miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41629_vvi-MIR171h:mirbase
          Length = 96

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tttcacgagatgttggtgcggttcaacctaactgtagtgtccatgaatgtatcgactctg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tttcacgagatgttggtgcggttcaacctaactgtagtgtccatgaatgtatcgactctg 60

                                              
Query: 61 atgtttggttgagccgcgccaatatcccgtctatct 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttggttgagccgcgccaatatcccgtctatct 96




>41116_tcc-MIR171a:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 gtttggttgagccgcgccaatatc 86
          ||||| ||||||||||||||||||
Sbjct: 76 gtttgattgagccgcgccaatatc 99