miRNEST 2.0, an integrative microRNA resource :: BLAST
>25860_xtr-mir-429:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 4 tgcctgttgaccaatgtcttaccagacaaggttagatctagttactctcgtctaatactg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctgttgaccaatgtcttaccagacaaggttagatctagttactctcgtctaatactg 60
Query: 64 tctggtaatgccgttggtcacattggc 90
|||||||||||||||||||||||||||
Sbjct: 61 tctggtaatgccgttggtcacattggc 87
>31552_oan-mir-429:mirbase
Length = 112
Score = 71.9 bits (36), Expect = 8e-14
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 18 tgtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||
Sbjct: 26 tgtcttaccagacaaagttagatctgactattttcgtctaatactgtctggtaatgccgt 85
>34652_fru-mir-429:mirbase
Length = 76
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||| |||||||| || ||| | | |||||||||||||||||||||||||
Sbjct: 14 gtcttaccagacatggttagatgtaattattgttgtctaatactgtctggtaatgccgt 72
>34800_tni-mir-429:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||| |||||||| || ||| | | |||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacatggttagatgtaattattgttgtctaatactgtctggtaatgccgt 74
>27450_mdo-mir-429:mirbase
Length = 72
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 18 tgtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||||| ||||||||| | || | ||||||||||||||||||||||| |
Sbjct: 7 tgtcttaccagacaaagttagatctcgctatttctgtctaatactgtctggtaatgccat 66
Query: 78 tggtca 83
||||||
Sbjct: 67 tggtca 72
>26026_gga-mir-429:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 18 tgtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||| ||| ||||||||||| || | |||||||||||||||||||||||||
Sbjct: 14 tgtcttaccaggcaaagttagatctagctatttctgtctaatactgtctggtaatgccgt 73
>26843_cfa-mir-429:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgtt 78
||||||||||||| |||||||||| | | || ||||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacacggttagatctgggttctggtgtctaatactgtctggtaatgccgtt 75
>34094_ssc-mir-429:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 2e-11
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 18 tgtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||| || |||||||||| ||| ||| |||||||||||||||||||||||||
Sbjct: 13 tgtcttaccaggcacggttagatctggttcttct-gtctaatactgtctggtaatgccgt 71
>33372_bta-mir-429:mirbase
Length = 84
Score = 61.9 bits (31), Expect = 7e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||| |||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacacggttagatctggtccttct-gtctaatactgtctggtaatgccgt 73
>34400_dre-mir-429:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 7e-11
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||| |||||||| || | ||| |||||||||||||||||||||||||
Sbjct: 14 gtcttaccagacatggttagatgtaataacttgtgtctaatactgtctggtaatgccgt 72
>25673_xla-mir-429:mirbase
Length = 68
Score = 60.0 bits (30), Expect = 3e-10
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 17 atgtcttaccagacaaggttagatctagttac-tctcgtctaatactgtctggtaatgcc 75
||||||||||||||| |||||||||| | | | ||| |||||||||||||||||||||||
Sbjct: 4 atgtcttaccagacatggttagatctggatgcatct-gtctaatactgtctggtaatgcc 62
Query: 76 gt 77
||
Sbjct: 63 gt 64
>32069_mmu-mir-429:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 17 atgtcttaccagacaaggttagatctagttac-tctcgtctaatactgtctggtaatgcc 75
||||||||||||||| |||||||||| | | | ||| |||||||||||||||||||||||
Sbjct: 12 atgtcttaccagacatggttagatctggatgcatct-gtctaatactgtctggtaatgcc 70
Query: 76 gt 77
||
Sbjct: 71 gt 72
>27176_eca-mir-429:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 77
||||||||||||| |||||||||| | || |||||||||||||||||||||||||
Sbjct: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgt 63
>32910_rno-mir-429:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 7e-08
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 17 atgtcttaccagacaaggttagatctagttac-tctcgtctaatactgtctggtaatgcc 75
||||||||||||||| |||||||||| | | ||| |||||||||||||||||||||||
Sbjct: 14 atgtcttaccagacatggttagatctggatgtatct-gtctaatactgtctggtaatgcc 72
Query: 76 gt 77
||
Sbjct: 73 gt 74
>34401_dre-mir-429b:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 18 tgtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgcc 75
||||||||||| |||| |||||| | | |||| | ||||||||||| |||||||||||
Sbjct: 30 tgtcttaccaggcaagtttagatgttgatactgt-gtctaatactgcctggtaatgcc 86
>27902_mml-mir-429:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 47/53 (88%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 19 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaa 71
||||||||||||| ||||||| || | | |||| |||||||||||||||||||
Sbjct: 16 gtcttaccagacacggttagacctggct-ctct-gtctaatactgtctggtaa 66
>34889_sko-mir-200:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tctaatactgtctggtaatg 73
||||||||||||||||||||
Sbjct: 59 tctaatactgtctggtaatg 78
