miRNEST 2.0, an integrative microRNA resource :: BLAST
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 117 bits (59), Expect = 2e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaataaaactgatatcagttcagtaggc 76
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgtgtgaaatagaactgatatcagttcagtaggc 8
Query: 77 ccaagag 83
||||||
Sbjct: 7 acaagag 1
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 117 bits (59), Expect = 2e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaataaaactgatatcagttcagtaggc 76
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgtgtgaaatagaactgatatcagttcagtaggc 8
Query: 77 ccaagag 83
||||||
Sbjct: 7 acaagag 1
>33024_rno-mir-3074:mirbase
Length = 117
Score = 113 bits (57), Expect = 2e-26
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 ttgctcaagggcccgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactg 59
|||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 6 ttgctcaagggctcgactcctgttcctgctgaactgagccagtgtgtgaaatgagaactg 65
Query: 60 atatcagttcagtaggc 76
||||||| |||||||||
Sbjct: 66 atatcagctcagtaggc 82
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 1e-21
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 gggcccgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagt 67
|||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 gggctcgactcctgttcctgctgaactgagccagtgtgtgaaatgagaactgatatcagc 60
Query: 68 tcagtaggc 76
|||||||||
Sbjct: 61 tcagtaggc 69
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 1e-21
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 gggcccgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagt 67
|||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 gggctcgactcctgttcctgctgaactgagccagtgtgtgaaatgagaactgatatcagc 60
Query: 68 tcagtaggc 76
|||||||||
Sbjct: 61 tcagtaggc 69
>26413_tgu-mir-24:mirbase
Length = 132
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 14 cgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagt 72
|||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||
Sbjct: 128 cgactcctgttcctgctgaactgagccagtgtgtaaaatcagaactgatatcagctcagt 69
Query: 73 aggcccaagaggacaggtccatc 95
|||| | |||||| ||||||||
Sbjct: 68 aggcaccggaggacgggtccatc 46
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 89.7 bits (45), Expect = 3e-19
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
|||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtgaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 89.7 bits (45), Expect = 3e-19
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
|||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtgaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 cgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagt 72
|||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||
Sbjct: 4 cgactcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagt 63
Query: 73 aggc 76
||||
Sbjct: 64 aggc 67
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 87.7 bits (44), Expect = 1e-18
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 cgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagt 72
|||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||
Sbjct: 4 cgactcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagt 63
Query: 73 aggc 76
||||
Sbjct: 64 aggc 67
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 14 cgactcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagt 72
|||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||
Sbjct: 79 cgactcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagt 20
Query: 73 aggc 76
||||
Sbjct: 19 aggc 16
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 8
Query: 76 c 76
|
Sbjct: 7 c 7
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 81.8 bits (41), Expect = 8e-17
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgtgtaaaatgagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>25908_gga-mir-24:mirbase
Length = 68
Score = 73.8 bits (37), Expect = 2e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||| ||| |||| | |||||||||||| ||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtatgtaaaatcagaactgatatcagctcagtagg 9
Query: 76 c 76
|
Sbjct: 8 c 8
>31442_oan-mir-24:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 16 actcctgttcctgctgaactgagccagtgtgtgaaataaaactgatatcagttcagtagg 75
||||||||||||||||||||||||||||| || || | |||||||||||| ||||||||
Sbjct: 77 actcctgttcctgctgaactgagccagtgggtcaacgagaactgatatcagctcagtagg 18
Query: 76 c 76
|
Sbjct: 17 c 17
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtaggc 76
||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||
Sbjct: 62 cctgttcctgctgaactgagccagtgtgtacaatgagaactgatatcagctcagtaggc 4
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||||||
Sbjct: 106 gactcctgttcctgctgaactgagccagtgt 76
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 60.0 bits (30), Expect = 3e-10
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 24 tcctgctgaactgagccagtgtgtgaaat-aaaactgatatcagttcagtaggc 76
|||||||||||||||||||||||| |||| | ||||| |||||| |||||||||
Sbjct: 57 tcctgctgaactgagccagtgtgtaaaatcagaactgttatcagctcagtaggc 4
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
||||||||||||||||||||||||||||||
Sbjct: 87 gactcctgttcctgctgaactgagccagtg 58
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtg 36
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtg 36
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
||||||||||||||||||||||||||||||
Sbjct: 87 gactcctgttcctgctgaactgagccagtg 58
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
||||||||||||||||||||||||||||||
Sbjct: 70 gactcctgttcctgctgaactgagccagtg 41
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagt 43
|||||||||||||||||||||||||||||
Sbjct: 72 gactcctgttcctgctgaactgagccagt 44
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 18 tcctgttcctgctgaactgagccagtgtg 46
|||||||||||||||||||||||||||||
Sbjct: 73 tcctgttcctgctgaactgagccagtgtg 45
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 18 tcctgttcctgctgaactgagccagtgtg 46
|||||||||||||||||||||||||||||
Sbjct: 73 tcctgttcctgctgaactgagccagtgtg 45
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 16 actcctgttcctgctgaactgagccagtg 44
|||||||||||||||||||||||||||||
Sbjct: 74 actcctgttcctgctgaactgagccagtg 46
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgtg 46
||||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgtg 45
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 actcctgttcctgctgaactgagccagt 43
||||||||||||||||||||||||||||
Sbjct: 79 actcctgttcctgctgaactgagccagt 52
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 actcctgttcctgctgaactgagccagt 43
||||||||||||||||||||||||||||
Sbjct: 79 actcctgttcctgctgaactgagccagt 52
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 17 ctcctgttcctgctgaactgagccagt 43
|||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagt 42
>28270_ggo-mir-24:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagtgt 45
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
>25444_pma-mir-24:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 15 gactcctgttcctgctgaactgagccagtg 44
|||| |||||||||||||||||||||||||
Sbjct: 84 gacttctgttcctgctgaactgagccagtg 55
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagt 43
|||||||||||||||||||||||||
Sbjct: 62 cctgttcctgctgaactgagccagt 38
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagt 43
|||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagt 48
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccagt 43
|||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccagt 49
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccag 42
||||||||||||||||||||||||
Sbjct: 78 cctgttcctgctgaactgagccag 55
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccag 42
||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccag 50
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 19 cctgttcctgctgaactgagccag 42
||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccag 50
