miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42728_zma-MIR166l:mirbase
Length = 137
Score = 272 bits (137), Expect = 6e-74
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1 aaagaacgggaggagggtttctggaatggaggctggtccaagatccttaggtgttaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagaacgggaggagggtttctggaatggaggctggtccaagatccttaggtgttaaagc 60
Query: 61 attatattgccttgtttctggttttgtgtttgagatctcggaccaggcttcattcctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatattgccttgtttctggttttgtgtttgagatctcggaccaggcttcattcctcaa 120
Query: 121 acccacgctcccgacac 137
|||||||||||||||||
Sbjct: 121 acccacgctcccgacac 137
>42508_sbi-MIR166a:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 91 tgagatctcggaccaggcttcattcc 116
||||||||||||||||||||||||||
Sbjct: 81 tgagatctcggaccaggcttcattcc 106
>41943_osa-MIR166g:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcctca 119
||||||||||||||||||||||||||
Sbjct: 111 gatctcggaccaggcttcattcctca 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tctggaatggaggctggtccaagatc 45
|||||||||||||||| |||||||||
Sbjct: 10 tctggaatggaggctgatccaagatc 35
>41748_bdi-MIR166f:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcctca 119
||||||||||||||||||||||||||
Sbjct: 90 gatctcggaccaggcttcattcctca 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tctggaatggaggctggtccaagatcctt 48
|||||||||||||||| ||||||||||||
Sbjct: 25 tctggaatggaggctgatccaagatcctt 53
>41096_tcc-MIR166c:mirbase
Length = 141
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcctca 119
||||||||||||||||||||||||||
Sbjct: 97 gatctcggaccaggcttcattcctca 122
>40673_mtr-MIR166f:mirbase
Length = 179
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcctca 119
||||||||||||||||||||||||||
Sbjct: 150 gatctcggaccaggcttcattcctca 175
>42720_zma-MIR166d:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 79 agatctcggaccaggcttcattcc 102
>42718_zma-MIR166b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 91 agatctcggaccaggcttcattcc 114
>42717_zma-MIR166a:mirbase
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 184 agatctcggaccaggcttcattcc 207
>42515_sbi-MIR166h:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 157 agatctcggaccaggcttcattcc 180
>41938_osa-MIR166b:mirbase
Length = 206
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 163 agatctcggaccaggcttcattcc 186
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcc 116
||||||||||||||||||||||||
Sbjct: 187 agatctcggaccaggcttcattcc 210
>41583_vvi-MIR166a:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcct 117
||||||||||||||||||||||||
Sbjct: 96 gatctcggaccaggcttcattcct 119
>41336_ptc-MIR166o:mirbase
Length = 324
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcct 117
||||||||||||||||||||||||
Sbjct: 292 gatctcggaccaggcttcattcct 315
>41335_ptc-MIR166n:mirbase
Length = 331
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcct 117
||||||||||||||||||||||||
Sbjct: 299 gatctcggaccaggcttcattcct 322
>41169_aqc-MIR166c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcct 117
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattcct 108
>42721_zma-MIR166e:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>42719_zma-MIR166c:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcc 90
>42518_sbi-MIR166k:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcctc 118
|||||||||||||||||||||||
Sbjct: 81 tctcggaccaggcttcattcctc 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gaatggaggctggtccaagatcct 47
|||||||||||| |||||||||||
Sbjct: 1 gaatggaggctgatccaagatcct 24
>42511_sbi-MIR166d:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>41946_osa-MIR166j:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcctca 119
|||||||||| ||||||||||||||||
Sbjct: 110 agatctcggatcaggcttcattcctca 136
>41945_osa-MIR166i:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 agatctcggaccaggcttcattcctca 119
|||||||||| ||||||||||||||||
Sbjct: 110 agatctcggatcaggcttcattcctca 136
>41940_osa-MIR166d:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 87 gatctcggaccaggcttcattcc 109
>41937_osa-MIR166a:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 95 gatctcggaccaggcttcattcc 117
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 117 gatctcggaccaggcttcattcc 139
>41590_vvi-MIR166h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcc 87
>41329_ptc-MIR166h:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcc 90
>41328_ptc-MIR166g:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 70 gatctcggaccaggcttcattcc 92
>41223_csi-MIR166b:mirbase
Length = 192
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 147 gatctcggaccaggcttcattcc 169
>41213_crt-MIR166a:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 157 gatctcggaccaggcttcattcc 179
>41097_tcc-MIR166d:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 75 gatctcggaccaggcttcattcc 97
>41095_tcc-MIR166b:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 135 gatctcggaccaggcttcattcc 157
>40675_mtr-MIR166h:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>40670_mtr-MIR166c:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcctc 118
|||||||||||||||||||||||
Sbjct: 78 tctcggaccaggcttcattcctc 100
>40669_mtr-MIR166b:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atctcggaccaggcttcattcct 117
|||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcct 164
>40668_mtr-MIR166:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 78 gatctcggaccaggcttcattcc 100
>40350_rco-MIR166d:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 gatctcggaccaggcttcattcc 116
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>39377_pab-MIR166b:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atctcggaccaggcttcattcct 117
|||||||||||||||||||||||
Sbjct: 68 atctcggaccaggcttcattcct 90
>41338_ptc-MIR166q:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcct 117
||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcct 142
>41167_aqc-MIR166a:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 ctcggaccaggcttcattcctc 118
||||||||||||||||||||||
Sbjct: 85 ctcggaccaggcttcattcctc 106
>39822_aly-MIR166b:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 atctcggaccaggcttcattcc 116
||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128
>42730_zma-MIR166n:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 gagatctcggaccaggcttca 112
|||||||||||||||||||||
Sbjct: 69 gagatctcggaccaggcttca 89
>42729_zma-MIR166m:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcctc 137
>42725_zma-MIR166i:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>42516_sbi-MIR166i:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcc 84
>42513_sbi-MIR166f:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcctc 120
>41944_osa-MIR166h:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcctc 109
>41942_osa-MIR166f:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>41584_vvi-MIR166b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcctc 88
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94
>41170_aqc-MIR166d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcctc 125
>41025_pvu-MIR166a:mirbase
Length = 670
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 226 tctcggaccaggcttcattcc 246
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 80 tctcggaccaggcttcattcc 100
>40440_gma-MIR166b:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146
>40267_bna-MIR166d:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>40038_ath-MIR166g:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcc 103
>40035_ath-MIR166d:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>40034_ath-MIR166c:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121
>39827_aly-MIR166g:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 87 tctcggaccaggcttcattcc 107
>39824_aly-MIR166d:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>39823_aly-MIR166c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 93 tctcggaccaggcttcattcc 113
>39734_smo-MIR166b:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcc 117
>39733_smo-MIR166a:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tctcggaccaggcttcattcc 116
|||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126
>39376_pab-MIR166a:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcctc 118
|||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcctc 75
>42517_sbi-MIR166j:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 97 ctcggaccaggcttcattcc 116
||||||||||||||||||||
Sbjct: 84 ctcggaccaggcttcattcc 103
>41949_osa-MIR166m:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 97 ctcggaccaggcttcattcc 116
||||||||||||||||||||
Sbjct: 146 ctcggaccaggcttcattcc 165
