miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 77  gtatgtagacatattttagagtgtagattcnctcattttgctttgtatgtagtc 130
           |||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 192 gtatatagacatattttagagtgtagattcactcattttacttcgtatgtagtc 245




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 131 acttgttgaaatctctagaaagacaaata 159
           |||||||||||||||||||||||||||||
Sbjct: 1   acttgttgaaatctctagaaagacaaata 29




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 89  attttagagtgtagattcnctcattttgctttgtatgtagtcacttgttgaaatctctag 148
           ||||||||||||||||||  | ||||||||  |||||||||| | |  || ||| |||| 
Sbjct: 90  attttagagtgtagattcatttattttgctccgtatgtagtc-catagtggaatttctat 32

                                         
Query: 149 aaagacaaatatttaggaacggagggagta 178
           ||||||  |||||||||||||||| |||||
Sbjct: 31  aaagacttatatttaggaacggagagagta 2



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 139 aaatctctagaaagacaaatatttaggaacggagggagtat 179
           ||||||||| ||||||  |||||||| ||||||||||||||
Sbjct: 124 aaatctctacaaagacttatatttagaaacggagggagtat 164




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 157 atatttaggaacggagggagta 178
           ||||||||||||||||||||||
Sbjct: 27  atatttaggaacggagggagta 6



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 tactccctccgttcctaaatat 35
          ||||||||||||||||||||||
Sbjct: 6  tactccctccgttcctaaatat 27




>50427_osa-miRf11212-akr:pmrd
          Length = 152

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 tatttaggaacggagggagtatata 182
           |||||||| ||||||||||||||||
Sbjct: 32  tatttagggacggagggagtatata 8



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 tatttaggaacggagggagtatat 181
           |||||||| |||||||||||||||
Sbjct: 121 tatttagggacggagggagtatat 144