miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42793_zma-MIR395c:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 tcttggttggttctcccttggagttccctgcaaacacttcaccagctaggccatagtgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttggttggttctcccttggagttccctgcaaacacttcaccagctaggccatagtgcc 60
Query: 61 ggcccttgcacaatgttgtatctgatcacctagctagtgtgaagtgtttggaggaactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcccttgcacaatgttgtatctgatcacctagctagtgtgaagtgtttggaggaactct 120
Query: 121 aggtgttatccagcaatg 138
||||||||||||||||||
Sbjct: 121 aggtgttatccagcaatg 138
>42010_osa-MIR395j:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 92 agctagtgtgaagtgtttggaggaactctaggtg 125
||||| |||||||||||||| |||||||||||||
Sbjct: 75 agctactgtgaagtgtttgggggaactctaggtg 108
>42802_zma-MIR395l:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 agttccctgcaaacacttcaccagctaggccat 54
|||||| | ||||||||||||||||||||||||
Sbjct: 1 agttccttccaaacacttcaccagctaggccat 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 gtgaagtgtttggaggaactct 120
||||||||||||||||||||||
Sbjct: 60 gtgaagtgtttggaggaactct 81
>42578_sbi-MIR395i:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 gttccctgcaaacacttcaccagctaggccata 55
|||||||||||||||||||| |||||| |||||
Sbjct: 1 gttccctgcaaacacttcacaagctagaccata 33
>42003_osa-MIR395c:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 98 tgtgaagtgtttggaggaactctaggtgt 126
||||||||||||||||||||||| |||||
Sbjct: 58 tgtgaagtgtttggaggaactctcggtgt 86
>42803_zma-MIR395m:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 97 gtgtgaagtgtttggaggaactct 120
||||||||||||||||||||||||
Sbjct: 59 gtgtgaagtgtttggaggaactct 82
>41787_bdi-MIR395k:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgtta 128
|||| |||||||||||||| |||||||| |||||||
Sbjct: 50 gctactgtgaagtgtttgggggaactcttggtgtta 85
>41779_bdi-MIR395c:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgtta 128
|||| |||||||||||||| |||||||| |||||||
Sbjct: 68 gctactgtgaagtgtttgggggaactcttggtgtta 103
>42008_osa-MIR395h:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 gtgaagtgtttggaggaactctaggtg 125
||||||||||||| |||||||||||||
Sbjct: 82 gtgaagtgtttgggggaactctaggtg 108
>42580_sbi-MIR395k:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tgtgaagtgtttggaggaactc 119
||||||||||||||||||||||
Sbjct: 59 tgtgaagtgtttggaggaactc 80
>42025_osa-MIR395y:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 agctagtgtgaagtgtttggaggaactctaggtg 125
||||| |||||||||||||| |||||||| ||||
Sbjct: 74 agctattgtgaagtgtttgggggaactctcggtg 107
>41790_bdi-MIR395n:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgt 126
|||| |||||||||||||| |||||||| |||||
Sbjct: 52 gctattgtgaagtgtttgggggaactcttggtgt 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gagttccctgcaaacacttcacca 44
||||||||||||| ||||||||||
Sbjct: 13 gagttccctgcaagcacttcacca 36
>41789_bdi-MIR395m:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgt 126
|||| |||||||||||||| |||||||| |||||
Sbjct: 57 gctattgtgaagtgtttgggggaactcttggtgt 90
>41788_bdi-MIR395l:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgt 126
|||| |||||||||||||| |||||||| |||||
Sbjct: 55 gctactgtgaagtgtttgggggaactcttggtgt 88
>41778_bdi-MIR395b:mirbase
Length = 238
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactctaggtgt 126
|||| |||||||||||||| |||||||| |||||
Sbjct: 180 gctactgtgaagtgtttgggggaactcttggtgt 213
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactct 120
|||| |||||||||||||| ||||||||
Sbjct: 25 gctattgtgaagtgtttgggggaactct 52
>41425_ptc-MIR395a:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 100 tgaagtgtttggaggaactctaggtg 125
||||| ||||||||||||||||||||
Sbjct: 199 tgaagggtttggaggaactctaggtg 224
>42805_zma-MIR395o:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 98 tgtgaagtgtttggaggaactctaggtgt 126
|||||||||||||| |||||||| |||||
Sbjct: 44 tgtgaagtgtttgggggaactcttggtgt 72
>41782_bdi-MIR395f:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 98 tgtgaagtgtttggaggaactctaggtgt 126
|||||||||||||| |||||||| |||||
Sbjct: 60 tgtgaagtgtttgggggaactctcggtgt 88
>40375_rco-MIR395b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 tgaagtgtttggaggaactctaggt 124
|||||||||||| ||||||||||||
Sbjct: 73 tgaagtgtttgggggaactctaggt 97
>42791_zma-MIR395a:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 99 gtgaagtgtttggaggaactctaggtgt 126
||||||||||||| |||||||| |||||
Sbjct: 110 gtgaagtgtttgggggaactctgggtgt 137
>42573_sbi-MIR395d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 98 tgtgaagtgtttggaggaactctaggtg 125
|||||||||||||| |||||||| ||||
Sbjct: 63 tgtgaagtgtttgggggaactcttggtg 90
>42015_osa-MIR395o:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tgaagtgtttggaggaactc 119
||||||||||||||||||||
Sbjct: 50 tgaagtgtttggaggaactc 69
>42005_osa-MIR395e:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 97 gtgtgaagtgtttggaggaactct 120
||||||||||||||| ||||||||
Sbjct: 56 gtgtgaagtgtttgggggaactct 79
>41786_bdi-MIR395j:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactct 120
|||| |||||||||||||| ||||||||
Sbjct: 51 gctactgtgaagtgtttgggggaactct 78
>41785_bdi-MIR395i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactct 120
|||| |||||||||||||| ||||||||
Sbjct: 52 gctattgtgaagtgtttgggggaactct 79
>41784_bdi-MIR395h:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 93 gctagtgtgaagtgtttggaggaactct 120
|||| |||||||||||||| ||||||||
Sbjct: 45 gctactgtgaagtgtttgggggaactct 72
>39876_aly-MIR395i:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tgaagtgtttggaggaactc 119
||||||||||||||||||||
Sbjct: 64 tgaagtgtttggaggaactc 83
