miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48305_bdi-miR156:pmrd
Length = 147
Score = 73.8 bits (37), Expect = 1e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcacagcttgagtcggaggcc 595
|||||||||| ||||||||||||||||||||||||| ||||||| ||||
Sbjct: 89 ccatggctgagttgacagaagagagagagcacagctggagtcggcggcc 137
>48633_gra-miR157d:pmrd
Length = 89
Score = 65.9 bits (33), Expect = 3e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 534 gattcctggagctccatggctgatttgacagaagagagagagcac 578
|||| ||||||| |||||| |||||||||||||||||||||||||
Sbjct: 45 gatttctggagccccatggttgatttgacagaagagagagagcac 89
>54928_zma-miR157m:pmrd
Length = 189
Score = 56.0 bits (28), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcac 578
|||||||||| |||||||||||||||||||||
Sbjct: 158 ccatggctgagttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 56.0 bits (28), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcac 578
|||||||||| |||||||||||||||||||||
Sbjct: 158 ccatggctgagttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 56.0 bits (28), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcac 578
|||||||||| |||||||||||||||||||||
Sbjct: 158 ccatggctgagttgacagaagagagagagcac 189
>54627_sof-miR156u:pmrd
Length = 82
Score = 56.0 bits (28), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcac 578
|||||||||| |||||||||||||||||||||
Sbjct: 51 ccatggctgagttgacagaagagagagagcac 82
>48653_hvv-miR156b:pmrd
Length = 86
Score = 56.0 bits (28), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 547 ccatggctgatttgacagaagagagagagcac 578
|||||||||| |||||||||||||||||||||
Sbjct: 55 ccatggctgagttgacagaagagagagagcac 86
>54621_sof-miR156c:pmrd
Length = 68
Score = 54.0 bits (27), Expect = 1e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagcttgagtcggagg 593
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tgacagaagagagagagcacagctagagtccgagg 35
>46921_ath-miR156q:pmrd
Length = 59
Score = 54.0 bits (27), Expect = 1e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagcttgagtcg 589
|||||||||||||||||||||| ||||||||
Sbjct: 1 tgacagaagagagagagcacagtttgagtcg 31
>48655_hvv-miR156d:pmrd
Length = 203
Score = 52.0 bits (26), Expect = 5e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagcttgagtc 588
|||||||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacagctagagtc 30
>54624_sof-miR156f:pmrd
Length = 46
Score = 48.1 bits (24), Expect = 8e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagcttgagtcgg 590
||||||||||||||||||||| || |||||||
Sbjct: 1 tgacagaagagagagagcacaactggagtcgg 32
>54531_sin-miR157:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 8e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcacagc 581
||||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacagc 24
>48786_nbe-miR157a:pmrd
Length = 169
Score = 48.1 bits (24), Expect = 8e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 555 gatttgacagaagagagagagcac 578
||||||||||||||||||||||||
Sbjct: 146 gatttgacagaagagagagagcac 169
>48785_nbe-miR156b:pmrd
Length = 169
Score = 48.1 bits (24), Expect = 8e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 555 gatttgacagaagagagagagcac 578
||||||||||||||||||||||||
Sbjct: 146 gatttgacagaagagagagagcac 169
>48533_gma-miR156f:pmrd
Length = 267
Score = 48.1 bits (24), Expect = 8e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagct 582
||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacagct 24
>54571_smo-miR156c:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 3e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 553 ctgatttgacagaagagagagagcaca 579
|||||||||||||||| ||||||||||
Sbjct: 6 ctgatttgacagaagaaagagagcaca 32
>54530_sin-miR156:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacagc 581
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacagc 23
>48684_lsa-miR157:pmrd
Length = 357
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcacag 580
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacag 23
>54372_pts-miR157:pmrd
Length = 356
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 557 tttgacagaagagagagagcac 578
||||||||||||||||||||||
Sbjct: 335 tttgacagaagagagagagcac 356
>54370_pts-miR156b:pmrd
Length = 356
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 557 tttgacagaagagagagagcac 578
||||||||||||||||||||||
Sbjct: 335 tttgacagaagagagagagcac 356
>54365_ptr-miR156:pmrd
Length = 373
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 557 tttgacagaagagagagagcac 578
||||||||||||||||||||||
Sbjct: 352 tttgacagaagagagagagcac 373
>48689_mdo-miR156b:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacag 580
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48683_lsa-miR156:pmrd
Length = 355
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacag 580
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48676_lja-miR157b:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcaca 579
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcaca 22
>48654_hvv-miR156c:pmrd
Length = 178
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacag 580
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48650_hvs-miR156:pmrd
Length = 178
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcacag 580
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48529_gma-miR156b:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcaca 579
||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagagagcaca 41
>46903_aqc-miR529:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcaca 579
||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcaca 38
>46857_ahy-miR157k:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcaca 579
||||||||||||||||||||||
Sbjct: 21 ttgacagaagagagagagcaca 42
>54920_zma-miR156j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54909_zel-miR157:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54663_stu-miR157c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54662_stu-miR157b:pmrd
Length = 617
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 531 ttgacagaagagagagagcac 551
>54652_spr-miR156:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54625_sof-miR156g:pmrd
Length = 403
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54396_sbi-miR156d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54371_pts-miR156c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>51321_par-miR157:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>51319_pam-miR157:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48811_osa-miR156k:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcaca 31
>48787_nbe-miR157b:pmrd
Length = 207
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48688_mdo-miR156a:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 89 ttgacagaagagagagagcac 109
>48674_lja-miR156:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48643_han-miR157b:pmrd
Length = 364
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48632_gra-miR157c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48538_gma-miR157r:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 127 ttgacagaagagagagagcac 147
>48536_gma-miR156i:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48418_can-miR157:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>46928_ath-miR157m:pmrd
Length = 50
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 558 ttgacagaagagagagagcac 578
|||||||||||||||||||||
Sbjct: 30 ttgacagaagagagagagcac 50
>46920_ath-miR156p:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 559 tgacagaagagagagagcaca 579
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
