miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 85.7 bits (43), Expect = 6e-18
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 19  tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
           ||||||||||||||||||||| | | |||||||||||||| || | |||||||   | ||
Sbjct: 4   tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63

                                 
Query: 79  atattagtttacagagggagta 100
           ||||||||||||||||||||||
Sbjct: 64  atattagtttacagagggagta 85



 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                      
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
          |||||||||||||||||||||||| | | ||||||||||||   || | |||||||   |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26

                                
Query: 76 tttatattagtttacagaggga 97
           |||||||||||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 71/82 (86%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 19  tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
           ||||||||||||||||||||| | | |||||||||||||  || | |||||||   | ||
Sbjct: 4   tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 62

                                 
Query: 79  atattagtttacagagggagta 100
           ||||||||||||||||||||||
Sbjct: 63  atattagtttacagagggagta 84



 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 70/82 (85%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                      
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
          |||||||||||||||||||||||| | | ||||||||||| |  || | |||||||   |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 26

                                
Query: 76 tttatattagtttacagaggga 97
           |||||||||||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
           |||||||||||||||  ||||| | || |||||||||||| || || | |||||||| ||
Sbjct: 9   tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68

                                      
Query: 76  tttatattagtttacagagggagtact 102
            |||||||  ||||| |||||||||||
Sbjct: 69  cttatatttctttacggagggagtact 95



 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 16  tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
           ||||||||| |||||  ||||||| ||||||||||||||||    | | |||||||||||
Sbjct: 93  tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34

                                     
Query: 76  tttatattagtttacagagggagtac 101
            | |||||  ||||||||||||||||
Sbjct: 33  ctaatatttctttacagagggagtac 8




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 75/90 (83%), Gaps = 6/90 (6%)
 Strand = Plus / Minus

                                                                       
Query: 14  tatactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaaca 73
           |||||||||||||||||  ||||||| ||||||||||||      ||| | |||||||| 
Sbjct: 84  tatactccctctgtaaagaaatataagagcgtttagatc------atagtgatctaaacg 31

                                         
Query: 74  cttttatattagtttacagagggagtactt 103
           || |||||||  ||||||||||||||||||
Sbjct: 30  ctcttatatttctttacagagggagtactt 1



 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 71/85 (83%), Gaps = 6/85 (7%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
           |||||||||||||||  ||||||| |||||||||||||||      || |||||||| ||
Sbjct: 4   tactccctctgtaaagaaatataagagcgtttagatcact------atgatctaaacgct 57

                                    
Query: 76  tttatattagtttacagagggagta 100
            |||||||  |||||||||||||||
Sbjct: 58  cttatatttctttacagagggagta 82




>54753_tae-miR2033b:pmrd
          Length = 72

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                   
Query: 16 tactccctctgtaaactaatataanagcgtttagatcacta 56
          |||||| ||||||||  ||||||| || |||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcacta 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 65  atctaaacacttttatattagtttacagagggagta 100
           ||||||||||| |||||||  |||||||| ||||||
Sbjct: 37  atctaaacactcttatatttctttacagaaggagta 72