miRNEST 2.0, an integrative microRNA resource :: BLAST
>55033_zma-miR171f:pmrd
Length = 155
Score = 79.8 bits (40), Expect = 4e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcacaaccttctctagccta 103
||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcacaaccttctctagccta 153
Score = 75.8 bits (38), Expect = 6e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 4 gttggctgagagagtgcgatgttggcacggttcaatcaaatcgccggccg 53
||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 7 gttggctgagagagtgcgatgttggcatggctcaatcaactcgccggccg 56
>54452_sbi-miR171a:pmrd
Length = 161
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 2 tggttggctgagagagtgcgatgttggcacggttcaatcaaatc 45
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 tggttggctgagagagtgcgatgttggcatggttcaatcaaatc 45
Score = 79.8 bits (40), Expect = 4e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcacaaccttctctagccta 103
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgattgagccgtgccaatatcacaaccttctctagccta 160
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 gagagtgcgatgttggcacggttcaatcaaa 43
|||||||||||||||||| ||||||||||||
Sbjct: 1 gagagtgcgatgttggcatggttcaatcaaa 31
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcacaa 89
|||||||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatcacaa 119
>48900_osa-miR171f:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 gagagtgcgatgttggcacggttcaatcaaa 43
|||||||||||||||||| ||||||||||||
Sbjct: 3 gagagtgcgatgttggcatggttcaatcaaa 33
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcacaa 89
|||||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcacaa 121
>55029_zma-miR171b:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>54831_vvi-miR171d:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>54830_vvi-miR171c:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>54462_sbi-miR171k:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 62 ttgattgagccgtgccaatatcac 85
>51691_ptc-miR171h:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcaca 88
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>51690_ptc-miR171g:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcaca 88
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>51685_ptc-miR171b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 70 ttgattgagccgtgccaatatcac 93
>51684_ptc-miR171a:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 71 ttgattgagccgtgccaatatcac 94
>48897_osa-miR171c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 68 ttgattgagccgtgccaatatcac 91
>48896_osa-miR171b:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>48403_bra-miR171a:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>48386_bol-miR171a:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>48367_bna-miR171e:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>48366_bna-miR171d:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>48312_bdi-miR171c:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 63 ttgattgagccgtgccaatatcac 86
>46979_ath-miR171c:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatcac 87
||||||||||||||||||||||||
Sbjct: 86 ttgattgagccgtgccaatatcac 109
>55037_zma-miR171j:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcac 87
|||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcac 112
>55024_zma-miR170m:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 gcgatgttggcacggttcaatcaaatcgccggccg 53
|||||||||||| || |||||||| ||||||||||
Sbjct: 1 gcgatgttggcatggctcaatcaactcgccggccg 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>54453_sbi-miR171b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcac 87
|||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcac 115
>51346_ppe-miR171:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatca 86
|||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatca 88
>51345_ppe-miR170:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatca 86
|||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatca 88
>46877_aqc-miR171b:pmrd
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatcac 87
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>54836_vvi-miR171i:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatca 86
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>54828_vvi-miR171a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatca 86
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>54579_smo-miR171a:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
>54551_sly-miR171a:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 86 ttgattgagccgtgccaatatc 107
>51692_ptc-miR171i:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 99 ttgattgagccgtgccaatatc 120
>48723_mtr-miR171g:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>48406_bra-miR171d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>48405_bra-miR171c:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>48404_bra-miR171b:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>48365_bna-miR171c:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>48364_bna-miR171b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>48363_bna-miR171a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>46978_ath-miR171b:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgtgccaatatcac 87
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>46880_aqc-miR171e:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 22 ttgattgagccgtgccaatatc 1
>46879_aqc-miR171d:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 83 ttgattgagccgtgccaatatc 104
>46876_aqc-miR171a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 ttgattgagccgtgccaatatc 85
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>55032_zma-miR171e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>55031_zma-miR171d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>54680_tae-miR170b:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>54580_smo-miR171b:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 ttgagccgtgccaatatcaca 88
|||||||||||||||||||||
Sbjct: 71 ttgagccgtgccaatatcaca 91
>54553_sly-miR171c:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 59 acttgttgattgagccgtgccaatatcac 87
|||| |||||||||||| |||||||||||
Sbjct: 72 actttttgattgagccgcgccaatatcac 100
>54552_sly-miR171b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 attgagccgtgccaatatcac 87
|||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcac 84
>54460_sbi-miR171i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54455_sbi-miR171d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 60 tgattgagccgtgccaatatc 80
>51689_ptc-miR171f:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>51688_ptc-miR171e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>48905_osa-miR171n:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48904_osa-miR171m:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48899_osa-miR171e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>48898_osa-miR171d:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>48894_osa-miR170b:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48893_osa-miR170a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48663_hvv-miR171:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48662_hvv-miR170:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgattgagccgtgccaatatc 85
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48567_gma-miR171a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 attgagccgtgccaatatcac 87
|||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcac 90
>46881_aqc-miR171f:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 attgagccgtgccaatatcac 87
|||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcac 84
