miRNEST 2.0, an integrative microRNA resource :: BLAST
>46379_miR171:micropc
Length = 85
Score = 129 bits (65), Expect = 5e-31
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 18 cgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactct 77
||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 1 cgggatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactct 60
Query: 78 ttgactgagccgtgccaatatcacg 102
|||| ||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcacg 85
>46091_miR171:micropc
Length = 85
Score = 129 bits (65), Expect = 5e-31
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 18 cgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactct 77
||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct: 1 cgggatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactct 60
Query: 78 ttgactgagccgtgccaatatcacg 102
|||| ||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcacg 85
>45935_miR171:micropc
Length = 80
Score = 119 bits (60), Expect = 5e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactctttg 80
|||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||
Sbjct: 1 gatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactctttg 60
Query: 81 actgagccgtgccaatatca 100
| ||||||||||||||||||
Sbjct: 61 attgagccgtgccaatatca 80
>45560_miR171:micropc
Length = 80
Score = 119 bits (60), Expect = 5e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactctttg 80
|||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||
Sbjct: 1 gatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactctttg 60
Query: 81 actgagccgtgccaatatca 100
| ||||||||||||||||||
Sbjct: 61 attgagccgtgccaatatca 80
>44823_miR171:micropc
Length = 80
Score = 119 bits (60), Expect = 5e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactctttg 80
|||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||
Sbjct: 1 gatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactctttg 60
Query: 81 actgagccgtgccaatatca 100
| ||||||||||||||||||
Sbjct: 61 attgagccgtgccaatatca 80
>46838_miR171:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacg 86
>46750_miR171:micropc
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 cgggatattggtgcggttcaatcagaaagc 47
|||||||||||| ||||||||| |||||||
Sbjct: 1 cgggatattggtccggttcaataagaaagc 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 66 tgagccgtgccaatatcacg 85
>46619_miR171:micropc
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 59 tttgattgagccgtgccaatatcacg 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 4 gatattggtgcggttcaatc 23
>46536_miR171:micropc
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 68 gctccactctttgactgagccgtgccaatatcac 101
||||| || ||||| |||||||||||||||||||
Sbjct: 47 gctccgctttttgattgagccgtgccaatatcac 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
||||||||||||||||||| |||||
Sbjct: 1 gatattggtgcggttcaataagaaa 25
>46341_miR171:micropc
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 59 tttgattgagccgtgccaatatcacg 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 4 gatattggtgcggttcaatc 23
>45720_miR171:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacg 86
>45253_miR171:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacg 86
>44853_miR171:micropc
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 68 gctccactctttgactgagccgtgccaatatcac 101
||||| || ||||| |||||||||||||||||||
Sbjct: 47 gctccgctttttgattgagccgtgccaatatcac 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
||||||||||||||||||| |||||
Sbjct: 1 gatattggtgcggttcaataagaaa 25
>44805_miR171:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacg 86
>46797_miR171:micropc
Length = 78
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
||||||||||||||||||| |||||
Sbjct: 1 gatattggtgcggttcaataagaaa 25
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 68 gctccactctttgactgagccgtgccaatatc 99
||||| || ||||| |||||||||||||||||
Sbjct: 47 gctccgctttttgattgagccgtgccaatatc 78
>46484_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 19 gggatattggtgcggttcaatcagaaagc 47
||||||||||| ||||||||| |||||||
Sbjct: 1 gggatattggtccggttcaataagaaagc 29
>46329_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>46271_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>45801_miR171:micropc
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatcac 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 3 gatattggtgcggttcaatc 22
>45506_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>45494_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>45484_miR171:micropc
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcac 85
>45472_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>45471_miR171:micropc
Length = 79
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
||||||||||||||||||| |||||
Sbjct: 1 gatattggtgcggttcaataagaaa 25
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 68 gctccactctttgactgagccgtgccaatatca 100
||||| || ||||| ||||||||||||||||||
Sbjct: 47 gctccgctttttgattgagccgtgccaatatca 79
>45162_miR171:micropc
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatcac 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 3 gatattggtgcggttcaatc 22
>44954_miR171:micropc
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>44894_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 19 gggatattggtgcggttcaatcagaaagc 47
||||||||||| ||||||||| |||||||
Sbjct: 1 gggatattggtccggttcaataagaaagc 29
>46844_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatca 81
>46778_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 1 gatattggtgcggttcaatc 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 56 tttgattgagccgtgccaatatca 79
>46689_miR171:micropc
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 93 ttgattgagccgtgccaatatcac 116
>46548_miR171:micropc
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatcac 117
>46442_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatca 81
>46350_miR171:micropc
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 atattggtgcggttcaatcagaaa 45
|||||||||||||||||| |||||
Sbjct: 1 atattggtgcggttcaataagaaa 24
>46314_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 55 tttgattgagccgtgccaatatca 78
>46160_miR171:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 54 tttgattgagccgtgccaatatca 77
>45997_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatca 81
>45658_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatca 81
>45657_miR171:micropc
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>45600_miR171:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatc 40
||||||||||||||||||||
Sbjct: 1 gatattggtgcggttcaatc 20
>45559_miR171:micropc
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatcac 117
>45371_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>45360_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 56 tttgattgagccgtgccaatatca 79
>45270_miR171:micropc
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatca 84
>45103_miR171:micropc
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatca 84
>45068_miR171:micropc
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 93 ttgattgagccgtgccaatatcac 116
>44999_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>44950_miR171:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 54 tttgattgagccgtgccaatatca 77
>44817_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 58 tttgattgagccgtgccaatatca 81
