miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42727_zma-MIR166k:mirbase
Length = 168
Score = 333 bits (168), Expect = 2e-92
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 gcatgctcgggttaggtcagggggattgttgtctggctcggggtctccggtcgagatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcatgctcgggttaggtcagggggattgttgtctggctcggggtctccggtcgagatcga 60
Query: 61 ttcataacatatacgtacgtgcttctagccttgccggcggagctagtcgttgtcgtcgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcataacatatacgtacgtgcttctagccttgccggcggagctagtcgttgtcgtcgac 120
Query: 121 cggagatttcggaccaggcttcaatccctttgaccatgcggcattagg 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggagatttcggaccaggcttcaatccctttgaccatgcggcattagg 168
>42514_sbi-MIR166g:mirbase
Length = 134
Score = 97.6 bits (49), Expect = 3e-21
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 109 gttgtcgtcgaccggagatttcggaccaggcttcaatccctttgaccatgcggcatt 165
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 75 gttgtcgttgaccggagatttcggaccaggcttcaatccctttaaccatgcggcatt 131
Score = 93.7 bits (47), Expect = 4e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 2 catgctcgggttaggtcagggggattgttgtctggctcggggtctccggtcgaga 56
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catgctcggattaggttagggggattgttgtctggctcggggtctccggtcgaga 56
>42730_zma-MIR166n:mirbase
Length = 96
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 111 tgtcgtcgaccggagatttcggaccaggcttcaatccctt 150
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 57 tgtcgtcgaccggagatctcggaccaggcttcaatccctt 96
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 22 gggattgttgtctggctcggggtctccggtcgaga 56
|||||||||||||||||||| ||||||||||||||
Sbjct: 1 gggattgttgtctggctcggtgtctccggtcgaga 35
>41947_osa-MIR166k:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatccctttgaccatgc 159
||||||||||||||||||||||| |||||||
Sbjct: 97 tcggaccaggcttcaatccctttaaccatgc 127
>41948_osa-MIR166l:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatccctttgacca 156
||||||||||||||||||||||| ||||
Sbjct: 87 tcggaccaggcttcaatccctttaacca 114
>42726_zma-MIR166j:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatcccttt 151
|||||||||||||||||||||||
Sbjct: 115 tcggaccaggcttcaatcccttt 137
>42512_sbi-MIR166e:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatcccttt 151
|||||||||||||||||||||||
Sbjct: 112 tcggaccaggcttcaatcccttt 134
>41949_osa-MIR166m:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatccctttgacca 156
||||||||||||||| ||||||| ||||
Sbjct: 147 tcggaccaggcttcattccctttaacca 174
>41837_bdi-MIR5168:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 129 tcggaccaggcttcaatccctttgacca 156
|||||||||||||| |||||||| ||||
Sbjct: 157 tcggaccaggcttcgatccctttaacca 184
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ggggattgttgtctggctcggggt 44
||||| ||||||||||||||||||
Sbjct: 29 ggggaatgttgtctggctcggggt 52
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 65 gatttcggaccaggcttcattccc 88
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ggggattgttgtctggctcg 40
||||||||||||||||||||
Sbjct: 10 ggggattgttgtctggctcg 29
>41531_sly-MIR166a:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 82 gatttcggaccaggcttcattccc 105
>41326_ptc-MIR166e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 73 gatttcggaccaggcttcattccc 96
>41323_ptc-MIR166b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 73 gatttcggaccaggcttcattccc 96
>41224_csi-MIR166c:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 96 gatttcggaccaggcttcattccc 119
>41168_aqc-MIR166b:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 64 gatttcggaccaggcttcattccc 87
>41094_tcc-MIR166a:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 74 gatttcggaccaggcttcattccc 97
>40349_rco-MIR166c:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 125 gatttcggaccaggcttcaatccc 148
||||||||||||||||||| ||||
Sbjct: 62 gatttcggaccaggcttcattccc 85
