miRNEST 2.0, an integrative microRNA resource :: BLAST
>42692_zma-MIR159c:mirbase
Length = 217
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 79
Query: 61 ggatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ggatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcat 139
Query: 121 gacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcctc 199
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 285 bits (144), Expect = 6e-78
Identities = 171/179 (95%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 2 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 118
Query: 62 gatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatg 121
||| ||||||||||||||||||| | | ||||||| |||||||||||||||||||||||
Sbjct: 119 gatgcctctctggtgcagcaatgactgatgctcac--ctgcacttgcatgggtgtgcatg 176
Query: 122 acccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcctc 180
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcctc 235
>42454_sof-MIR159c:mirbase
Length = 238
Score = 280 bits (141), Expect = 3e-76
Identities = 171/180 (95%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 1 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 102
Query: 61 ggatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcat 120
|||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||||
Sbjct: 103 ggatgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcat 160
Query: 121 gacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcctc 180
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcctc 220
>42693_zma-MIR159d:mirbase
Length = 217
Score = 262 bits (132), Expect = 8e-71
Identities = 171/182 (93%), Gaps = 4/182 (2%)
Strand = Plus / Plus
Query: 1 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 60
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 20 gaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcat 79
Query: 61 ggatacctctctggtgcagcaatggcc--gctgctcacctctgcacttgcatgggtgtgc 118
||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 80 ggatacctctctggtgcagcaatggccgagatgctcac--ctgcacttgcatgggtgtgc 137
Query: 119 atgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 178
||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctcc 197
Query: 179 tc 180
||
Sbjct: 198 tc 199
>41730_bdi-MIR159:mirbase
Length = 234
Score = 172 bits (87), Expect = 6e-44
Identities = 157/178 (88%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 1 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 61 ggatacctctctggtgca-gcaatggccgctgctcacctctgcacttgcatgggtgtgca 119
|||||||| ||||||||| ||| || | | | ||| |||| ||||| ||| ||||
Sbjct: 87 ggatacctgtctggtgcatgcagtg--tggtaatagcctgcgcacctgcatcggtttgca 144
Query: 120 tgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 177
||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||
Sbjct: 145 tgacccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 109 bits (55), Expect = 7e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 4 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 63
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 64 tacctct 70
|||||||
Sbjct: 73 tacctct 79
>41921_osa-MIR159e:mirbase
Length = 191
Score = 93.7 bits (47), Expect = 4e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 59
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 60 tggatacctct 70
|||||||||||
Sbjct: 70 tggatacctct 80
>41920_osa-MIR159d:mirbase
Length = 189
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 4 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 63
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 64 tacctct 70
|||||||
Sbjct: 73 tacctct 79
>41919_osa-MIR159c:mirbase
Length = 197
Score = 91.7 bits (46), Expect = 2e-19
Identities = 147/178 (82%), Gaps = 7/178 (3%)
Strand = Plus / Plus
Query: 4 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 63
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 64 tacctctctggtgcagcaatggccgc--tgct-cacctctgcacttgcatgggtgtgcat 120
||||||| |||| ||||| || |||| | |||||||||||||||| |||||
Sbjct: 73 tacctctggagtgc----atggcagcaatgctgtaggcctgcacttgcatgggtttgcat 128
Query: 121 gacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 178
|||||||||||||| ||| |||| |||| | || || |||||||||||||||||||
Sbjct: 129 gacccgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41302_ptc-MIR159d:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 cttggattgaagggagctcct 179
|||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcct 185
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 156 gtgcttggattgaagggagctcct 179
||||||||| ||||||||||||||
Sbjct: 172 gtgcttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 156 gtgcttggattgaagggagctcct 179
||||||||| ||||||||||||||
Sbjct: 170 gtgcttggactgaagggagctcct 193
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ttggattgaagggagctcct 179
||||||||||||||||||||
Sbjct: 196 ttggattgaagggagctcct 215
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ttggattgaagggagctcct 179
||||||||||||||||||||
Sbjct: 198 ttggattgaagggagctcct 217
>39730_smo-MIR159:mirbase
Length = 279
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 cttggattgaagggagctcc 178
||||||||||||||||||||
Sbjct: 249 cttggattgaagggagctcc 268
>39424_pta-MIR319:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 159 cttggattgaagggagctcc 178
||||||||||||||||||||
Sbjct: 27 cttggattgaagggagctcc 8
>39419_pta-MIR159c:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 cttggattgaagggagctcc 178
||||||||||||||||||||
Sbjct: 49 cttggattgaagggagctcc 68
>39417_pta-MIR159a:mirbase
Length = 210
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 cttggattgaagggagctcc 178
||||||||||||||||||||
Sbjct: 184 cttggattgaagggagctcc 203
