miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00640;MIR167_1;EU952646.1/178-293 4577:Zea mays
Length = 116
Score = 149 bits (75), Expect = 7e-36
Identities = 87/91 (95%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctggctactcaaacgccgccgggcctccaagtgctcgatcgg 60
|||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctggctgctcaaacgccgccggcctcccaagtgctcgatcgg 73
Query: 61 tggcgcttcaccagatcatgttgcagcttca 91
|||||||||||||||||||||||||||||||
Sbjct: 74 tggcgcttcaccagatcatgttgcagcttca 104
>RF00640;MIR167_1;EU549029.1/122-486 3702:Arabidopsis thaliana
(thale cress)
Length = 365
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;EU549031.1/122-508 3702:Arabidopsis thaliana
(thale cress)
Length = 387
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;EU549010.1/122-488 3702:Arabidopsis thaliana
(thale cress)
Length = 367
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AARH01012195.1/26948-26514 3694:Populus
trichocarpa
Length = 435
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AC212802.1/77650-78085 3694:Populus trichocarpa
Length = 436
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AASG02013372.1/3243-2901 3988:Ricinus communis
(castor bean)
Length = 343
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AASG02001065.1/6152-6064 3988:Ricinus communis
(castor bean)
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;BABK01002345.1/2496-2649 34305:Lotus japonicus
Length = 154
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;CAAP02000801.1/49293-49646 29760:Vitis vinifera
Length = 354
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;BT062276.1/99-327 4577:Zea mays
Length = 229
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;EU944277.1/110-337 4577:Zea mays
Length = 228
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;ABXC01006864.1/41201-41318 4558:Sorghum bicolor
(sorghum)
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AACV01003428.1/8526-8249 39947:Oryza sativa
Japonica Group
Length = 278
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
>RF00640;MIR167_1;AAAA02020690.1/41483-41278 39946:Oryza sativa
Indica Group
Length = 206
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcatgatctgg 22
||||||||||||||||||||||
Sbjct: 14 tgaagctgccagcatgatctgg 35
