miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 12 tattacctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacac 71
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 100 tattacctccgtcccaaaaagcttgtcttagatttatctagatacggatgtatctaacac 41
Query: 72 taaa 75
||||
Sbjct: 40 taaa 37
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 90 atccgtatcttgacaaatctaagacaagctttttggaacggagg 133
|||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 52 atccgtatctagataaatctaagacaagctttttgggacggagg 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 104 aaatctaagacaagctttttggaacggagggagta 138
|||||||| ||||||||||||| ||| ||||||||
Sbjct: 39 aaatctaaaacaagctttttgggacgaagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 gtcccaaaaagcttgtcttagattta 47
|||||||||||||||| |||||||||
Sbjct: 15 gtcccaaaaagcttgttttagattta 40
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 105 bits (53), Expect = 2e-22
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaa 76
|||| ||||||||| || ||||||||||| | |||||| | |||| |||||||||||||
Sbjct: 126 cctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacactaaaa 67
Query: 77 catgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacggagggag 136
|||| |||||| |||||||| | |||||||||| |||||| |||||| ||||||||||
Sbjct: 66 catgactagatacatccgtatttagacaaatctatgacaagaattttgggacggagggag 7
Query: 137 tat 139
|||
Sbjct: 6 tat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatcta 67
|||| ||||||||| |||||| ||||||| | || |||||||||||||||
Sbjct: 10 cctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatcta 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 102 acaaatctaagacaagctttttggaacggagggagtat 139
||||||||||||| || |||||| |||||||||||||
Sbjct: 95 acaaatctaagacnagaattttgggacggagggagtat 132
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 101 bits (51), Expect = 3e-21
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 33 cttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtctagatnaatc 92
|||||||||||||| ||||||||||||||||||| |||||||| || || ||| |||
Sbjct: 110 cttgtcttagatttgcctagatacggatgtatctaatactaaaacgtgacttgatacatc 51
Query: 93 cgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||| | ||||||||||||||||| |||||| ||||||||||||
Sbjct: 50 cgtatttagacaaatctaagacaagaattttgggacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 90 atccgtatcttgacaaatctaagacaagctttttggaacggagggagtat 139
|||||||||| | ||||||||||||||| |||||||||||||| |||||
Sbjct: 83 atccgtatctaggcaaatctaagacaagaattttggaacggaggaagtat 132
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatc 65
|||| ||||||||| |||||||||||||| | || |||||||||||||
Sbjct: 10 cctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatc 58
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 93.7 bits (47), Expect = 6e-19
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaa 76
||||||||||||| |||||||||||||| | ||||||| ||||||||||| || ||||
Sbjct: 126 cctctgtcccaaatttcttgtcttagatttgtctagatacagatgtatctaatacgaaaa 67
Query: 77 catgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacggagggag 136
|| || ||| |||||||||| ||||||||||||||||| |||||| || |||||||
Sbjct: 66 tgtgacttgatacatccgtatctagacaaatctaagacaagaattttgggaccgagggag 7
Query: 137 ta 138
||
Sbjct: 6 ta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatc 65
|||| ||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 10 cctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatc 58
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 93.7 bits (47), Expect = 6e-19
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 33 cttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtctagatnaatc 92
|||||||||||||| | |||||||||| |||||| |||||||| |||||||| |||
Sbjct: 26 cttgtcttagatttgtctagatacggagatatctagcactaaaatgagtctagatacatc 85
Query: 93 cgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 86 cgtatctagacaaatccaagacaagtaatttggaacggagggagta 131
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 91 tccgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 52 tccgtatctagacaaatctaagacaagtaattcggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 33 cttgtcttagatttatgtagatacggatgtatcta 67
|||||||| ||||| | ||||||||||||||||||
Sbjct: 110 cttgtcttggatttgtctagatacggatgtatcta 76
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 15 tacctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaa 74
|||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 128 tacctccgtcccaaaattcttgtctaggatttatctagatacggatgtatctaacactaa 69
Query: 75 aacatgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacggaggg 134
||| || |||||| |||| ||| | || |||| |||||| || ||||| | ||||||
Sbjct: 68 aacgtgactagatacatccatatttagagaaatttaagaccagaattttgagatggaggg 9
Query: 135 agtat 139
|||||
Sbjct: 8 agtat 4
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 15 tacctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaa 74
|||||| |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 8 tacctccgtcccagaaagcttgtctaagatttatctagatacggatgtatctaacgctaa 67
Query: 75 a 75
|
Sbjct: 68 a 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 90 atccgtatcttgacaaatctaagacaagctttttggaacggagggagtat 139
|||||||||| || |||||| ||||||||||| ||| ||||||| |||||
Sbjct: 53 atccgtatctagataaatcttagacaagctttctgggacggaggtagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 104 aaatctaagacaagctttttggaacggagggagta 138
|||||||| ||||| ||||||| ||||||||||||
Sbjct: 66 aaatctaaaacaagttttttgggacggagggagta 100
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 23 tcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtc 82
|||||||| ||||||||| |||| | |||||| ||||||||||||||||||| | |
Sbjct: 16 tcccaaaattcttgtcttacatttgtttagataaagatgtatctaacactaaaatgtaac 75
Query: 83 tagatnaatccgtatcttgacaaatctaagacaagctttttggaacggaggg 134
||||| |||||||| | ||||||| ||||||||| |||||| ||||||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatcta 67
|||| ||||||||| ||||||||| |||| | || |||||||||||||||
Sbjct: 126 cctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 76
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 23 tcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtc 82
|||||||| ||||||||| |||| | ||||||||||||||||||||||||||| | |
Sbjct: 120 tcccaaaattcttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaac 61
Query: 83 tagatnaatccgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
|| || |||| ||| | ||||||| |||||||| |||||| ||||||||||||
Sbjct: 60 tacatacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaa 76
|||| ||||||||| |||||||||||||| | |||||| |||||||||||| |||||||
Sbjct: 126 cctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatctaatactaaaa 67
Query: 77 catgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacggagggag 136
| || | ||| |||| ||| | || |||||||||||||| |||||| || || ||||
Sbjct: 66 cgtgagttgatacatccctatttagaaaaatctaagacaagaattttgggacagaaggag 7
Query: 137 tat 139
|||
Sbjct: 6 tat 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 90 atccgtatcttgacaaatctaagacaagctttttggaacggagggagtat 139
|||| ||||| ||||||||||||||||| |||||| |||||||||||||
Sbjct: 83 atccatatctagacaaatctaagacaagaattttgggacggagggagtat 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 19 tctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatc 65
|||||||||||| |||||||||||||| | || ||| |||||||||
Sbjct: 12 tctgtcccaaaattcttgtcttagatttttctaaatagggatgtatc 58
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 33 cttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtctagatnaatc 92
||||||||| |||| | ||||||| |||||| ||| ||||||| ||| || || |||
Sbjct: 26 cttgtcttacatttgtctagatacatatgtatttaatactaaaatatgacttcatacatc 85
Query: 93 cgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||| | ||||||||||||||||| |||||| | ||||||||||
Sbjct: 86 cgtatttagacaaatctaagacaagaattttgggatggagggagta 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 94 gtatcttgacaaatctaagacaagctttttggaacggagggagtat 139
|||||| ||||||| ||||||||| ||||| |||||||||||||
Sbjct: 49 gtatctagacaaatgtaagacaagaattttgagacggagggagtat 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 tcccaaaaagcttgtcttagatttatgtagatacggatgtat 64
|||||||| |||||||||||||| | || ||||||||||||
Sbjct: 120 tcccaaaattcttgtcttagatttgtctaaatacggatgtat 79
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 33 cttgtcttagatttatgtagatacggatgtatctaacactaaaacatgtctagatnaatc 92
|||||||| ||||| | ||||||| ||| | |||| |||||||| |||||||| |||
Sbjct: 110 cttgtcttcgatttgtctagatacagatatgtctagcactaaaatgagtctagatacatc 51
Query: 93 cgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||||| ||||||| ||||||||| || ||||||||||||||
Sbjct: 50 cgtatctagacaaatttaagacaagtaattcagaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 94 gtatcttgacaaatctaagacaagctttttggaacggagggagta 138
|||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 87 gtatctagacaaatcgaagacaagtaatttggaacggagggagta 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 33 cttgtcttagatttatgtagatacggatgtatcta 67
||||||||| |||| | ||||||||||||||||||
Sbjct: 26 cttgtcttaaatttgtctagatacggatgtatcta 60
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 102 acaaatctaagacaagctttttggaacggagggagtat 139
|||||||||||||||| ||||||||||||||||||||
Sbjct: 41 acaaatctaagacaagaattttggaacggagggagtat 4
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 101 gacaaatctaagacaagctttttggaacggagggagtat 139
||||||||||||||||| |||||||||| |||||||||
Sbjct: 42 gacaaatctaagacaagaattttggaacgaagggagtat 4
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacgga 59
|||| ||||||||| |||||||||||||||| ||||||||||
Sbjct: 96 cctccgtcccaaaattcttgtcttagatttatttagatacgga 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 33 cttgtcttagatttatgtagatacggatgt 62
|||||||||||||||| |||||||||||||
Sbjct: 25 cttgtcttagatttatctagatacggatgt 54
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 91 tccgtatcttgacaaatctaagacaagctttttggaacggagggagta 138
||||||||| | |||||||||||||| |||||| ||||||||||||
Sbjct: 54 tccgtatctaaataaatctaagacaagaattttgggacggagggagta 101
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 95 tatcttgacaaatctaagacaagctttttggaacggagggagtatc 140
||||| ||||||||||||||||| |||| | ||||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaattttaggacggagggagtatc 3
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 101 gacaaatctaagacaagctttttggaacggagggagtatcat 142
|||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 94 gacaaagctaagacaagaattttggaatggagggagtatcat 135
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 70 actaaaacatgtctagatnaatccgtatcttgacaaatctaagacaagctttttggaacg 129
|||||||| || |||||| || | ||||| ||||||| ||||||||| |||||| |||
Sbjct: 73 actaaaacgtgactagatacattcatatctagacaaatgtaagacaagaattttgggacg 14
Query: 130 gagggagta 138
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 102 acaaatctaagacaagctttttggaacggagggagtat 139
|||||||||||||||| |||||||||||||| |||||
Sbjct: 96 acaaatctaagacaagaattttggaacggaggtagtat 133
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 95 tatcttgacaaatctaagacaagctttttggaacggagggagtat 139
||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaagtttgggacggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 101 gacaaatctaagacaagctttttggaacggagggagtat 139
|||||| |||||||||| |||||| |||||||||||||
Sbjct: 101 gacaaacctaagacaagaattttgggacggagggagtat 139
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 108 ctaagacaagctttttggaacggagggagtat 139
|||||||||| ||||||||||||||||||||
Sbjct: 102 ctaagacaagaattttggaacggagggagtat 133
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 58 gatgtatctaac-actaaaacatgtctagatnaatccgtatcttgacaaatctaagacaa 116
||||||||||| |||||||| || |||||| || | ||||| |||||||||||||||
Sbjct: 86 gatgtatctaattactaaaacttgactagatacattcatatctaaacaaatctaagacaa 27
Query: 117 gctttttggaacggagggagta 138
|||||| ||||||||||||
Sbjct: 26 taattttgggacggagggagta 5
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 106 atctaagacaagctttttggaacggagggagtatc 140
|||||||||||| |||||| ||||||||||||||
Sbjct: 100 atctaagacaagaattttgggacggagggagtatc 134
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 57 ggatgtatctaac-actaaaacatgtctagatnaatccgtatcttgacaaatctaagaca 115
|||||||||||| ||||||||||| |||||| || | ||| | |||||||||||||||
Sbjct: 87 ggatgtatctaaatactaaaacatgactagatacattcatatttagacaaatctaagaca 28
Query: 116 ag 117
||
Sbjct: 27 ag 26
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 120 ttttggaacggagggagtatcat 142
|||||||||||||||||||||||
Sbjct: 23 ttttggaacggagggagtatcat 1
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 17 cctctgtcccaaaaagcttgtcttagatttatgtagatacggatgtatctaacactaaaa 76
|||| ||||||||| ||||| ||| ||| | ||||||||||||||||||| || ||||
Sbjct: 126 cctccgtcccaaaattcttgttgtagctttgtctagatacggatgtatctaatacaaaaa 67
Query: 77 catgtctagatnaatccgtatcttgacaaatctaagacaag 117
| || || ||| || ||| | | ||||||| |||||||||
Sbjct: 66 cgtgacttgatacattcgtctttagacaaatttaagacaag 26
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 80/97 (82%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 43 atttatgtagatacggatgtatcta-acactaaaacatgtctagatnaatccgtatcttg 101
|||||| |||| ||||||||||||| |||||||| || || ||||| |||||| | | |
Sbjct: 100 atttatctagacacggatgtatctagacactaaa-caagtatagatacatccgtgtttag 42
Query: 102 acaaatctaagacaagctttttggaacggagggagta 138
|||||| ||| ||| |||||||||||||||||||
Sbjct: 41 acaaattcaagtcaactattttggaacggagggagta 5
