miRNEST 2.0, an integrative microRNA resource :: BLAST
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatactctc 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcatactctc 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>40340_rco-MIR160b:mirbase
Length = 96
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 67 ggtggcgtgcgaggagccaagcatactctc 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccac 27
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 80 gcgggtggcgtgcgaggagccaagcatac 108
|||||||||||||||||||||||||||||
Sbjct: 69 gcgggtggcgtgcgaggagccaagcatac 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 gttgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||||
Sbjct: 7 gttgtgcctggctccctgtatgccac 32
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccactggcttag 51
||||||||||||||||||||||| ||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttag 30
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagca 105
|||| |||| |||||||||||||||||||||
Sbjct: 70 ctactgcggatggcgtgcgaggagccaagca 100
>42703_zma-MIR160c:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>42677_ttu-MIR160:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccact 31
>41925_osa-MIR160c:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccact 53
>42702_zma-MIR160b:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagcat 102
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 81 ctaccgcggatggcgtgcgaggagccaagcat 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccact 44
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 107 ctactgcggatggcgtgcgaggagccaagcat 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccact 30
>41924_osa-MIR160b:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccact 44
||||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccact 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcat 112
>41923_osa-MIR160a:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagcat 86
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 91 gggtggcgtgcaaggagccaagcat 115
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 112 ctaccgcggatggcgtgcgaggagccaagcat 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccact 54
>39374_pab-MIR160a:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccac 35
>42705_zma-MIR160e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccact 31
>42704_zma-MIR160d:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccact 43
>42701_zma-MIR160a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccac 31
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccac 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 89 gggtggcgtgcaaggagccaagcat 113
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40020_ath-MIR160b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccac 42
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccac 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagcat 84
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagca 105
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccac 74
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccactggcttag 51
||||||||||||||||||||| | ||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcttag 30
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgcca 42
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gcctggctccctgtatgccac 43
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
