miRNEST 2.0, an integrative microRNA resource :: BLAST
>54462_sbi-miR171k:pmrd
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 18 cgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactct 77
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgggatattggcgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactct 60
Query: 78 ttgactgagccgtgccaatatcacgtc 104
|||| ||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcacgtc 87
>48897_osa-miR171c:pmrd
Length = 99
Score = 135 bits (68), Expect = 8e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 17 acgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactc 76
|||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||
Sbjct: 7 acgggatattggtgcggttcaatcagaaagcttgtgctccgaaggcgaggggctccactc 66
Query: 77 tttgactgagccgtgccaatatcacgtc 104
||||| ||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcacgtc 94
>55029_zma-miR171b:pmrd
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 18 cgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactct 77
||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 1 cgggatattggcgcggttcaatcagaaagcttgcgctccaggcccgaggggctccactct 60
Query: 78 ttgactgagccgtgccaatatcacg 102
|||| ||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcacg 85
>48896_osa-miR171b:pmrd
Length = 100
Score = 81.8 bits (41), Expect = 1e-16
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 17 acgggatattggtgcggttcaatcagaaagcttgcgctccaaagcccaggggctccactc 76
|||||||||||| ||||||||||||||||||||| ||||| | | ||| |||| ||||
Sbjct: 7 acgggatattggggcggttcaatcagaaagcttgtgctccggaagcgaggagctctactc 66
Query: 77 -tttgactgagccgtgccaatatcacgtc 104
||||| ||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatcacgtc 95
>48312_bdi-miR171c:pmrd
Length = 86
Score = 67.9 bits (34), Expect = 2e-12
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 23 tattggtgcggttcaatcagaaagcttgcgctccaaagcc--caggggctccactctttg 80
|||||||||||||||||||||||||| ||||||| | | ||||| ||| |||||||
Sbjct: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctctttg 65
Query: 81 actgagccgtgccaatatcac 101
| |||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcac 86
>54830_vvi-miR171c:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 tacgggatattggtgcggttcaatcagaaagc 47
|||||||||||||||||||||||| |||||||
Sbjct: 7 tacgggatattggtgcggttcaataagaaagc 38
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacgt 103
||||| |||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacgt 94
>54831_vvi-miR171d:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacgtcct 106
||||| ||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacgtcct 94
>54681_tae-miR171b:pmrd
Length = 80
Score = 52.0 bits (26), Expect = 9e-08
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 tattggtgcggttcaatcagaaagcttgcgctcca-aagcccaggggctccactctttga 81
||||||||||||||||||||| |||| |||| ||| || | ||||| ||| | ||| ||
Sbjct: 3 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 62
Query: 82 ctgagccgtgccaatatc 99
|||||||||||||||||
Sbjct: 63 ttgagccgtgccaatatc 80
>54679_tae-miR170a:pmrd
Length = 81
Score = 52.0 bits (26), Expect = 9e-08
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 23 tattggtgcggttcaatcagaaagcttgcgctcca-aagcccaggggctccactctttga 81
||||||||||||||||||||| |||| |||| ||| || | ||||| ||| | ||| ||
Sbjct: 4 tattggtgcggttcaatcagagagctggcgccccaggaggcaaggggttcctcccttcga 63
Query: 82 ctgagccgtgccaatatc 99
|||||||||||||||||
Sbjct: 64 ttgagccgtgccaatatc 81
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 acgggatattggtgcggttcaatcagaaag 46
||||||||||||| ||||||||||||||||
Sbjct: 1 acgggatattggtacggttcaatcagaaag 30
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacgt 103
||||| |||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacgt 87
>51684_ptc-miR171a:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 acgggatattggtgcggttcaatcagaaag 46
||||||||||||| ||||||||||||||||
Sbjct: 10 acgggatattggtacggttcaatcagaaag 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacgt 103
||||| |||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcacgt 96
>46979_ath-miR171c:pmrd
Length = 116
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 tacgggatattggtgcggttcaatcagaaa 45
|||| |||||||||||||||||||||||||
Sbjct: 24 tacgagatattggtgcggttcaatcagaaa 53
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcacg 110
>55037_zma-miR171j:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 65 ggggctccactctttgactgagccgtgccaatatcacgtcc 105
||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 76 ggggctctgctctctgattgagccgtgccaatatcacgtcc 116
>54453_sbi-miR171b:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 65 ggggctccactctttgactgagccgtgccaatatcacgtcc 105
||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 79 ggggctctgctctctgattgagccgtgccaatatcacgtcc 119
>48386_bol-miR171a:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
|||||||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatcagaaa 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
>48366_bna-miR171d:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
|||||||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatcagaaa 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
>54553_sly-miR171c:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaagc 47
||||||||||||||||||| |||||||
Sbjct: 20 gatattggtgcggttcaatgagaaagc 46
>54552_sly-miR171b:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaagc 47
||||||||||||||||||| |||||||
Sbjct: 5 gatattggtgcggttcaattagaaagc 31
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacgt 103
|||||||||||||||||||||
Sbjct: 66 tgagccgtgccaatatcacgt 86
>51685_ptc-miR171b:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcaga 43
|||||||||||||||||||||||
Sbjct: 14 gatattggtgcggttcaatcaga 36
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacgt 103
||||| |||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcacgt 95
>48567_gma-miR171a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 acgggatattggtgcggttcaatcagaaagc 47
||||||||||||| ||||||||| |||||||
Sbjct: 6 acgggatattggtccggttcaataagaaagc 36
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 72 tgagccgtgccaatatcacg 91
>48403_bra-miR171a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 gatattggtgcggttcaatcagaaa 45
|||||||||| ||||||||||||||
Sbjct: 4 gatattggtgtggttcaatcagaaa 28
>48367_bna-miR171e:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 tacgggatattggtgcggttcaatcagaaa 45
|||| |||||||||| ||||||||||||||
Sbjct: 4 tacgagatattggtgtggttcaatcagaaa 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcacg 102
||||| ||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacg 90
>54452_sbi-miR171a:pmrd
Length = 161
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatcac 101
||||| |||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144
>46881_aqc-miR171f:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacgt 103
|||||||||||||||||||||
Sbjct: 66 tgagccgtgccaatatcacgt 86
>55036_zma-miR171i:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>55033_zma-miR171f:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 ttgactgagccgtgccaatatcac 101
|||| |||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>51346_ppe-miR171:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>51345_ppe-miR170:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgactgagccgtgccaatatca 100
||||| ||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>48406_bra-miR171d:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 74 tgagccgtgccaatatcacg 93
>48405_bra-miR171c:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 68 tgagccgtgccaatatcacg 87
>48404_bra-miR171b:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 75 tgagccgtgccaatatcacg 94
>48365_bna-miR171c:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 68 tgagccgtgccaatatcacg 87
>48364_bna-miR171b:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 74 tgagccgtgccaatatcacg 93
>48363_bna-miR171a:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 75 tgagccgtgccaatatcacg 94
>46978_ath-miR171b:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgagccgtgccaatatcacg 102
||||||||||||||||||||
Sbjct: 79 tgagccgtgccaatatcacg 98
