miRNEST 2.0, an integrative microRNA resource :: BLAST
>48567_gma-miR171a:pmrd
Length = 102
Score = 99.6 bits (50), Expect = 4e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 8 acgggatattggtgcggttcaataagaaagcagtgctcgcaatctttttgagttctggtt 67
||||||||||||| |||||||||||||||||| ||||| ||| |||||| || ||| ||
Sbjct: 6 acgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgttt 65
Query: 68 tttgattgagccgtgccaatatcacg 93
||| ||||||||||||||||||||||
Sbjct: 66 tttcattgagccgtgccaatatcacg 91
>48565_gma-miR170m:pmrd
Length = 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 11 ggatattggtgcggttcaataagaaagcagtgctcgcaatctttttgagttctggttttt 70
|||||||||| |||||||||||||||||| ||||| ||| |||||| || ||| |||||
Sbjct: 1 ggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgtttttt 60
Query: 71 gattgagccgtgccaatatc 90
|||||||||||||||||||
Sbjct: 61 cattgagccgtgccaatatc 80
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 8 acgggatattggtgcggttcaataagaaagcagtgctcgcaatctttttgagttctggtt 67
||||||||||||| ||||||||| |||||| | ||||| ||| | | |||| || |
Sbjct: 1 acgggatattggtacggttcaatcagaaagtaatgctcccaaaagtatagagtactattg 60
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacgt 87
>51684_ptc-miR171a:pmrd
Length = 104
Score = 61.9 bits (31), Expect = 8e-11
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 8 acgggatattggtgcggttcaataagaaagcagtgctcgcaatctttttgagttctggtt 67
||||||||||||| ||||||||| |||||| | ||||| ||| | | |||| || |
Sbjct: 10 acgggatattggtacggttcaatcagaaagtaatgctcccaaaagtatagagtactattg 69
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcacgt 96
>54553_sly-miR171c:pmrd
Length = 121
Score = 60.0 bits (30), Expect = 3e-10
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 12 gatattggtgcggttcaataagaaagcagtgctcgcaatc-tttttgagttctggttttt 70
||||||||||||||||||| |||||||||| || | | ||||||||| || |||||
Sbjct: 20 gatattggtgcggttcaatgagaaagcagtacttaagaacatttttgagt-ctacttttt 78
Query: 71 gattgagccgtgccaatatcacgtgt 96
|||||||||| |||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcacgtgt 104
>55030_zma-miR171c:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 tacgggatattggtgcggttcaataagaaagc 38
|||||||||||||||||||||||| |||||||
Sbjct: 16 tacgggatattggtgcggttcaatcagaaagc 47
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacgt 94
||||| |||||||||||||||||||||
Sbjct: 77 tttgactgagccgtgccaatatcacgt 103
>48896_osa-miR171b:pmrd
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 ttttgattgagccgtgccaatatcacgt 94
||||||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatcacgt 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 acgggatattggtgcggttcaataagaaagc 38
|||||||||||| |||||||||| |||||||
Sbjct: 7 acgggatattggggcggttcaatcagaaagc 37
>54831_vvi-miR171d:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacgt 91
>54462_sbi-miR171k:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacgt 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 cgggatattggtgcggttcaataagaaagc 38
||||||||||| |||||||||| |||||||
Sbjct: 1 cgggatattggcgcggttcaatcagaaagc 30
>51685_ptc-miR171b:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcacgt 95
>48897_osa-miR171c:pmrd
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 8 acgggatattggtgcggttcaataagaaagc 38
||||||||||||||||||||||| |||||||
Sbjct: 7 acgggatattggtgcggttcaatcagaaagc 37
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcacgt 93
>55029_zma-miR171b:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 cgggatattggtgcggttcaataagaaagc 38
||||||||||| |||||||||| |||||||
Sbjct: 1 cgggatattggcgcggttcaatcagaaagc 30
>48403_bra-miR171a:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
>48386_bol-miR171a:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 gatattggtgcggttcaataagaaa 36
||||||||||||||||||| |||||
Sbjct: 10 gatattggtgcggttcaatcagaaa 34
>48367_bna-miR171e:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacg 90
>48366_bna-miR171d:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 gatattggtgcggttcaataagaaa 36
||||||||||||||||||| |||||
Sbjct: 10 gatattggtgcggttcaatcagaaa 34
>46979_ath-miR171c:pmrd
Length = 116
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcacg 93
||||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcacg 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tacgggatattggtgcggttcaataagaaa 36
|||| ||||||||||||||||||| |||||
Sbjct: 24 tacgagatattggtgcggttcaatcagaaa 53
>55037_zma-miR171j:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcacgt 114
>54453_sbi-miR171b:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcacgt 94
|||||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcacgt 117
>54452_sbi-miR171a:pmrd
Length = 161
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcac 92
|||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144
>48312_bdi-miR171c:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatcac 92
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 tattggtgcggttcaataagaaagc 38
||||||||||||||||| |||||||
Sbjct: 6 tattggtgcggttcaatcagaaagc 30
>55036_zma-miR171i:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 ttgattgagccgtgccaatatcac 92
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>55033_zma-miR171f:pmrd
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 ttgattgagccgtgccaatatcac 92
||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>54455_sbi-miR171d:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 63 tggtttttgattgagccgtgccaatatc 90
|||||| |||||||||||||||||||||
Sbjct: 108 tggtttctgattgagccgtgccaatatc 135
>51346_ppe-miR171:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatca 91
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>51345_ppe-miR170:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatca 91
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>48406_bra-miR171d:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacgtgtca 98
||||||||||||||||||||||| ||||
Sbjct: 71 gattgagccgtgccaatatcacgcgtca 98
>48364_bna-miR171b:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacgtgtca 98
||||||||||||||||||||||| ||||
Sbjct: 71 gattgagccgtgccaatatcacgcgtca 98
>46879_aqc-miR171d:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ttttgattgagccgtgccaatatc 90
||||||||||||||||||||||||
Sbjct: 81 ttttgattgagccgtgccaatatc 104
>54552_sly-miR171b:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 gatattggtgcggttcaataagaaagc 38
||||||||||||||||||| |||||||
Sbjct: 5 gatattggtgcggttcaattagaaagc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 attgagccgtgccaatatcacgt 94
|||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacgt 86
>54551_sly-miR171a:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>51692_ptc-miR171i:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>51691_ptc-miR171h:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>51690_ptc-miR171g:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatcac 117
>48900_osa-miR171f:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
>48723_mtr-miR171g:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>48405_bra-miR171c:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacg 93
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>48404_bra-miR171b:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacg 93
|||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcacg 94
>48365_bna-miR171c:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacg 93
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>48363_bna-miR171a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacg 93
|||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcacg 94
>46978_ath-miR171b:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcacg 93
|||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcacg 98
>46881_aqc-miR171f:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 attgagccgtgccaatatcacgt 94
|||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacgt 86
>46880_aqc-miR171e:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>46877_aqc-miR171b:pmrd
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>46876_aqc-miR171a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tttgattgagccgtgccaatatc 90
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 ttgattgagccgtgccaatatc 90
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>55032_zma-miR171e:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 82 gtttctgattgagccgtgccaatatc 107
>55031_zma-miR171d:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 77 gtttctgattgagccgtgccaatatc 102
>55024_zma-miR170m:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 ttgattgagccgtgccaatatc 90
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>54836_vvi-miR171i:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatca 91
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>54828_vvi-miR171a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgtgccaatatca 91
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>54579_smo-miR171a:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgtgccaatatcac 92
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
>54460_sbi-miR171i:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 63 gtttctgattgagccgtgccaatatc 88
>48905_osa-miR171n:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 74 gtttctgattgagccgtgccaatatc 99
>48899_osa-miR171e:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 84 gtttctgattgagccgtgccaatatc 109
>48893_osa-miR170a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 gtttttgattgagccgtgccaatatc 90
|||| |||||||||||||||||||||
Sbjct: 74 gtttctgattgagccgtgccaatatc 99