||||
Sbjct: 8 tccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
||||||||||| |||||||||
Sbjct: 68 atattagtttatggagggagta 89
Score = 60.0 bits (30), Expect = 5e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 12 taaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagt 71
||||||||||||||| | |||||| ||||| ||| ||||||| | ||||||||||||
Sbjct: 78 taaactaatataagagcatttagaacactacttcagtaatctaaatgttcttatattagt 19
Query: 72 ttacagagggagta 85
|||| |||||||||
Sbjct: 18 ttacggagggagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 83.8 bits (42), Expect = 3e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 taaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagt 71
||||||||||||| | | ||||||||| ||| ||||||||||||| | ||||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaa-gtagtgatctaaatgctcttatattagt 74
Query: 72 ttacagagggagta 85
||||||||||||||
Sbjct: 75 ttacagagggagta 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| | ||||||||||| | || ||||||||| | | ||
Sbjct: 85 tccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgctttt 27
Query: 64 atattagttta 74
|||||||||||
Sbjct: 26 atattagttta 16
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 79.8 bits (40), Expect = 5e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 1 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60
|||||||| ||||||||||||||||| | || |||||| |||| | |||||||||| |
Sbjct: 5 tattccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactct 64
Query: 61 cttatattagtttacagagggagt 84
||||||||||||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagt 88
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| |||||||||| | || |||||| || | ||||
Sbjct: 86 tccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctctt 27
Query: 64 atattagtttacagaggga 82
||||||||||||| |||||
Sbjct: 26 atattagtttacaaaggga 8
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 79.8 bits (40), Expect = 5e-15
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| ||||||| |||||| ||||| |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgctctt 67
Query: 64 atattagtttac 75
||||||||||||
Sbjct: 68 atattagtttac 79
Score = 73.8 bits (37), Expect = 3e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 1 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60
|||||||| |||||||||||||||| | |||||| ||||| |||| ||||||| |
Sbjct: 89 tattcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatact 30
Query: 61 cttatattagtttacagagggagta 85
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 79.8 bits (40), Expect = 5e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 6 cctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttat 65
|||||||||| ||||||||| | ||||||||||| ||||||||||||||| | ||||||
Sbjct: 10 cctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttat 69
Query: 66 attagtttacagaggg 81
||| |||||||||||
Sbjct: 70 atttctttacagaggg 85
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 5 ccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctta 64
||||||||||| ||||||||| | |||||||||||| ||||||||||| | |||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 65 tattagtttacagagggagta 85
|||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 79.8 bits (40), Expect = 5e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | ||||||||| |||| |||||||||||| | ||||
Sbjct: 131 tccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgctctt 72
Query: 64 atattagt 71
||||||||
Sbjct: 71 atattagt 64
Score = 69.9 bits (35), Expect = 5e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 15 actaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagttta 74
|||||||||||| | |||||||||||| || ||||||||| | |||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 75 cagagggagta 85
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 56.0 bits (28), Expect = 7e-08
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 30 tttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 85
||||||||| |||| | ||| ||||| | ||||||||||||||||||||||||||
Sbjct: 60 tttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataaga 26
|||||||||||||||||||||||
Sbjct: 8 tccctctgtaaactaatataaga 30
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 73.8 bits (37), Expect = 3e-13
Identities = 76/88 (86%), Gaps = 7/88 (7%)
Strand = Plus / Plus
Query: 5 ccctctgtaaactaatataagaccttttagatcactaaagtagt--gatct-----aaaa 57
|||||||||||||||||||||| | |||||||||||||| |||| ||||| |||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaatagtgagatctaaatgaaac 68
Query: 58 ggtcttatattagtttacagagggagta 85
| ||||||||||||||||||||||||||
Sbjct: 69 gctcttatattagtttacagagggagta 96
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 45 tagtgatctaaaaggtcttatattagtttacagaggg 81
|||||||||||| | ||||||||||||||||||||||
Sbjct: 45 tagtgatctaaatgctcttatattagtttacagaggg 9
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 32 tagatcactaaagtagtgatctaaaaggtcttatattagtttacagag 79
||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 58 tagatcactaaagtagtgatctaaacgctcttatatttgtttacagag 11
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 7 ctctgtaaactaatataagaccttttagatcactaaagtagtgatcta 54
|||||||||| ||||||||| | |||||||||||| ||||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatcta 58
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 30 tttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 85
||||||||||||||||||| ||||||| | ||||||||| |||||||||||||||
Sbjct: 34 tttagatcactaaagtagttatctaaatgatcttatatttctttacagagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||||||||| ||||||||| | ||||||| |||| |||||||||||| ||||
Sbjct: 86 tccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacattctt 27
Query: 64 atattagtttacagagggagta 85
||||| | ||| |||||||||
Sbjct: 26 atatttctgtacggagggagta 5
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 71.9 bits (36), Expect = 1e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 30 tttagatcactaaagtagtgatctaaaaggtcttatattagtttacagagggagta 85
||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 32 tttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagta 87
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 69.9 bits (35), Expect = 5e-12
Identities = 71/82 (86%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||||| ||||||| |||||| |||| |||||| | | ||
Sbjct: 8 tccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgctatt 65
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 66 atattagtttacggagggagta 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||| | | |||||| |||| |||| ||||||| ||||
Sbjct: 84 tccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacactctt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 69.9 bits (35), Expect = 5e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||| |||||||| | |||||||| ||||| |||||||||||| | ||||
Sbjct: 8 tccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgctctt 67
Query: 64 atattagtttacagaggga 82
||||| ||||| ||||||
Sbjct: 68 atatttctttactgaggga 86
Score = 60.0 bits (30), Expect = 5e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| ||||| ||||||||| | |||||||||||| ||| |||||||| | |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 64 atattagtttacagagggagta 85
||||| ||||||||||||||||
Sbjct: 26 atatttgtttacagagggagta 5
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 69.9 bits (35), Expect = 5e-12
Identities = 71/82 (86%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||| | ||||||| |||||| |||| |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgctctt 65
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 66 atattagtttacggagggagta 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| |||||||||||||||| | |||||| |||| |||| ||||||| | ||
Sbjct: 84 tccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacactttt 27
Query: 64 atattagtttacagagggagta 85
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||| ||||| ||||||||| | |||||| |||||||||||| ||||||| | ||||
Sbjct: 8 tccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgctctt 67
Query: 64 atattagtttacagagggagta 85
||||| |||| ||||||||||
Sbjct: 68 atatttctttatagagggagta 89
>RF00906;MIR1122;AJ313099.1/1401-1309 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||| |||||| ||||||| |||||| ||||||||||||| |||||| ||||
Sbjct: 86 tccctctataaacttttataagaaattttaggccactaaagtagtggcctaaaacatctt 27
Query: 64 atattagtttacagagggagta 85
||| |||||||||||||||||
Sbjct: 26 ataaaagtttacagagggagta 5
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 8 tctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatat 67
|||||||| ||||||||| | | ||||||||||||||||| ||||||| ||||||||
Sbjct: 12 tctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacactcttatat 71
Query: 68 tagtttacagagggagta 85
| ||||| |||||||||
Sbjct: 72 ttctttacggagggagta 89
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 54.0 bits (27), Expect = 3e-07
Identities = 71/85 (83%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcacta---aagtagtgatctaaaaggt 60
||||| |||||| |||||||||| | |||||||||||| |||||||||||||| | |
Sbjct: 89 tccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaacgct 30
Query: 61 cttatattagtttacagagggagta 85
|| ||||| || ||||||||||||
Sbjct: 29 ctcatatttattcacagagggagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 45 tagtgatctaaaaggtcttatattagtttacagagggagta 85
|||||||||||| | |||||||||| |||||| ||||||||
Sbjct: 52 tagtgatctaaacgctcttatattattttacatagggagta 92
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 68/82 (82%), Gaps = 6/82 (7%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||||||||| ||||||||| | |||||||||||| ||||||||| | ||||
Sbjct: 80 tccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgctctt 27
Query: 64 atattagtttacagagggagta 85
||||| |||||||||||||||
Sbjct: 26 atatttctttacagagggagta 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 68/82 (82%), Gaps = 6/82 (7%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
|||||||||||| ||||||||| | ||||||||| |||||||||||| | ||||
Sbjct: 8 tccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgctctt 61
Query: 64 atattagtttacagagggagta 85
||||| |||||||||||||||
Sbjct: 62 atatttctttacagagggagta 83
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
||||||||||||||||||||| | | |||| || |||||| || || | |||| | ||
Sbjct: 8 tccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataatttt 67
Query: 64 atattagtttacagagggagta 85
|||||||||||| |||||||||
Sbjct: 68 atattagtttacggagggagta 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 62 ttatattagtttacagagggagta 85
||||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagta 5
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 60 tcttatattagtttacagagggagta 85
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataaga 26
|||||||||||||||||||||||
Sbjct: 8 tccctctgtaaactaatataaga 30
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tcttatattagtttacagagggagta 85
|||||||||||||||| |||||||||
Sbjct: 37 tcttatattagtttacggagggagta 62
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 60 tcttatattagtttacagagggagta 85
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataaga 26
|||||||||||||||||||||||
Sbjct: 8 tccctctgtaaactaatataaga 30
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tcttatattagtttacagagggagta 85
|||||||||||||||| |||||||||
Sbjct: 49 tcttatattagtttaccgagggagta 74
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 45 tagtgatctaaaaggtcttatattagtttacagagggagta 85
|||||||||||| | ||||||||| |||||||||||||||
Sbjct: 45 tagtgatctaaacgatcttatatttctttacagagggagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagt 48
|||||||||||| ||||||||| | |||||||||||||| ||||
Sbjct: 8 tccctctgtaaagaaatataagatcgtttagatcactaaaatagt 52
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 46.1 bits (23), Expect = 7e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 45 tagtgatctaaaaggtcttatattagtttacagagggag 83
|||||||||||| | ||||||||| |||||||||||||
Sbjct: 38 tagtgatctaaatgatcttatatttctttacagagggag 76
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tccctctgtaaactaatataagaccttttagatcacta 41
|||||||||||| ||||||||| | ||||||||||||
Sbjct: 75 tccctctgtaaagaaatataagatcatttagatcacta 38
