miRNEST 2.0, an integrative microRNA resource :: BLAST
>40342_rco-MIR162:mirbase
Length = 101
Score = 93.7 bits (47), Expect = 3e-20
Identities = 89/99 (89%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggagattttttgttctgaa-ctgcaataaa 79
||||||||||||||||||||||||||||||||| | ||||||| |||| | ||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctgga-agattttgttgtgaaacaaaaataaa 62
Query: 80 -cacatgaatcgatcgataaacctctgcatccagcgctt 117
| ||||||||||||||||||||||||||||||||||||
Sbjct: 63 acgcatgaatcgatcgataaacctctgcatccagcgctt 101
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 79.8 bits (40), Expect = 5e-16
Identities = 85/96 (88%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 79
||||||||||||||||||||||||||||||| ||| |||| ||| ||| | | | |||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctg-agaatttt-gttgtgagaataacacaaa 81
Query: 80 cacatgaatcgatcgataaacctctgcatccagcgc 115
|||||||||||||||||||||||||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccagcgc 117
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 75.8 bits (38), Expect = 7e-15
Identities = 84/98 (85%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggaga-ttttttgttctgaactgcaataaa 79
|||||||||||||||||||||||||||||||| | ||||||||| | || |||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg-----aaa 65
Query: 80 cacatgaatcgatcgataaacctctgcatccagcgctt 117
||||||| |||||||||||||||||||||||||||||
Sbjct: 66 aacatgaaccgatcgataaacctctgcatccagcgctt 103
>39813_aly-MIR162b:mirbase
Length = 184
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 82 catgaatcgatcgataaacctctgcatccagcgctta 118
|||||||||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcgctta 139
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 gtgaagtcgctggaggcagcggttcatcgatc 43
||||||||||||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
>39812_aly-MIR162a:mirbase
Length = 228
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 16 agtcgctggaggcagcggttcatcgatctcttcctgg 52
|||||||||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctgg 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 82 catgaatcgatcgataaacctctgcatccagcg 114
||||||| |||||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
>41220_csi-MIR162:mirbase
Length = 201
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 81 acatgaatcgatcgataaacctctgcatccagcgct 116
||||||||||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatccagcgct 185
>40024_ath-MIR162a:mirbase
Length = 140
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 16 agtcgctggaggcagcggttcatcgatctcttcctg 51
||||||||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 82 catgaatcgatcgataaacctctgcatccagcg 114
||||||| |||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
>40437_gma-MIR162:mirbase
Length = 102
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 82 catgaatcgatcgataaacctctgcatccagcgct 116
|||||||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgct 97
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 12 gtgaagtcgctggaggcagcggttcatcgatctcttcctg 51
|||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctg 40
>41090_tcc-MIR162:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 80/93 (86%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 79
|||||||||||||||||||||||||||||||| | ||||||| ||| | | | |||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaa--ttttgttgtgagaataacacaaa 78
Query: 80 cacatgaatcgatcgataaacctctgcatccag 112
|||||| |||||||||||||||||||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 15 aagtcgctggaggcagcggttcatcgatctcttcctgg 52
||||| ||||||||||||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgg 44
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 81 acatgaatcgatcgataaacctctgcatccagcg 114
||||||||||||||||||||||||||||||||||
Sbjct: 69 acatgaatcgatcgataaacctctgcatccagcg 102
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggagatttttt 61
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaagatttttt 51
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctggagatttttt 61
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaagatttttt 51
>40663_mtr-MIR162:mirbase
Length = 124
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 81 acatgaatcgatcgataaacctctgcatccagcgct 116
|||||||||| |||||||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccagcgct 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctg 51
||||| |||||||||||||||||| ||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctg 51
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 gtgaagtcgctggaggcagcggttcatcgatc 43
||||||||||||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccagcgct 116
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
>41578_vvi-MIR162:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tgaagtcgctggaggcagcggttcatcgatctcttcctg 51
||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctg 39
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccagcg 114
|||||| |||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcg 95
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccag 112
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccag 112
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatcc 110
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccag 112
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccag 112
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 gaatcgatcgataaacctctgcatccag 112
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
