miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 131 bits (66), Expect = 2e-30
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttggg 64
Query: 83 tcatctattttggaacggagggagta 108
||||||||||||||||||||||||||
Sbjct: 65 tcatctattttggaacggagggagta 90
Score = 117 bits (59), Expect = 4e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
|||||||||||||||||||||||||| |||||||| ||||| |||||| |||| ||||
Sbjct: 90 tactccctccgttccaaaatagatgacccaactttacactaaagttagtacaaagttgag 31
Query: 83 tcatctattttggaacggagggagtat 109
|||||||||||||||||||||||||||
Sbjct: 30 tcatctattttggaacggagggagtat 4
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 117 bits (59), Expect = 4e-26
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 20 atgtactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagct 79
||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||| |
Sbjct: 2 atgtactccttccgttccaaaatagatgacccaactttgtactaaagttagtacaaagtt 61
Query: 80 gagtcatctattttggaacggagggagtata 110
||||||||||||||| |||||||| ||||||
Sbjct: 62 gagtcatctattttgaaacggaggaagtata 92
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
|||| |||||||| |||||||||||| |||||||||||||||||||||| |||| || |
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttggg 31
Query: 83 tcatctattttggaacggagggagta 108
||||||||||||||||||| ||||||
Sbjct: 30 tcatctattttggaacggaaggagta 5
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 113 bits (57), Expect = 6e-25
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctga 81
||||| ||||| ||||||||||||||| ||||||||||||||| |||||| |||| |||
Sbjct: 4 gtacttcctccattccaaaatagatgacccaactttgtactaaagttagtacaaagttga 63
Query: 82 gtcatctattttggaacggagggagtata 110
|||||||||||||||| ||||||||||||
Sbjct: 64 gtcatctattttggaatggagggagtata 92
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
|||||||||| ||||||||||||||| |||||||||||||||||||||| |||| || |
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttggg 31
Query: 83 tcatctattttggaacggagggagta 108
||||||||||||||| ||||| ||||
Sbjct: 30 tcatctattttggaatggaggaagta 5
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 87/101 (86%), Gaps = 11/101 (10%)
Strand = Plus / Minus
Query: 19 catgtactccctccgttccaaaatagatgatccaactttgtactaact-----------t 67
|||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 105 catgtactccctccgttccaaaatagatgacccaactttttactaactttatattaaagt 46
Query: 68 tagtataaagctgagtcatctattttggaacggagggagta 108
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 45 tagtataaagttgagtcatctattttggaacggagggagta 5
Score = 79.8 bits (40), Expect = 8e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaactttagtataaag 77
||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 4 gtactccctccgttccaaaatagatgactcaactttatactaactttaatataaag 59
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 87.7 bits (44), Expect = 3e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
|||||||||||||| |||||||| || ||||||||||||| |||||||| |||| ||||
Sbjct: 90 tactccctccgttctaaaatagacgactcaactttgtactatctttagtacaaagttgag 31
Query: 83 tcatctattttg 94
||||||||||||
Sbjct: 30 tcatctattttg 19
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 37 caaaatagatgatccaactttgtactaactttagtataaagctgagtcatctattttgga 96
|||||||||||| |||||||||||||| ||||| |||| |||||| |||||||| ||
Sbjct: 19 caaaatagatgactcaactttgtactaaagatagtacaaagttgagtcgtctattttaga 78
Query: 97 acggagggagta 108
||||||||||||
Sbjct: 79 acggagggagta 90
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 81/97 (83%), Gaps = 11/97 (11%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaact-----------ttagt 71
|||||||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct: 101 tactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattagt 42
Query: 72 ataaagctgagtcatctattttggaacggagggagta 108
| |||| ||||||||||||||||||||||||||||||
Sbjct: 41 acaaagttgagtcatctattttggaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 81/98 (82%), Gaps = 11/98 (11%)
Strand = Plus / Plus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaact-----------ttag 70
||||||||||||||||||||||||||| |||||||||||||| | ||||
Sbjct: 4 gtactccctccgttccaaaatagatgactcaactttgtactaattttgtactatagttag 63
Query: 71 tataaagctgagtcatctattttggaacggagggagta 108
|| |||| ||||||||||||||| ||||||||||||||
Sbjct: 64 tacaaagttgagtcatctattttagaacggagggagta 101
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctga 81
||||||||||||| ||||| || ||| ||||||| |||||||||||||| |||| |||
Sbjct: 91 gtactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttga 32
Query: 82 gtcatctattttggaacggagggagtatat 111
|||| |||||||| || ||||||||||||
Sbjct: 31 gtcacttattttgggacagagggagtatat 2
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaagctgag 82
||||||||| || |||||||| ||| |||||||||||||| ||||||||||| ||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagttgag 64
Query: 83 tcatctattttggaacggagggagta 108
||| || ||||| ||||||||||||
Sbjct: 65 tcacttaatttgggacggagggagta 90
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtacta 63
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 64 tactccctccgttccaaaatagatgacccaactttgtacta 24
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 68 tagtataaagctgagtcatctattttggaacggagggagtata 110
||||| |||| || |||||||||||||||||||||||||||||
Sbjct: 24 tagtacaaagttgggtcatctattttggaacggagggagtata 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ctattttggaacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ctattttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatag 44
||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatag 26
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagtata 110
|||||||| ||||||||||||| |||| ||||||| |||||||| ||||||||||||||
Sbjct: 43 caactttgcactaactttagtacaaagttgagtcacttattttgggacggagggagtata 102
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaa 64
|||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtactaa 59
>RF00906;MIR1122;FJ436986.1/109208-109327 37682:Aegilops tauschii
Length = 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaacttta 69
||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 4 gtactccttccgttccaaaatagatgacccaactttgtattaacttta 51
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaacttta 69
||||||| |||||| |||||||||||| ||||||||||| ||||||||
Sbjct: 117 gtactccttccgtttcaaaatagatgacccaactttgtattaacttta 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gtcatctattttggaacggagggagta 108
|||||||||||||||||||| ||||||
Sbjct: 31 gtcatctattttggaacggaaggagta 5
>RF00906;MIR1122;U76215.1/3218-3297 4565:Triticum aestivum (bread
wheat)
Length = 80
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 74 aaagctgagtcatctattttggaacggagggagta 108
|||| ||||||||||||||||||||||||||||||
Sbjct: 39 aaagttgagtcatctattttggaacggagggagta 5
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 74 aaagctgagtcatctattttggaacggagggagt 107
|||| |||||||||||||||||||||||||||||
Sbjct: 42 aaagttgagtcatctattttggaacggagggagt 75
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatagatgatccaactttg 58
|||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttg 40
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 24 actccctccgttccaaaatagatgatccaactttg 58
||||||||||||||||||||||||| ||||||||
Sbjct: 75 actccctccgttccaaaatagatgactcaactttg 41
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaag 77
|||||||||||| |||||||| ||| |||||||||| ||||||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaag 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagta 108
|||||||||||||| ||| || |||| |||| ||| |||||||| ||||||||||||
Sbjct: 44 caactttgtactaaagttaatacaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 catgtactccctccgttccaaaatag 44
||||||||||||||||||||||||||
Sbjct: 1 catgtactccctccgttccaaaatag 26
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 agtcatctattttggaacggagggagta 108
||||| ||||||||||||||||||||||
Sbjct: 32 agtcaactattttggaacggagggagta 5
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagta 72
|||||||||||| |||||||| ||| |||||||||| |||||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagta 52
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagta 108
|||| ||||||||| ||| || |||| |||| ||| |||||||| ||||||||||||
Sbjct: 44 caaccttgtactaaagttaatacaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaacttt 68
|||||||||||| |||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtactaacttt 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 67 ttagtataaagctgagtcatctattttggaacggagggagtat 109
|||||| |||| ||||||| |||||||| |||||||||||||
Sbjct: 46 ttagtacaaagttgagtcacttattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 21 tgtactccctccgttccaaaatagatgatccaactttgtactaactttag 70
||||||| |||| | |||||||| ||| ||||||||||||||||||||
Sbjct: 130 tgtactcgctccatcccaaaataagtgactcaactttgtactaactttag 81
>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 81 agtcatctattttggaacggagggagtata 110
||||||||| ||||||||||||||||||||
Sbjct: 32 agtcatctaatttggaacggagggagtata 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 tcatctattttggaacggagggagtata 110
||||||| ||||||||||||||||||||
Sbjct: 106 tcatctaatttggaacggagggagtata 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaaatagatga 48
|||||||||||||||||| |||||||
Sbjct: 5 tactccctccgttccaaattagatga 30
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatga 48
|||||||||||||||||| |||||||
Sbjct: 131 tactccctccgttccaaattagatga 106
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtatat 111
||||||||||||||||||||||||
Sbjct: 98 tattttggaacggagggagtatat 121
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagtata 110
|||||||||||||| |||||| ||| |||| || |||||||| ||||||||||||||
Sbjct: 92 caactttgtactaaagttagtacaaacttgagacagttattttgggacggagggagtata 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaag 77
|||||||||||| |||||||| || ||| |||||||||||||||||| ||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaag 95
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 22 gtactccctccgttccaaaatagatgatccaactttgtactaactttagtataaag 77
||||||||||||| |||||||| || ||||||||||||||||||||| ||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaag 47
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagta 108
|||||||||||||| |||||| |||| | || || |||||||| ||||||||||||
Sbjct: 44 caactttgtactaaagttagtacaaagttaagacacttattttgggacggagggagta 101
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 21 tgtactccctccgttccaaaata 43
|||||||||||||||||||||||
Sbjct: 134 tgtactccctccgttccaaaata 112
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtca 85
|||||||||||||||||||||| ||| |||||||
Sbjct: 44 caactttgtactaactttagtacgaagttgagtca 78
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtata 110
|||||||||||||||||||||||
Sbjct: 143 tattttggaacggagggagtata 165
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtata 110
|||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtata 3
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaag 77
||||||||||||| ||||||| ||| ||||||||||||| || ||||| ||||
Sbjct: 101 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaag 47
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagta 108
||||||||||||| ||||| |||| |||| ||| ||||||| |||||||||||||
Sbjct: 44 caactttgtactagagctagtacaaagttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtata 110
|||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtata 3
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 81 tattttggaacggagggagtat 102
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 51 caactttgtactaactttagtataaagctgagtcatctattttggaacggagggagtat 109
|||||||||||||| |||||| |||| |||| || |||||||| | |||||||||||
Sbjct: 51 caactttgtactaaagttagtacaaagttgagacacttattttgggatggagggagtat 109
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 51 caactttgtactaactttagtataaag 77
|||||||||||||||||||||| ||||
Sbjct: 80 caactttgtactaactttagtacaaag 54
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 133 tattttggaacggagggagtat 154
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 131 tattttggaacggagggagtat 152
>RF00906;MIR1122;ABXC01000529.1/263619-263734 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 ttttggaacggagggagtatat 111
||||||||||||||||||||||
Sbjct: 23 ttttggaacggagggagtatat 2
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaaatagatgatccaactttgtactaactttagtataaa 76
|||||||||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 100 tactccctccgtcccaaaataagtg-tctcactttgtactaactctagtataaa 48
>RF00906;MIR1122;EU660899.1/111846-111744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 103
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 110 tattttggaacggagggagtat 131
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 89 attttggaacggagggagtata 110
||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtata 3
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 68 tagtataaagctgagtcatctattttggaacggagggagtat 109
|||||||||| |||| || |||||||| |||||||||||||
Sbjct: 61 tagtataaagttgagacagttattttgggacggagggagtat 102
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 68 tagtataaagctgagtcatctattttggaacggagggagtat 109
|||||||||| |||| || |||||||| |||||||||||||
Sbjct: 61 tagtataaagttgagacagttattttgggacggagggagtat 102
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 86 tctattttggaacggagggagtatat 111
|||||||||| |||||||||||||||
Sbjct: 27 tctattttgggacggagggagtatat 2
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa Japonica
Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 86 tctattttggaacggagggagtatat 111
|||||||||| |||||||||||||||
Sbjct: 27 tctattttgggacggagggagtatat 2
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttggaacggagggagtat 109
||||||||||||||||||||||
Sbjct: 71 tattttggaacggagggagtat 92
