miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 85.7 bits (43), Expect = 6e-18
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 15 tactccctctgtcccataatataagagcgttttttacactagtgtagtgtaaaaaacact 74
          ||||||||| |||||||||||||||| | ||||| |||   ||||||||| ||||||| |
Sbjct: 18 tactccctccgtcccataatataagaacatttttgaca---gtgtagtgtcaaaaacatt 74

                                   
Query: 75 cttatattatgggacggagggagta 99
          ||||||||||| |||||||||||||
Sbjct: 75 cttatattatgagacggagggagta 99



 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 76/90 (84%), Gaps = 3/90 (3%)
 Strand = Plus / Minus

                                                                       
Query: 11  gaaatactccctctgtcccataatataagagcgttttttacactagtgtagtgtaaaaaa 70
           ||||||||||||| ||| ||||||||||||  |||||| ||||||    | ||| |||||
Sbjct: 103 gaaatactccctccgtctcataatataagaatgtttttgacactac---actgtcaaaaa 47

                                         
Query: 71  cactcttatattatgggacggagggagtac 100
              |||||||||||||||||||||||||||
Sbjct: 46  tgttcttatattatgggacggagggagtac 17




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 75  cttatattatgggacggagggagtact 101
           |||||||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagtact 129



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 15  tactccctctgtcccataatataag 39
           ||||||||| |||||||||||||||
Sbjct: 127 tactccctccgtcccataatataag 103




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 75  cttatattatgggacggagggagtac 100
           ||||||||||||||||||||||||||
Sbjct: 33  cttatattatgggacggagggagtac 8



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 13 aatactccctctgtcccataatataag 39
          |||||||||||| ||||||||||||||
Sbjct: 96 aatactccctctctcccataatataag 70



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 15 tactccctctgtcccataatataag 39
          ||||||||| |||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 75  cttatattatgggacggagggagtac 100
           ||||||||||||||||||||||||||
Sbjct: 33  cttatattatgggacggagggagtac 8



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 13 aatactccctctgtcccataatataag 39
          |||||||||||| ||||||||||||||
Sbjct: 96 aatactccctctctcccataatataag 70



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 15 tactccctctgtcccataatataag 39
          ||||||||| |||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 75 cttatattatgggacggagggagta 99
          |||||||||||||||||||||||||
Sbjct: 34 cttatattatgggacggagggagta 10



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 75  cttatattatgggacggagggagta 99
           |||||||||||||||||||||||||
Sbjct: 89  cttatattatgggacggagggagta 113



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 14  atactccctctgtcccataatataag 39
           |||||||||| |||||||||||||||
Sbjct: 114 atactccctccgtcccataatataag 89



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 15 tactccctctgtcccataatataag 39
          ||||||||| |||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 75 cttatattatgggacggagggagta 99
          |||||||||||||||||||||||||
Sbjct: 73 cttatattatgggacggagggagta 97



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 14 atactccctctgtcccataatataag 39
          |||||||||| |||||||||||||||
Sbjct: 98 atactccctccgtcccataatataag 73




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 75 cttatattatgggacggagggagta 99
          |||||||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagggagta 7



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 75  cttatattatgggacggagggagta 99
           |||||||||||||||||||||||||
Sbjct: 97  cttatattatgggacggagggagta 121



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 15 tactccctctgtcccataatataag 39
          ||||||||| |||||||||||||||
Sbjct: 7  tactccctccgtcccataatataag 31



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 15  tactccctctgtcccataatataag 39
           ||||||||| |||||||||||||||
Sbjct: 121 tactccctccgtcccataatataag 97




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 75  cttatattatgggacggagggagtact 101
           ||||||| |||||||||||||||||||
Sbjct: 7   cttatatcatgggacggagggagtact 33




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 75  cttatattatgggacggagggagtact 101
           ||||||| |||||||||||||||||||
Sbjct: 10  cttatatcatgggacggagggagtact 36




>50305_osa-miRf11090-akr:pmrd
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 14  atactccctctgtcccataatataag 39
           ||||||||||||||||| ||||||||
Sbjct: 109 atactccctctgtcccaaaatataag 84




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 75  cttatattatgggacggagggagtac 100
           |||||||| |||||||||||||||||
Sbjct: 68  cttatattttgggacggagggagtac 93




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 78 atattatgggacggagggagta 99
          ||||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagta 12



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  attatgggacggagggagta 99
           ||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 73 ctcttatattatgggacggagg 94
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  cttatattatgggacggagg 94
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113