miRNEST 2.0, an integrative microRNA resource :: BLAST
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 6 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagagagggc 101
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagagggc 96
>25910_gga-mir-27b:mirbase
Length = 97
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggct 72
Query: 78 aagttctgcacctgaagaga 97
||||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagaga 92
>27674_mml-mir-27b:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 6 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 65
|||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagaga 97
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 6 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 65
|||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagaga 97
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 6 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 65
|||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagaga 97
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>32681_rno-mir-27b:mirbase
Length = 97
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 6 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 65
|||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 66 ttcacagtggctaagttctgcacctgaagaga 97
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>26416_tgu-mir-27:mirbase
Length = 91
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggct 72
Query: 78 aagttctgcacctgaagag 96
|||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagag 91
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 141 bits (71), Expect = 1e-34
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 11 tctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcac 70
|||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 5 tctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcac 64
Query: 71 agtggctaagttctgcacctgaagaga 97
|||||||||||||||||||||||||||
Sbjct: 65 agtggctaagttctgcacctgaagaga 91
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 16 caaggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtgg 75
|||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 11 caaggtgcagagcttagccgattggtgaacagtcactgatttcctctttgttcacagtgg 70
Query: 76 ctaagttctgcacctgaagaga 97
||||||||||||||||||||||
Sbjct: 71 ctaagttctgcacctgaagaga 92
>34566_fru-mir-27b:mirbase
Length = 74
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagtt 82
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 83 ctgcacctg 91
|||||||||
Sbjct: 66 ctgcacctg 74
>34713_tni-mir-27b:mirbase
Length = 74
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagtt 82
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 83 ctgcacctg 91
|||||||||
Sbjct: 66 ctgcacctg 74
>33156_bta-mir-27b:mirbase
Length = 97
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 72
Query: 78 aagttctgcacctgaagaga 97
||||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagaga 92
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 121 bits (61), Expect = 1e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
Query: 78 aagttctgcacct 90
|||||||||||||
Sbjct: 61 aagttctgcacct 73
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 121 bits (61), Expect = 1e-28
Identities = 73/77 (94%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 4 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 63
Query: 78 aagttctgcacctgaag 94
|||||||||||||||||
Sbjct: 64 aagttctgcacctgaag 80
>26967_eca-mir-27b:mirbase
Length = 73
Score = 113 bits (57), Expect = 3e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 1 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 60
Query: 78 aagttctgcacct 90
|||||||||||||
Sbjct: 61 aagttctgcacct 73
>34238_dre-mir-27b:mirbase
Length = 91
Score = 111 bits (56), Expect = 1e-25
Identities = 76/82 (92%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 18 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 77
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 12 aggtgcagagcttagctgattggtgaacagtgattga---actctttgttcacagtggct 68
Query: 78 aagttctgcacctgaagagagg 99
|||||||||| |||| ||||||
Sbjct: 69 aagttctgcatctgaggagagg 90
>31445_oan-mir-27b:mirbase
Length = 117
Score = 97.6 bits (49), Expect = 2e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 22 gcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagt 81
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87
Query: 82 tctgc 86
|||||
Sbjct: 88 tctgc 92
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 24 agagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagttc 83
||||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
Query: 84 tgc 86
|||
Sbjct: 61 tgc 63
>25450_pma-mir-27b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttctgca 87
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>34240_dre-mir-27d:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 62 tttgttcacagtggctaagttctgcacc 89
||||||||||||||||||||||| ||||
Sbjct: 53 tttgttcacagtggctaagttcttcacc 80
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 ttgttcacagtggctaagttc 83
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgttcacagtggctaagttc 83
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
