miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccgccatcagcagcaagcattgaagctttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggtggatttgagccaaggatgacttgccgccatcagcagcaagcattgaagctttaac 60
Query: 61 tgggcatggacagcgagttattcttggctcatgcggcccctct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggcatggacagcgagttattcttggctcatgcggcccctct 103
>41608_vvi-MIR169l:mirbase
Length = 103
Score = 117 bits (59), Expect = 2e-27
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccgccatcagcagcaagcattgaagctttaac 60
|||||||| |||||||||||||||||||||| | | ||| |||||||||||||||||||
Sbjct: 1 agggtggaattgagccaaggatgacttgccgtcctttgcatcaagcattgaagctttaac 60
Query: 61 tgggcatggacagcgagttattcttggctcatgcggcccctct 103
|||||||| || || ||||||||||||||||| |||||||||
Sbjct: 61 tgggcatgcacggctagttattcttggctcatttggcccctct 103
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 gtggatttgagccaaggatgacttgccgc 32
|||||||||||||||||||||||||||||
Sbjct: 4 gtggatttgagccaaggatgacttgccgc 32
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 4 gtggatttgagccaaggatgacttgccgccatcagcagcaag 45
||||| |||||||||||||||||||||| || | ||||||||
Sbjct: 4 gtggaattgagccaaggatgacttgccggcagctgcagcaag 45
>41598_vvi-MIR169b:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccgccatcagcagcaag 45
|||||||||||||| ||||||| |||| ||||||||
Sbjct: 10 ttgagccaaggatggcttgccgtcatctgcagcaag 45
>40452_gma-MIR169d:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggatttgagccaaggatgacttgccg 31
|||||| |||||||||||||||||||||
Sbjct: 7 gtggatgtgagccaaggatgacttgccg 34
>41617_vvi-MIR169u:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccg 31
|||||||| ||||| ||||||||||||||||
Sbjct: 1 agggtggaattgagtcaaggatgacttgccg 31
>41614_vvi-MIR169r:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccg 31
|||||||| ||||| ||||||||||||||||
Sbjct: 1 agggtggaattgagtcaaggatgacttgccg 31
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccg 31
|||||||| | ||||||||||||||||||||
Sbjct: 1 agggtggaatagagccaaggatgacttgccg 31
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 11 tgagccaaggatgacttgccgccatcagcagcaag 45
||||||||||||||||||||| || | ||||||||
Sbjct: 11 tgagccaaggatgacttgccggcagctgcagcaag 45
>41605_vvi-MIR169i:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccg 31
|||||||| ||||||||||||||||| ||||
Sbjct: 1 agggtggaattgagccaaggatgactggccg 31
>41604_vvi-MIR169h:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 agggtggatttgagccaaggatgacttgccg 31
|||||||| |||||||||||||| |||||||
Sbjct: 1 agggtggaattgagccaaggatggcttgccg 31
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tttgagccaaggatgacttgccg 31
|||||||||||||||||||||||
Sbjct: 19 tttgagccaaggatgacttgccg 41
>40453_gma-MIR169e:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tttgagccaaggatgacttgccg 31
|||||||||||||||||||||||
Sbjct: 30 tttgagccaaggatgacttgccg 52
>40050_ath-MIR169f:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tggatttgagccaaggatgacttgccg 31
|||| ||||||||||||||||||||||
Sbjct: 26 tggaattgagccaaggatgacttgccg 52
>39839_aly-MIR169f:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tggatttgagccaaggatgacttgccg 31
|||| ||||||||||||||||||||||
Sbjct: 35 tggaattgagccaaggatgacttgccg 61
>41610_vvi-MIR169n:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 gagccaaggatgacttgccgccatcagcagcaag 45
|||||||||||||||||||| || | ||||||||
Sbjct: 12 gagccaaggatgacttgccggcaactgcagcaag 45
>40358_rco-MIR169c:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgagccaaggatgacttgccgc 32
||||||||||||||||||||||
Sbjct: 6 tgagccaaggatgacttgccgc 27
>40051_ath-MIR169g:mirbase
Length = 379
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 143 ttgagccaaggatgacttgccg 164
>40049_ath-MIR169e:mirbase
Length = 217
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 68 ttgagccaaggatgacttgccg 89
>40048_ath-MIR169d:mirbase
Length = 154
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 40 ttgagccaaggatgacttgccg 61
>39840_aly-MIR169g:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 62 ttgagccaaggatgacttgccg 83
>39838_aly-MIR169e:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 50 ttgagccaaggatgacttgccg 71
>39837_aly-MIR169d:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccg 31
||||||||||||||||||||||
Sbjct: 40 ttgagccaaggatgacttgccg 61
>40692_mtr-MIR169o:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gatttgagccaaggatgacttgccg 31
|||||||||||| ||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccg 26
>40691_mtr-MIR169n:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gatttgagccaaggatgacttgccg 31
|||||||||||| ||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccg 26
>40686_mtr-MIR169i:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gatttgagccaaggatgacttgccg 31
|||||||||||| ||||||||||||
Sbjct: 2 gatttgagccaaagatgacttgccg 26
>40685_mtr-MIR169h:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gatttgagccaaggatgacttgccg 31
|||||||||||| ||||||||||||
Sbjct: 1 gatttgagccaaagatgacttgccg 25
>40356_rco-MIR169a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgccatca 37
||||||||||||||||||| |||||
Sbjct: 7 agccaaggatgacttgccggcatca 31
>41615_vvi-MIR169s:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 gtggatttgagccaaggatgacttgccg 31
||||||| |||||||||||||||||||
Sbjct: 5 gtggattgcagccaaggatgacttgccg 32
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 gagccaaggatgacttgccg 31
||||||||||||||||||||
Sbjct: 6 gagccaaggatgacttgccg 25
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 gagccaaggatgacttgccg 31
||||||||||||||||||||
Sbjct: 7 gagccaaggatgacttgccg 26
