miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25674_xla-mir-703:mirbase
Length = 108
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/60 (96%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 46 ggttaatgataacaatgcatcgtaaaaccttcagaaggaaagaatgttttgtggaccatt 105
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 ggttaatgataacaatgcatcgtaaaaccttcagaaggaaagaatg--ttgtggaccatt 63
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 aacattctttccttctgaaggtt 49
|||||||||||||||||||||||
Sbjct: 53 aacattctttccttctgaaggtt 31
>32323_mmu-mir-703:mirbase
Length = 109
Score = 89.7 bits (45), Expect = 4e-19
Identities = 57/60 (95%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 46 ggttaatgataacaatgcatcgtaaaaccttcagaaggaaagaatgttttgtggaccatt 105
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 6 ggttaatgataacaatgcatcataaaaccttcagaaggaaagaatg--ttgtggaccatt 63
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 aacattctttccttctgaaggtt 49
|||||||||||||||||||||||
Sbjct: 53 aacattctttccttctgaaggtt 31
>27258_eca-mir-703:mirbase
Length = 64
Score = 54.0 bits (27), Expect = 2e-08
Identities = 38/41 (92%), Gaps = 3/41 (7%)
Strand = Plus / Plus
Query: 68 taaaaccttcagaaggaa---agaatgttttgtggaccatt 105
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 taaaaccttcagaaggaaaggagaatgttttgtggaccatt 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 33/36 (91%), Gaps = 3/36 (8%)
Strand = Plus / Minus
Query: 17 tggtccacaaaacatt---ctttccttctgaaggtt 49
|||||||||||||||| |||||||||||||||||
Sbjct: 39 tggtccacaaaacattctcctttccttctgaaggtt 4
