miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00897;mir-675;AAKN02038607.1/34464-34536 10141:Cavia porcellus
(domestic guinea pig)
Length = 73
Score = 69.9 bits (35), Expect = 6e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 22 ctggtgcgganagggcccacantggacttggtg-cactgtgtgccctaaccgctcaatcc 80
|||| ||||| |||||||||| ||||||||||| |||||| ||||||||||||||| ||
Sbjct: 9 ctggcgcggagagggcccacagtggacttggtgacactgtatgccctaaccgctcagccc 68
Query: 81 ctggg 85
|||||
Sbjct: 69 ctggg 73
>RF00897;mir-675;AF214115.1/794-866 230844:Peromyscus maniculatus
bairdii (prairie deer mouse)
Length = 73
Score = 60.0 bits (30), Expect = 6e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 19 ggactggtgcgganagggcccacantggact-tggtgcactgtgtgccctaaccgctcaa 77
||||||| ||||| |||||||||| ||||| | ||||||||| |||||||||||||||
Sbjct: 6 ggactggcgcggaaagggcccacagtggacgcttgtgcactgtatgccctaaccgctcag 65
Query: 78 tccctggg 85
|||||||
Sbjct: 66 cccctggg 73
