miRNEST 2.0, an integrative microRNA resource :: BLAST
>55051_zma-miR319c:pmrd
Length = 216
Score = 276 bits (139), Expect = 6e-75
Identities = 176/189 (93%), Gaps = 7/189 (3%)
Strand = Plus / Plus
Query: 11 ttctctggaagagagctctcttcagtccactctgaaatggctgtagggtttcattagctg 70
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11 ttctgtggaagagagctctcttcagtccactctaaaatggctgtagggtttcattagctg 70
Query: 71 ccgactcatccattcacctgccaagaaccatggac-------aggtctggtcttggtagc 123
||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 71 ccgactcatccattcacctgccaagaaccatgggcaagcggtaggtctggtcttggtagc 130
Query: 124 cgagtgggtggcgcgggagctaaaatcaagctctacgctgtttgtggttggactgaaggg 183
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 131 cgagtgggtggcgcgggagctaaaatcaaactctacgctgtttacggttggactgaaggg 190
Query: 184 tgctccctt 192
|||||||||
Sbjct: 191 tgctccctt 199
>54469_sbi-miR319b:pmrd
Length = 179
Score = 264 bits (133), Expect = 2e-71
Identities = 167/179 (93%), Gaps = 7/179 (3%)
Strand = Plus / Plus
Query: 21 gagagctctcttcagtccactctgaaatggctgtagggtttcattagctgccgactcatc 80
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 1 gagagctctcttcagtccactctaaaatggctgtagagtttcattagctgccgactcatc 60
Query: 81 cattcacctgccaagaaccatggaca-------ggtctggtcttggtagccgagtgggtg 133
||||||||| |||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 61 cattcacctaccaagaaccatggacaagcgataggtttggtcttggtagccgagtgggtg 120
Query: 134 gcgcgggagctaaaatcaagctctacgctgtttgtggttggactgaagggtgctccctt 192
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 gcgcgggagctaaaatcaagctctacgctgtttatggttggactgaagggtgctccctt 179
>48914_osa-miR319a:pmrd
Length = 191
Score = 153 bits (77), Expect = 6e-38
Identities = 154/178 (86%), Gaps = 5/178 (2%)
Strand = Plus / Plus
Query: 18 gaagagagctctcttcagtccactctgaaatggctgtagggtttcattagctgccgactc 77
|||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||
Sbjct: 8 gaagagagctctcttcagtccactctcagatggctgtagggttttattagctgccgaatc 67
Query: 78 atccattcacctgccaagaaccatggacaggtctg---gtcttggtagccgagtgggtgg 134
|||||||||||| ||||||| || |||| || |||||||||| || ||| ||
Sbjct: 68 atccattcacctaccaagaaagttg--caggagtgtatctcttggtagcggactggatga 125
Query: 135 cgcgggagctaaaatcaagctctacgctgtttgtggttggactgaagggtgctccctt 192
||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 126 cgcgggagctaaaatttagctctgcgccgtttgtggttggactgaagggtgctccctt 183
>46884_aqc-miR319:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 agagagctctcttcagtccactc 42
|||||||||||||||||||||||
Sbjct: 1 agagagctctcttcagtccactc 23
>54844_vvi-miR319c:pmrd
Length = 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 18 gaagagagctctcttcagtccactctgaaatggctgtagggtttcattagctgccgactc 77
|||||||||| |||||||||||||| |||| ||||| || |||||||||||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactc 67
Query: 78 at 79
||
Sbjct: 68 at 69
>55052_zma-miR319d:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccct 191
|||||||||||||||||||||
Sbjct: 174 ttggactgaagggtgctccct 194
>55050_zma-miR319b:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccct 191
|||||||||||||||||||||
Sbjct: 175 ttggactgaagggtgctccct 195
>54642_sof-miR319a:pmrd
Length = 539
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccct 191
|||||||||||||||||||||
Sbjct: 1 ttggactgaagggtgctccct 21
>54468_sbi-miR319:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccct 191
|||||||||||||||||||||
Sbjct: 191 ttggactgaagggtgctccct 211
>51707_ptc-miR319a:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 2e-04
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactctgaaatggctgtagggtttcattagctgccgactca 78
||||||||| |||||||||||||| ||| ||||| ||| ||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactca 68
Query: 79 t 79
|
Sbjct: 69 t 69
>48915_osa-miR319b:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccct 191
|||||||||||||||||||||
Sbjct: 168 ttggactgaagggtgctccct 188
>55053_zma-miR319e:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccc 190
||||||||||||||||||||
Sbjct: 154 ttggactgaagggtgctccc 173
>54846_vvi-miR319f:pmrd
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 42 attagctgccgactcattcattca 65
>51712_ptc-miR319f:pmrd
Length = 202
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 56 attagctgccgactcattcattca 79
>51710_ptc-miR319d:pmrd
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 166 tgtggttggactgaagggtgctcccttt 193
|||| ||||||||||||| |||||||||
Sbjct: 160 tgtgcttggactgaagggagctcccttt 187
>51709_ptc-miR319c:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactc 42
||||||||| ||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactc 32
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 166 tgtggttggactgaagggtgctcccttt 193
|||| ||||||||||||| |||||||||
Sbjct: 163 tgtgcttggactgaagggagctcccttt 190
>51351_ppl-miR319:pmrd
Length = 204
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 55 attagctgccgactcattcattca 78
>48573_gma-miR319b:pmrd
Length = 208
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccctttt 194
||||||||||||| ||||||||||
Sbjct: 170 ttggactgaagggagctccctttt 193
>48572_gma-miR319a:pmrd
Length = 207
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactc 42
||||||||| ||||||||||||||
Sbjct: 19 aagagagctttcttcagtccactc 42
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 ttggactgaagggtgctccctttt 194
||||||||||||| ||||||||||
Sbjct: 169 ttggactgaagggagctccctttt 192
