miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>25683_xtr-let-7i:mirbase
          Length = 85

 Score =  168 bits (85), Expect = 7e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 60

                                    
Query: 87  actgcgcaagctactgccttgctag 111
           |||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgctag 85




>26387_tgu-let-7i:mirbase
          Length = 92

 Score =  167 bits (84), Expect = 3e-42
 Identities = 87/88 (98%)
 Strand = Plus / Plus

                                                                       
Query: 26  cctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagat 85
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5   cctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagat 64

                                       
Query: 86  aactgcgcaagctactgccttgctagtg 113
           ||||||||||||||||||||||||||||
Sbjct: 65  aactgcgcaagctactgccttgctagtg 92




>27639_mml-let-7i:mirbase
          Length = 85

 Score =  161 bits (81), Expect = 2e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                    
Query: 87  actgcgcaagctactgccttgctag 111
           |||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgctag 85




>31762_mmu-let-7i:mirbase
          Length = 85

 Score =  161 bits (81), Expect = 2e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                    
Query: 87  actgcgcaagctactgccttgctag 111
           |||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgctag 85




>32647_rno-let-7i:mirbase
          Length = 85

 Score =  161 bits (81), Expect = 2e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                    
Query: 87  actgcgcaagctactgccttgctag 111
           |||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgctag 85




>33904_ssc-let-7i:mirbase
          Length = 85

 Score =  161 bits (81), Expect = 2e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                    
Query: 87  actgcgcaagctactgccttgctag 111
           |||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgctag 85




>25876_gga-let-7i:mirbase
          Length = 84

 Score =  159 bits (80), Expect = 6e-40
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>27326_mdo-let-7i:mirbase
          Length = 84

 Score =  159 bits (80), Expect = 6e-40
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>28349_hsa-let-7i:mirbase
          Length = 84

 Score =  159 bits (80), Expect = 6e-40
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>30741_ppy-let-7i:mirbase
          Length = 84

 Score =  159 bits (80), Expect = 6e-40
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>33118_bta-let-7i:mirbase
          Length = 84

 Score =  159 bits (80), Expect = 6e-40
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>30136_ptr-let-7i:mirbase
          Length = 83

 Score =  157 bits (79), Expect = 3e-39
 Identities = 82/83 (98%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60

                                  
Query: 87  actgcgcaagctactgccttgct 109
           |||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgct 83




>34533_fru-let-7i:mirbase
          Length = 84

 Score =  143 bits (72), Expect = 4e-35
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| 
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>34681_tni-let-7i:mirbase
          Length = 84

 Score =  143 bits (72), Expect = 4e-35
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| 
Sbjct: 1   ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60

                                   
Query: 87  actgcgcaagctactgccttgcta 110
           ||||||||||||||||||||||||
Sbjct: 61  actgcgcaagctactgccttgcta 84




>34182_dre-let-7i:mirbase
          Length = 95

 Score =  115 bits (58), Expect = 9e-27
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 86
           |||||||||||||||||||||||||||||| ||| ||||||| |||||| | ||||||| 
Sbjct: 6   ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65

                                         
Query: 87  actgcgcaagctactgccttgctagtgctg 116
           ||||||||||||||| |||||| |||||||
Sbjct: 66  actgcgcaagctactcccttgccagtgctg 95




>25677_xtr-let-7b:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 27 ctggctgaggtagtagtttgtg 48
          ||||||||||||||||||||||
Sbjct: 1  ctggctgaggtagtagtttgtg 22