miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41593_vvi-MIR167c:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 cagtagcagttgaagctgccagcatgatctcaacttccctatacaagtcaaggaaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtagcagttgaagctgccagcatgatctcaacttccctatacaagtcaaggaaagatc 60
Query: 61 agatcatgtggtagcctcacctgttgatggg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 agatcatgtggtagcctcacctgttgatggg 91
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 4 tagcagttgaagctgccagcatgatctcaacttcc 38
||||||||||||||||||||||||||| |||||||
Sbjct: 14 tagcagttgaagctgccagcatgatctaaacttcc 48
>40446_gma-MIR167f:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatctcaacttccct 40
|||||||||||||||||||||||| |||||||||
Sbjct: 15 cagttgaagctgccagcatgatcttaacttccct 48
>40445_gma-MIR167e:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatctcaacttccct 40
|||||||||||||||||||||||| |||||||||
Sbjct: 15 cagttgaagctgccagcatgatcttaacttccct 48
>41533_sly-MIR167:mirbase
Length = 116
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 tagcagttgaagctgccagcatgatctcaactt 36
||||||||||||||||||||||||||| |||||
Sbjct: 12 tagcagttgaagctgccagcatgatctaaactt 44
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tagcagttgaagctgccagcatgatct 30
|||||||||||||||||||||||||||
Sbjct: 4 tagcagttgaagctgccagcatgatct 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 51 aggaaagatcagatcatgtggtagcctcacctgttgatgg 90
|||||||| ||||||||||| || ||||||||||||||
Sbjct: 59 aggaaagactagatcatgtggcagtttcacctgttgatgg 98
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tagcagttgaagctgccagcatgatct 30
|||||||||||||||||||||||||||
Sbjct: 4 tagcagttgaagctgccagcatgatct 30
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tagcagttgaagctgccagcatgatct 30
|||||||||||||||||||||||||||
Sbjct: 4 tagcagttgaagctgccagcatgatct 30
>41280_ctr-MIR167:mirbase
Length = 121
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 agtagcagttgaagctgccagcatgatctcaactt 36
||||| ||||||||||||||||||||||| |||||
Sbjct: 15 agtagtagttgaagctgccagcatgatctgaactt 49
>41227_csi-MIR167a:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 agtagcagttgaagctgccagcatgatctcaactt 36
||||| ||||||||||||||||||||||| |||||
Sbjct: 6 agtagtagttgaagctgccagcatgatctgaactt 40
>41209_ccl-MIR167b:mirbase
Length = 202
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 agtagcagttgaagctgccagcatgatctcaactt 36
||||| ||||||||||||||||||||||| |||||
Sbjct: 12 agtagtagttgaagctgccagcatgatctgaactt 46
>41208_ccl-MIR167a:mirbase
Length = 121
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 agtagcagttgaagctgccagcatgatctcaactt 36
||||| ||||||||||||||||||||||| |||||
Sbjct: 15 agtagtagttgaagctgccagcatgatctgaactt 49
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatctcaactt 36
|||||||||||||||||||||||| |||||
Sbjct: 7 cagttgaagctgccagcatgatctaaactt 36
>41345_ptc-MIR167g:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatctcaacttccct 40
|||||||||||||||||||||||| ||| |||||
Sbjct: 7 cagttgaagctgccagcatgatcttaacctccct 40
>40632_gso-MIR167a:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||||||||||||||||||||||||
Sbjct: 3 agcagttgaagctgccagcatgatct 28
>40447_gma-MIR167g:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||||||||||||||||||||||||
Sbjct: 2 agcagttgaagctgccagcatgatct 27
>41343_ptc-MIR167e:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatctcaactt 36
||||||||||||||||||||||| |||||
Sbjct: 8 agttgaagctgccagcatgatctgaactt 36
>40401_ahy-MIR167:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatctcaactt 36
||||||||||||||||||||||| |||||
Sbjct: 18 agttgaagctgccagcatgatcttaactt 46
>40400_ahy-MIR167:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatctcaactt 36
||||||||||||||||||||||| |||||
Sbjct: 18 agttgaagctgccagcatgatcttaactt 46
>41344_ptc-MIR167f:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
>41100_tcc-MIR167c:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 17 cagttgaagctgccagcatgatct 40
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 48 tcaaggaaagatcagatcatgtggtagcctcacctgttg 86
|||||||||||||||||||| ||| || ||||||||||
Sbjct: 59 tcaaggaaagatcagatcatatggcagtttcacctgttg 97
>40353_rco-MIR167b:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 cagttgaagctgccagcatgatct 30
||||||||||||||||||||||||
Sbjct: 2 cagttgaagctgccagcatgatct 25
>40645_lja-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatct 40
>40354_rco-MIR167c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agttgaagctgccagcatgatct 30
|||||||||||||||||||||||
Sbjct: 3 agttgaagctgccagcatgatct 25
>42738_zma-MIR167h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 19 gttgaagctgccagcatgatct 40
>42736_zma-MIR167f:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||| ||||||||||||||||||||
Sbjct: 15 agcagctgaagctgccagcatgatct 40
>42525_sbi-MIR167g:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||| ||||||||||||||||||||
Sbjct: 15 agcagctgaagctgccagcatgatct 40
>42521_sbi-MIR167c:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 18 gttgaagctgccagcatgatct 39
>41960_osa-MIR167j:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||| ||||||||||||||||||||
Sbjct: 20 agcagctgaagctgccagcatgatct 45
>41957_osa-MIR167g:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 agcagttgaagctgccagcatgatct 30
||||| ||||||||||||||||||||
Sbjct: 5 agcaggtgaagctgccagcatgatct 30
>41752_bdi-MIR167d:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 29 gttgaagctgccagcatgatct 50
>41591_vvi-MIR167a:mirbase
Length = 351
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>41228_csi-MIR167b:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tgaagctgccagcatgatctcaactt 36
|||||||||||||||||||| |||||
Sbjct: 20 tgaagctgccagcatgatcttaactt 45
>40443_gma-MIR167c:mirbase
Length = 375
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gttgaagctgccagcatgatct 30
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>40041_ath-MIR167c:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 1 cagtagcagttgaagctgccagcatgatct 30
||||||||||| ||||||||||||||||||
Sbjct: 2 cagtagcagtt-aagctgccagcatgatct 30
>39830_aly-MIR167c:mirbase
Length = 159
Score = 44.1 bits (22), Expect = 2e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 1 cagtagcagttgaagctgccagcatgatct 30
||||||||||| ||||||||||||||||||
Sbjct: 1 cagtagcagtt-aagctgccagcatgatct 29
>42739_zma-MIR167i:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 20 ttgaagctgccagcatgatct 40
>41229_csi-MIR167c:mirbase
Length = 341
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttgaagctgccagcatgatct 30
|||||||||||||||||||||
Sbjct: 10 ttgaagctgccagcatgatct 30
