miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46795_miR398:micropc
Length = 101
Score = 200 bits (101), Expect = 2e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 6 caggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattg 60
Query: 66 ctgcaatcggacggtgcccgtgtgttctcaggtcgcccctg 106
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcaatcggacggtgcccgtgtgttctcaggtcgcccctg 101
>45694_miR398:micropc
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 7 aggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattgc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattgc 60
Query: 67 tgcaatcggacggtgcccgtgtgttctcaggtcgcccct 105
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaatcggacggtgcccgtgtgttctcaggtcgcccct 99
>46392_miR398:micropc
Length = 68
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 cgtgtgttctcaggtcgcccctg 106
|||||||||||||||||||||||
Sbjct: 46 cgtgtgttctcaggtcgcccctg 68
>45898_miR398:micropc
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 cgtgtgttctcaggtcgcccct 105
||||||||||||||||||||||
Sbjct: 45 cgtgtgttctcaggtcgcccct 66
>46725_miR398:micropc
Length = 67
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccctg 67
>46604_miR398:micropc
Length = 67
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccctg 67
>46371_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>46116_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>45519_miR398:micropc
Length = 61
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 41 tgtgttctcaggtcgcccctg 61
>45422_miR398:micropc
Length = 78
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctg 78
>45294_miR398:micropc
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 78 tgtgttctcaggtcgcccctg 98
>44891_miR398:micropc
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccctg 106
|||||||||||||||||||||
Sbjct: 69 tgtgttctcaggtcgcccctg 89
>46690_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46686_miR398:micropc
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcgcccct 96
>46367_miR398:micropc
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gtgttctcaggtcgcccctg 106
||||||||||||||||||||
Sbjct: 54 gtgttctcaggtcgcccctg 73
>46304_miR398:micropc
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 40 tgtgttctcaggtcgcccct 59
>46303_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46114_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>46111_miR398:micropc
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>46074_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>45930_miR398:micropc
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gtgttctcaggtcgcccctg 106
||||||||||||||||||||
Sbjct: 44 gtgttctcaggtcgcccctg 63
>45192_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcgcccct 105
||||||||||||||||||||
Sbjct: 68 tgtgttctcaggtcgcccct 87
>45087_miR398:micropc
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gtgttctcaggtcgcccctg 106
||||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccctg 84
