miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 224 bits (113), Expect = 2e-59
Identities = 164/181 (90%)
Strand = Plus / Plus
Query: 28 caattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatga 87
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 43 caattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatga 102
Query: 88 tttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaa 147
||| |||||||||||||| | ||||||||||||||||| |||| ||||| | |||||||
Sbjct: 103 tttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataaa 162
Query: 148 ttcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaat 207
||||||||| ||||| | || ||||| ||||||||||||||||||||| || ||||||||
Sbjct: 163 ttcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaat 222
Query: 208 a 208
|
Sbjct: 223 a 223
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 224 bits (113), Expect = 2e-59
Identities = 164/181 (90%)
Strand = Plus / Plus
Query: 28 caattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatga 87
||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 44 caattacacagtttacgtgtaaattgcgagacaaatcttttaagtctaattgcgccatga 103
Query: 88 tttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaa 147
||| |||| |||||| || |||||| ||||||||||||| |||| |||||||||||||||
Sbjct: 104 tttgacaacgtggtggtacagtaaatatttgctaatgatagattaattaggcttaataaa 163
Query: 148 ttcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaat 207
||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 164 ttcgtctcgtagttttctggcggaatctgtaatttattttgttattagacaacgtttaat 223
Query: 208 a 208
|
Sbjct: 224 a 224
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 216 bits (109), Expect = 5e-57
Identities = 163/181 (90%)
Strand = Plus / Plus
Query: 28 caattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatga 87
||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 46 caatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatga 105
Query: 88 tttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaa 147
||| |||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||
Sbjct: 106 tttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataaa 165
Query: 148 ttcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaat 207
|||| |||| ||||| ||| |||||||||||||| ||||||||||||||| |||||||
Sbjct: 166 ttcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaat 225
Query: 208 a 208
|
Sbjct: 226 a 226
>42079_osa-MIR442:mirbase
Length = 233
Score = 206 bits (104), Expect = 5e-54
Identities = 161/180 (89%)
Strand = Plus / Plus
Query: 29 aattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgat 88
||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 41 aattatacagatgacgtgtaaattgcgagacgaatcttttaagcctaattgctccatgat 100
Query: 89 ttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaat 148
| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 101 ctgacaatgtggtgctacagtaaacatttgctaatgacggattaattaggcttaataaat 160
Query: 149 tcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaata 208
|||||||| ||||| | ||| ||||||||||||||||||||||| || |||| ||||
Sbjct: 161 tcgtctcgcagtttacagacggattctgtaatttgttttgttattagtctacgttaaata 220
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 tgtaaattgcgagacgaatcttttaagcctaatt 78
|||||| |||||||||||| | ||||||||||||
Sbjct: 177 tgtaaactgcgagacgaatttattaagcctaatt 144
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 200 bits (101), Expect = 3e-52
Identities = 161/181 (88%)
Strand = Plus / Plus
Query: 28 caattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatga 87
||||| |||||||||| ||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 45 caattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatga 104
Query: 88 tttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaa 147
||| |||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 105 tttgacaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaa 164
Query: 148 ttcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaat 207
|| |||||| ||||| || ||||||||||||||||||||||||||| || ||||||||
Sbjct: 165 tttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaat 224
Query: 208 a 208
|
Sbjct: 225 a 225
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 198 bits (100), Expect = 1e-51
Identities = 160/180 (88%)
Strand = Plus / Plus
Query: 29 aattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgat 88
||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 47 aattacatagattgcgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgat 106
Query: 89 ttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaat 148
| |||||||||||||| |||||||||||| |||| ||||||| || |||||||||||||
Sbjct: 107 ctgacaatgtggtgctacagtaaacatttgttaataatggattaatcaggcttaataaat 166
Query: 149 tcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaata 208
||| |||||||||| |||||||||||||||||||| ||| |||| || |||||||||
Sbjct: 167 tcgcctcgtagtttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaata 226
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 174 bits (88), Expect = 2e-44
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 29 aattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgat 88
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct: 48 aattacacagattgcgtgtaaattgcgacacgaatcttttaagcataattgctccatgat 107
Query: 89 ttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaat 148
| |||||||| ||||| ||||||||||||||||| | | ||| ||||| ||||||||||
Sbjct: 108 ctgacaatgtgatgctacagtaaacatttgctaataacgaattaattagtcttaataaat 167
Query: 149 tcgtctcgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaata 208
|||||||| |||| || ||| ||| ||||||||||||||||||| || | |||||||
Sbjct: 168 tcgtctcgcggtttacaggcggattctctaatttgttttgttattagtctacatttaata 227
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 174 bits (88), Expect = 2e-44
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 29 aattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgat 88
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 49 aattacacagattgcgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgat 108
Query: 89 ttaacaatgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaat 148
|| ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 109 ttgacaatatggtgctacagtaaacatttgctaataccggattaattaggcttaataaat 168
Query: 149 tcgt 152
||||
Sbjct: 169 tcgt 172
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 147 bits (74), Expect = 4e-36
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 35 acagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgatttaaca 94
|||| |||| |||||||||||||| ||||||||||| |||||||||||||||||| | |
Sbjct: 55 acagtttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgata 114
Query: 95 atgtggtgctatagtaaacatttgctaatgatggattgattaggcttaataaattcgtct 154
|| ||||| || ||||||| |||||||||||| |||| ||||| ||||| ||||||||||
Sbjct: 115 atatggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtct 174
Query: 155 cgtagtttcttggtggaatctgtaatttgttttgttattagactgcgtttaata 208
| | |||| || ||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 175 cttggtttacaggcggatcctgcaatttgttttgttattagactacgtttaata 228
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 105 bits (53), Expect = 1e-23
Identities = 156/193 (80%), Gaps = 13/193 (6%)
Strand = Plus / Plus
Query: 29 aattacacagattgcgtgtaaattgcgagacgaatcttttaagcctaattgcgccatgat 88
|||||||||||||| ||||||||| ||||| ||||||||||||||||||||| | ||||
Sbjct: 56 aattacacagattgtgtgtaaattacgagatgaatcttttaagcctaattgcttcttgat 115
Query: 89 tt-------------aacaatgtggtgctatagtaaacatttgctaatgatggattgatt 135
|| |||||||||||||| ||||||||| |||||| || ||||| |||
Sbjct: 116 ttgacaatgtggtgctacaatgtggtgctacagtaaacatatgctaacgagggattaatt 175
Query: 136 aggcttaataaattcgtctcgtagtttcttggtggaatctgtaatttgttttgttattag 195
|||||||||||||| |||||| |||| ||||||||||||||||||||| ||| |||
Sbjct: 176 aggcttaataaatttgtctcgcggtttacaagtggaatctgtaatttgttttattactag 235
Query: 196 actgcgtttaata 208
|| ||||||||
Sbjct: 236 tctatgtttaata 248
>42092_osa-MIR445a:mirbase
Length = 268
Score = 103 bits (52), Expect = 5e-23
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 53 gcgagacgaatcttttaagcctaattgcgccatgatttaacaatgtggtgctatagtaaa 112
|||||||||||||||| || |||||| | ||||||||| |||||||| ||||| ||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 113 catttgctaatgatggattgattaggcttaataaattcgtctcg 156
| ||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcg 83
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgcgagacgaatcttttaagcctaatt 78
|||||||||||| ||||||||||||||
Sbjct: 81 tgcgagacgaattttttaagcctaatt 107
>42094_osa-MIR445c:mirbase
Length = 260
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttaagcctaattgcgccatgatt 89
||||||||||||||||||||||||| | ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtctcg 156
|||||||| ||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 138 tagtaaacttttcataattatggattaattaggcttaaaaaattcgtctcg 88
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgcgagacgaatcttttaagcctaatt 78
|||||||||||| ||||||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaatt 112
>42099_osa-MIR445h:mirbase
Length = 277
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtctcg 156
|||||||| ||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 146 tagtaaacttttcataattatggattaattaggcttaaaaaattcgtctcg 96
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgcgagacgaatcttttaagcctaatt 78
|||||||||||| ||||||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaatt 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 53 gcgagacgaatcttttaagcctaattgcgccatgatt 89
|||||||||||||||| || |||||| | ||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattacaccatgatt 146
>42098_osa-MIR445g:mirbase
Length = 275
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtctcg 156
|||||||| ||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 145 tagtaaacttttcataattatggattaattaggcttaaaaaattcgtctcg 95
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgcgagacgaatcttttaagcctaatt 78
|||||||||||| ||||||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaatt 119
>42096_osa-MIR445e:mirbase
Length = 265
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtctcg 156
|||||||| ||| |||| ||||||| ||||||||||| ||||||||||||
Sbjct: 140 tagtaaacttttcataattatggattaattaggcttaaaaaattcgtctcg 90
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 tgcgagacgaatcttttaagcctaatt 78
|||||||||||| ||||||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaatt 114
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 53 gcgagacgaatcttttaagcctaattgcgccatgatt 89
|||||||||||||||| || |||||| | ||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattacaccatgatt 140
>42097_osa-MIR445f:mirbase
Length = 305
Score = 48.1 bits (24), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtc 153
|||||||| ||| |||| ||||||| ||||||||||| |||||||||
Sbjct: 161 tagtaaacttttcataattatggattaattaggcttaaaaaattcgtc 114
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 53 gcgagacgaatcttttaagcctaattgcgccatgatt 89
|||||||||||||||| || |||||| | ||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattacaccatgatt 161
>42093_osa-MIR445b:mirbase
Length = 264
Score = 46.1 bits (23), Expect = 1e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 106 tagtaaacatttgctaatgatggattgattaggcttaataaattcgtctcg 156
|||||||| ||| |||| ||||||| ||||||||||| || |||||||||
Sbjct: 139 tagtaaacttttcataattatggattaattaggcttaaaaagttcgtctcg 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 53 gcgagacgaatcttttaagcctaattgcgccatgatt 89
|||||||||||||||| || |||||| | ||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattacaccatgatt 139
>42095_osa-MIR445d:mirbase
Length = 312
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 95 atgtggtgctatagtaaacatttgctaatgatggattgattaggcttaa 143
||||| ||||| | ||||||| || |||| ||||||| |||||||||||
Sbjct: 145 atgtgatgctacactaaacatgtgttaattatggattaattaggcttaa 193
