miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 178 bits (90), Expect = 2e-44
Identities = 145/162 (89%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| |||| ||||||||||||||||||||||| ||||| | || |||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatggactacatacgga 64
Query: 66 gcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgtat 125
||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||
Sbjct: 65 gcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtccatat 124
Query: 126 tgaaatc-ctagaaagacttatatttaggaacggagggagta 166
| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 125 tcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| |||||||||||||||||||||||||||| |||||| | || |||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaatatggactacatacgga 107
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
|||||||||||||||||||| |||||||||
Sbjct: 34 aaagacttatatttaggaacagagggagta 5
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 176 bits (89), Expect = 6e-44
Identities = 149/165 (90%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 5 ctacttcctccgttcctaaatataagtctttttaaagatttcactaca-gactacatacg 63
||||| |||||||||||||||||||||||||||| ||||||| ||| | |||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacg 106
Query: 64 gagcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagt-ttg 122
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
Sbjct: 105 gagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctac 46
Query: 123 tattgaaatc-ctagaaagacttatatttaggaacggagggagta 166
|| ||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 45 tagtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcacta 50
|||| |||||||||||||||||||||||||||| || ||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcacta 45
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 137 aaagacttatatttaggaacggagggagtaga 168
||||||||||||||||||||||||||||||||
Sbjct: 135 aaagacttatatttaggaacggagggagtaga 166
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 161 bits (81), Expect = 4e-39
Identities = 147/165 (89%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactaca-gactacatacgg 64
|||| |||||||||||||||||||||||||| | |||||||||| | | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 65 agcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagt-ttgt 123
|||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 124 attgaaatc-ctagaaagacttatatttaggaacggagggagtag 167
| ||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 5 ctacttcctccgttcctaaatataagtctttttaaagatttcacta 50
||||| ||||||||||||||||||||||||| || |||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcacta 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 30 aaagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 161 bits (81), Expect = 4e-39
Identities = 145/165 (87%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 4 actacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacg 63
|||||| |||||||||||||||||||| | ||||| | ||||||||| ||||||||||||
Sbjct: 165 actactccctccgttcctaaatataagaccttttacaaatttcactatagactacatacg 106
Query: 64 gagcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgt 123
||||||||||||||||| ||| | |||||||| ||| ||||||||||||||||||| |
Sbjct: 105 gagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagtttat 46
Query: 124 attgaaatc-ctagaaagacttatatttaggaacggagggagtag 167
| ||| ||| ||| || | ||||||||||||||||||||||||||
Sbjct: 45 agtgagatctctaaaaggtcttatatttaggaacggagggagtag 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 5 ctacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgg 64
||||| |||||||||||||||||||| | ||||| |||| |||||| | |||||||||||
Sbjct: 1 ctactccctccgttcctaaatataagaccttttagagatctcactataaactacatacgg 60
Query: 65 a 65
|
Sbjct: 61 a 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
||||||||||||||||||||||||||
Sbjct: 139 cttatatttaggaacggagggagtag 164
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 149 bits (75), Expect = 1e-35
Identities = 143/163 (87%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactac-agactacatacgg 64
|||| |||||||||| ||||||||| | ||||| ||||||||| |||||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 65 agcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgta 124
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 44
Query: 125 ttgaaatc-ctagaaagacttatatttaggaacggagggagta 166
| |||| ||| || | |||||||||||||||||||||||||
Sbjct: 43 gtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| |||||||||||||||||||| | ||||| ||||| |||| | ||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtactataaactacatacgga 60
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 143 bits (72), Expect = 9e-34
Identities = 143/164 (87%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactaca-gactacatacgg 64
|||| |||||||||| ||||||||| | ||||| ||||||||| | ||||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 65 agcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgta 124
||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 47
Query: 125 ttgaaatc-ctagaaagacttatatttaggaacggagggagtag 167
| |||| ||| || | ||||||||||||||||||||||||||
Sbjct: 46 gtacaatctctaaaaggtcttatatttaggaacggagggagtag 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 actacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacg 63
|||||| |||||||||||||||||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 2 actactccctccgttcctaaatataagaccttttagagattgtactataaactacatacg 61
Query: 64 ga 65
||
Sbjct: 62 ga 63
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 127 bits (64), Expect = 5e-29
Identities = 141/164 (85%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 4 actacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacg 63
|||||| ||||||||||||||||||||||||| | ||||||||||| |||| |||||||
Sbjct: 3 actactccctccgttcctaaatataagtctttggagagatttcactatagaccacatacg 62
Query: 64 gagcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgt 123
||| ||||||||||||||||| | |||||| ||||||||||||||||||| ||
Sbjct: 63 gagaaaaatgagtgaatctacac-ataaaatgcatctatatacatccgtatgtggtccac 121
Query: 124 attgaaat-cctagaaagacttatatttaggaacggagggagta 166
| |||||| ||| |||||||||||||||||||||||||||||
Sbjct: 122 agtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagtag 167
|||||||||||||||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagtag 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctt 34
|||| ||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctt 137
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 123 bits (62), Expect = 8e-28
Identities = 138/162 (85%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| ||||||||||||||||||||||||| | |||||||| || ||| |||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatggaccacatacgga 61
Query: 66 gcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgtat 125
| |||||||||||| ||| ||||||||| |||| |||||||||||||| || ||
Sbjct: 62 gtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtccatag 121
Query: 126 tgaaatc-ctagaaagacttatatttaggaacggagggagta 166
||||||| ||| ||||||||||||||||||| ||||||||||
Sbjct: 122 tgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| ||||| ||||||||||||||||||| || ||||||||||| ||| |||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcactatggaccacatacgga 104
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 31 aaagacttatatttaggaacggagggagta 2
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 123 bits (62), Expect = 8e-28
Identities = 138/162 (85%), Gaps = 6/162 (3%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| ||||||||||||||||||||||| | || ||||||||||| ||||||||||| |
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatggactacatacgaa 102
Query: 66 gcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgtat 125
||||||||||||||||||| ||||||||| ||||||||| ||||| || ||
Sbjct: 101 gcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtccatag 47
Query: 126 tgaaatc-ctagaaagacttatatttaggaacggagggagta 166
|| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 46 tggaatctctacaaagacttatatttaggaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcacta 50
|||| ||||||||||||||||||||||||| || ||||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 139 agacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||
Sbjct: 134 agacttatatttaggaacggagggagta 161
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 142/164 (86%), Gaps = 4/164 (2%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcact-acagactacatacgg 64
|||| ||||||||||||||| |||||||||||| ||||||| || | | ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 65 agcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagt-ttgt 123
|||||||||||||||||| |||| || |||||||||||||||||||||||||| |
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtcccct 121
Query: 124 attgaaa-tcctagaaagacttatatttaggaacggagggagta 166
| ||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtcttttta 38
|||| ||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttttta 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||| ||||||||||||||||||||
Sbjct: 32 aaagacttacatttaggaacggagggagta 3
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatggactacatacgga 64
Query: 66 gcaaaatgagtgaatct 82
|||||||||||||||||
Sbjct: 65 gcaaaatgagtgaatct 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 cctccgttcctaaatataagtctttttaaagatt 44
|||||||||||||||||||||| ||||| |||||
Sbjct: 110 cctccgttcctaaatataagtccttttagagatt 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 gacttatatttaggaacggaggg 162
|||||||||||||||||||||||
Sbjct: 89 gacttatatttaggaacggaggg 111
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 111 bits (56), Expect = 3e-24
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 4 actacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacg 63
|||||| |||||||||||||||||||| | ||||| | ||| |||| |||||||||||
Sbjct: 3 actactccctccgttcctaaatataagaccttttagaaattctactatggactacatacg 62
Query: 64 gagcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagtttgt 123
|| ||||| | | || ||| | ||||||||||||||||||||||||||||||||| |
Sbjct: 63 gaacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagttcat 122
Query: 124 attgaaat-cctagaaagacttatatttaggaacggagggagta 166
| || ||| |||| || | |||||||||||||||||||||||||
Sbjct: 123 agtgtaatacctaaaaggtcttatatttaggaacggagggagta 166
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
||||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagtag 4
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcactacagactacatacgga 65
|||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcactacggactacatacgaa 64
Query: 66 gcaaaatgagtgaat 80
| |||||| |||||
Sbjct: 65 gtgaaatgaatgaat 79
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 110 cgtatgtagtttgtattgaaatcct-agaaagacttatatttaggaacggagggagta 166
|||||||||| ||| ||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 62 cgtatgtagtccgtagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcacta-cagactacatacgg 64
|||| |||||||||||||||||||||||||| | | ||||||||| || ||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 65 agcaaaatgagt 76
||||||||||||
Sbjct: 91 agcaaaatgagt 80
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||||||||||||||||||
Sbjct: 122 aaagacttatatttaggaacggagggagta 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtcttt 35
|||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 136 gaaagacttatatttaggaacggagggagta 166
|||||||||||||||||||||||||||||||
Sbjct: 108 gaaagacttatatttaggaacggagggagta 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcact-acagactacatacgg 64
|||| ||||||||||||||||||||||||| ||||||| ||| || ||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtctttcgaaagattcaactaacggactacatacgg 79
Query: 65 a 65
|
Sbjct: 78 a 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 6 tacttcctccgttcctaaatataagtctttttaaagatttcacta-cagactacatacgg 64
|||| ||||||| | |||||||||||||||| | | ||||||||| | ||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 65 agcaaaat 72
||||||||
Sbjct: 65 agcaaaat 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 137 aaagacttatatttaggaacggagggagta 166
||||||||||||||| | ||||||||||||
Sbjct: 34 aaagacttatatttaagtacggagggagta 5
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 actacttcctccgttcctaaatataag 30
|||||||||||||||||||||||||||
Sbjct: 3 actacttcctccgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||||||||||| |||||
Sbjct: 29 cttatatttaggaacggaggaagtag 4
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
||||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ctacttcctccgttcctaaatataag 30
||||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa Japonica
Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagta 166
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagta 166
|||||||||||||||||||||||||
Sbjct: 52 cttatatttaggaacggagggagta 76
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 146 tatttaggaacggagggagtagaa 169
||||||||||||||||||||||||
Sbjct: 70 tatttaggaacggagggagtagaa 93
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtagaa 169
|||||||||||| |||||||||||||||
Sbjct: 29 cttatatttagggacggagggagtagaa 2
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 143 ttatatttaggaacggagggagta 166
||||||||||||||||||||||||
Sbjct: 92 ttatatttaggaacggagggagta 115
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagt 165
||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagt 6
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 141 acttatatttaggaacggagggagtag 167
|||||||||| ||||||||||||||||
Sbjct: 30 acttatattttggaacggagggagtag 4
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 132 cctagaaagacttatatttaggaacggagggagta 166
||||||||||| |||||||||||||||||||||
Sbjct: 66 cctagaaagacaagtatttaggaacggagggagta 100
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 144 tatatttaggaacggagggagta 166
|||||||||||||||||||||||
Sbjct: 67 tatatttaggaacggagggagta 89
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtaga 168
|||||||||||| ||||||||||||||
Sbjct: 69 cttatatttagggacggagggagtaga 95
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 128 aaatcctagaaagacttatatttaggaacggagggagta 166
|||| |||||| |||||||||| |||||||||||||||
Sbjct: 120 aaatgctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtaga 168
|||||||||||| ||||||||||||||
Sbjct: 29 cttatatttagggacggagggagtaga 3
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtaga 168
|||||||||||| ||||||||||||||
Sbjct: 29 cttatatttagggacggagggagtaga 3
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 144 tatatttaggaacggagggagta 166
|||||||||||||||||||||||
Sbjct: 27 tatatttaggaacggagggagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aatcctagaaagacttatatttaggaacggagggagtag 167
|||||||||| |||||||||| | ||||||||||||||
Sbjct: 119 aatcctagaatgacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtaga 168
|||||||||||| ||||||||||||||
Sbjct: 129 cttatatttagggacggagggagtaga 155
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 227 atatttaggaacggagggagta 248
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 217 atatttaggaacggagggagta 238
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 219 atatttaggaacggagggagta 240
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 atatttaggaacggagggagta 166
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 ctacttcctccgttcctaaatataagtcttttta 38
|||||||||||||||| |||||||| |||||||
Sbjct: 114 ctacttcctccgttccataatataagacttttta 81
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 82 cttatatttagggacggagggagtag 107
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 128 cttatatttagggacggagggagtag 153
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa Indica
Group
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 87 cttatatttagggacggagggagtag 112
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 tagaaagacttatatttaggaacggagggagtag 167
||||| |||||||||| ||||||||||||||||
Sbjct: 126 tagaatgacttatattgtggaacggagggagtag 159
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 126 tgaaatcctagaaagacttatatttaggaacggagggagtag 167
|||||| |||||| |||||||||| | ||||||||||||||
Sbjct: 45 tgaaatgctagaatgacttatattgtgaaacggagggagtag 4
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa Japonica
Group
Length = 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 34 cttatatttagggacggagggagtag 59
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 acttatatttaggaacggagggagta 166
||||||||||||| ||||||||||||
Sbjct: 105 acttatatttagggacggagggagta 130
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 129 cttatatttagggacggagggagtag 154
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 acttatatttaggaacggagggagta 166
|||||||||||||||||||| |||||
Sbjct: 121 acttatatttaggaacggagtgagta 146
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtag 4
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 cttatatttaggaacggagggagtag 167
|||||||||||| |||||||||||||
Sbjct: 104 cttatatttagggacggagggagtag 129
