miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25858_xtr-mir-427-3:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 8 agcacccaaaacggggctctctcttgtgcatgaattatggtgagaaagtgctttctgttt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcacccaaaacggggctctctcttgtgcatgaattatggtgagaaagtgctttctgttt 60
Query: 68 tgggcgttgt 77
||||||||||
Sbjct: 61 tgggcgttgt 70
>25856_xtr-mir-427-1:mirbase
Length = 70
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 8 agcacccaaaacggggctctctcttgtgcatgaattatggtgagaaagtgctttctgttt 67
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agcacccaaaacggggctctctcttgtgtatgaattatggtgagaaagtgctttctgttt 60
Query: 68 tgggcgttgt 77
||||||||||
Sbjct: 61 tgggcgttgt 70
>25857_xtr-mir-427-2:mirbase
Length = 70
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 8 agcacccaaaacggggctctctcttgtgcatgaattatggtgagaaagtgctttctgttt 67
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agcacccaaaacggggctctctcttgtgtatgaattatggtgagaaagtgctttctgttt 60
Query: 68 tgggcgttgt 77
||||||||||
Sbjct: 61 tgggcgttgt 70
>25671_xla-mir-427:mirbase
Length = 68
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 8 agcacccaaaacggggctctctcttgtgcatgaattatggtgagaaagtgctttctgttt 67
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 1 agcacccaaaacggggctctctcttgtgactgaattatgatgagaaagtgctttctgttt 60
Query: 68 tgggcgtt 75
||||||||
Sbjct: 61 tgggcgtt 68
