miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 131 bits (66), Expect = 4e-30
Identities = 93/102 (91%)
Strand = Plus / Minus
Query: 38 ctactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagt 97
||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||| |||||
Sbjct: 105 ctactactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagt 46
Query: 98 tgtattaaacttgtgacacttattctgggacggagggagtat 139
|||| ||| |||| |||||||||| |||||||||||||||||
Sbjct: 45 tgtactaagcttgagacacttattttgggacggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 123 bits (62), Expect = 9e-28
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 38 ctactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagt 97
||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||| || ||
Sbjct: 105 ctactactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggt 46
Query: 98 tgtattaaacttgtgacacttattctgggacggagggagtat 139
|||| ||| |||| |||||||||| |||||||||||||||||
Sbjct: 45 tgtactaagcttgagacacttattttgggacggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 113 bits (57), Expect = 8e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
|| |||| |||||||||| || |||||||||||||
Sbjct: 41 ctaggcttgagacacttattttgagacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaa 35
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 112 gacacttattctgggacggagggagta 138
|||||||||| ||||||||||||||||
Sbjct: 75 gacacttattttgggacggagggagta 101
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 107 bits (54), Expect = 5e-23
Identities = 88/98 (89%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||||||||||| ||||||||||| | ||||||||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagtat 139
||| ||| |||||||||| |||||||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaac 73
||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 112 gacacttattctgggacggagggagtatt 140
|||||||||| ||||||||||||||||||
Sbjct: 74 gacacttattttgggacggagggagtatt 102
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||| |||||||| |||||||| ||||||||||||||| || |||||||| ||| |||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
|||| ||| |||||||||| ||| ||||||||||||
Sbjct: 41 ttaagcttaagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| ||||||||||||||||||||||||||| | ||||| ||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
||| |||| |||||||||| ||||||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 gacacttattctgggacggagggagtat 139
|||||||||| |||||||||||||||||
Sbjct: 75 gacacttattttgggacggagggagtat 102
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
||||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||
Sbjct: 104 tactactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagtt 45
Query: 99 gtattaaacttgtgacacttattctgggacggagggagta 138
||| ||| ||| || | ||||| ||||||||||||||||
Sbjct: 44 gtactaagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||| |||||| ||||||||||||||||| ||| ||||| | ||||| |||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgta 64
Query: 102 ttaaacttgtgacacttattctgggacggagggagtat 139
||| ||| |||||||||| |||||||||||||||||
Sbjct: 65 ctaaggttgagacacttattttgggacggagggagtat 102
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaac 73
||||||||||||| ||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
||||||||||||| || ||||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 103 tactactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagtt 45
Query: 99 gtattaaacttgtgacacttattctgggacggagggagtatt 140
||| || |||| |||| ||||| |||||||||| |||||||
Sbjct: 44 gtactaggcttgagacagttattttgggacggagtgagtatt 3
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||| |||||| ||||||||||||||||||||| ||||| | ||||| ||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
|||| ||| |||| ||||| ||||||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| |||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||| |||||||||||| ||||| || ||||||||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
||| ||| |||| ||||| ||||||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 103 taaacttgtgacacttattctgggacggagggagtatt 140
|||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 66 taaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 87.7 bits (44), Expect = 5e-17
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
||||||||||||||||||||||||||| ||||| |||| |||| | ||||||||||||
Sbjct: 104 tactactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagtt 45
Query: 99 gtattaaacttgtgacacttattctgggacggagggagta 138
||| ||| ||| || | ||||| ||||||||||||||||
Sbjct: 44 gtactaagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||| || |||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 38 ctactactccctccgtctcaaaataagtgtct 69
||||||||||||||||| ||||||||||||||
Sbjct: 1 ctactactccctccgtcccaaaataagtgtct 32
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 caactttgtactaaatttagtataaagttg 99
||||||||||||||| |||||| |||||||
Sbjct: 51 caactttgtactaaagttagtacaaagttg 80
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 44 ctccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgtatt 103
||||||||||| ||||||||||||||||||||||||||| |||| || ||||||||| |
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 104 aaacttgtgacacttattctgggacggagggagta 138
| | ||| |||||||||| || || |||| |||||
Sbjct: 67 agagttgagacacttattttgagatggagtgagta 101
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaact 74
||||| |||| ||||||||||||||||||||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaact 69
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||| || ||||||||||||||||||||||||||| | ||||| ||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagtatt 140
||| || |||||||||| ||||||||||||||||||
Sbjct: 41 ctaagctcaagacacttattttgggacggagggagtatt 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtct 69
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||||| ||||||||||||||||| ||||||||| | ||||| |||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 102 ttaaacttgtgacacttattctgggacggagggagtatt 140
||| |||| || | ||||| ||| ||||||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagtatt 103
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 8e-16
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||||||||||||||| ||||||||||||||| || | ||||| |||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 102 ttaaacttgtgacacttattctgggacggaggga 135
||| ||| |||||||||| | |||| ||||||
Sbjct: 41 ctaagcttaagacacttattttaggaccgaggga 8
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagttg 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
||||||||||||| |||| |||||| ||||||||| |||||| ||||||| |||||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||| |||||||||||| ||||| || || |||||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
||| ||| |||| ||||| ||||||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 103 taaacttgtgacacttattctgggacggagggagtatt 140
|||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 66 taaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||| |||||||| |||||||||| ||||||| |||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 66 gtctcaactttgtactaaatttagtataaagttgtattaaacttgtgacacttattctgg 125
||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||| |||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 126 gacggagggag 136
|||| ||||||
Sbjct: 17 gacgaagggag 7
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 104 aaacttgtgacacttattctgggacggagggagtat 139
||||||| |||| ||||| |||||||||||||||||
Sbjct: 115 aaacttgagacagttattttgggacggagggagtat 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 ctccctccgtctcaaaataagtgtctcaac 73
|||||| |||| ||||||||||||||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaac 36
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 caactttgtactaaatttagtataaagttg 99
|||||||| ||||||||||||| |||||||
Sbjct: 44 caactttgcactaaatttagtacaaagttg 73
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 79.8 bits (40), Expect = 1e-14
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||| || |||||||| |||||||||||||||||| | ||||| |||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgta 41
Query: 102 ttaaacttgtgacacttattctgggacggagggagtatta 141
||| ||| |||| ||||| || ||||||||||||||||
Sbjct: 40 -caaagttgagacagttattttgagacggagggagtatta 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtac 80
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
|||||||||||| |||||||||||| ||||||||| |||||||| | ||||| ||| ||
Sbjct: 104 tactactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaatt 45
Query: 99 gtattaaacttgtgacacttattctgggacggagggagta 138
||| ||| || |||||||||| || |||||||||||||
Sbjct: 44 gtactaagattaagacacttattttgagacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtct 69
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtct 32
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtactaaagttagtgcaaagttg 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 76 cacttattttgggacggagggagtat 101
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| |||||||| |||||||||||||||||| | ||||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagtat 139
|| || |||||||||| ||| |||||||||||||
Sbjct: 41 ctacgctcaagacacttattttggaacggagggagtat 4
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 41 ctactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgt 100
||||||||||||| ||||||||| |||||||||||||||||| | ||||| ||||||||
Sbjct: 102 ctactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgt 43
Query: 101 a 101
|
Sbjct: 42 a 42
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 56 caaaataagtgtctcaactttgtactaaatttagtataaagttgtattaaacttgtgaca 115
||||||||||||||||||||||||||| | || || ||||||||| ||| |||| ||||
Sbjct: 87 caaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagaca 28
Query: 116 cttattctgggacggagggagtat 139
||||| || || |||||||||||
Sbjct: 27 gttattttgagatggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
|||||||||| ||||||||||| ||||||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaa 35
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 39 tactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
|||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||||
Sbjct: 2 tactactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagtt 61
Query: 99 gta 101
|||
Sbjct: 62 gta 64
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 4e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||||||| ||||||| ||||| |||||||||||| | ||||||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagtat 139
||| ||| |||||||||| |||||||||||| ||||
Sbjct: 41 ctaagcttaagacacttattttgggacggagggggtat 4
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaa 83
||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtactaa 46
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttag 89
||||| |||| || ||||||||||| |||||||||||||||| |||||
Sbjct: 128 tactcgctccatcccaaaataagtgactcaactttgtactaactttag 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 63.9 bits (32), Expect = 7e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 40 actactccctccgtctcaaaataagtgtct-caactttgtacta 82
||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 3 actactccctccgtcccaaaataagtgtctccaactttgtacta 46
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 112 gacacttattctgggacggagggagta 138
|||||||||| ||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 61.9 bits (31), Expect = 3e-09
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 45 tccctccgtctcaaaataagtgtc-tcaactttgtactaaatttagtataaagttgtatt 103
|||||||||| ||||||||||||| | | || |||| ||| ||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtcattgatttagtac-aaagttagtataaagttgtatt 66
Query: 104 aaacttgtgacacttattctgggacggagggagta 138
||| | |||||||||| |||||||| |||||||
Sbjct: 67 aaatcagcgacacttattttgggacggcgggagta 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaataagtgtc 68
|||||||||| ||||| |||||||||||||
Sbjct: 104 tactactcccgccgtcccaaaataagtgtc 75
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaa 83
||||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtactaa 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 85/101 (84%), Gaps = 4/101 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtg--tctcaactttgtactaaatttagtataaagtt- 98
||||||||||||| ||||||||||| |||||||||| ||||| ||||||| ||| ||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 99 gtattaaacttgtgacacttattctgggacggagggagtat 139
||| ||| ||| | |||||||| ||||||||||||||||
Sbjct: 65 gta-caaagttgagtcacttatttcgggacggagggagtat 104
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||| || |||||||||||| | || |||||| || |||||||||||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 102 ttaaacttgtgacacttattctgggacggagggagtat 139
||| ||| |||||||||| | | ||||| |||||||
Sbjct: 41 ctaagattgagacacttattttagaacggaaggagtat 4
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
|||| ||||||| |||||||| || |||||||||||||||| ||||||| |||||||
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttg 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 caactttgtactaaatttagtataaagttg 99
||||||||||||||| |||||| |||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttg 62
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
|||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 38 ctactactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagt 97
|||||||||||||||| ||||||| || | ||||||| |||||| |||||| |||||
Sbjct: 94 ctactactccctccgttccaaaatagatgacccaactttacactaaagttagtacaaagt 35
Query: 98 tg 99
||
Sbjct: 34 tg 33
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||| ||||||||||||||||| ||||| |||||| || ||| || |||||||| |||||
Sbjct: 102 tacttcctccgtctcaaaataactgtcttaactttatattaatttcagtataaaattgta 43
Query: 102 tt 103
||
Sbjct: 42 tt 41
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 ctccctccgtctcaaaataagtgtctcaacttt 76
||||||||||| |||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 86 ttagtataaagttgtattaaacttgtgacacttattctgggacggagggag 136
|||||| |||||| || |||| ||| |||||||||| ||||||||||||||
Sbjct: 57 ttagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtac 80
|||| |||||||| |||||||||||||||||||| ||||
Sbjct: 89 tacttcctccgtcccaaaataagtgtctcaacttagtac 51
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 58.0 bits (29), Expect = 4e-08
Identities = 81/97 (83%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
|||||||||||||||||||||||| ||| || ||| |||| | ||||| |||||| ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatact-agcttagtgcaaagttata 63
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
||| |||| |||| ||||| || |||||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggagta 100
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
|||||||||||||||||||||| ||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaa 70
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 41 ctactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgt 100
|||||||||||||| |||||||| ||||| |||||||| ||| | ||||||||| || |
Sbjct: 102 ctactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattat 43
Query: 101 attaaacttgtgacacttatt 121
| ||| ||| ||||||||||
Sbjct: 42 actaagcttaagacacttatt 22
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 38 ctactactccctccgtctcaaaataagtgtc 68
||||||||||||||||| |||||||||||||
Sbjct: 1 ctactactccctccgtcccaaaataagtgtc 31
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 103 taaacttgtgacacttattctgggacggagggagta 138
|||| ||| |||||||||| ||||||||||||||||
Sbjct: 40 taaatttgcgacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 gacacttattctgggacggagggagtat 139
|||||||||| |||||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagtat 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtc 68
||||||||||||| |||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 48 ctccgtctcaaaataagtgtctcaactttgtactaaatttag 89
||||||| |||| |||||| |||||||||||||||| |||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtactaactttag 52
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaa 83
||||| ||| ||| ||||||||||| ||||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtactaa 56
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttg 99
|||||||||| | ||||||| || |||||||||||||||| ||||||| |||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 caactttgtactaaatttagtataaagttg 99
||||||||||||||| |||||| |||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttg 62
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgta 79
||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagtt 98
|||||||||||| ||||||| || ||||||||| |||||| |||| |||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttatactaactttaatataaagtt 61
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 103 taaacttgtgacacttattctgggacggagggagtat 139
|||| |||||||||||||| |||||| ||||||||||
Sbjct: 67 taaatttgtgacacttattttgggacagagggagtat 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtc 68
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtatcaaaataagtgtc 31
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaaatttagtataaagttgta 101
||||||||| || |||||||| ||||| |||||||||||| |||| |||||| || ||
Sbjct: 5 tactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttata 64
Query: 102 ttaaacttgtgacacttattctgggacggagggagta 138
||| || |||| ||||| || |||||||||||||
Sbjct: 65 ctaagtttaagacatttattttgcgacggagggagta 101
>RF00906;MIR1122;AC192352.2/55884-55804 3880:Medicago truncatula
(barrel medic)
Length = 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 39 tactactccctccgtctcaaaata 62
||||||||||||||||||||||||
Sbjct: 80 tactactccctccgtctcaaaata 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaata 62
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtctcaaaata 25
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 68 ctcaactttgtactaaatttagtataaagttgtattaaacttgtgacacttattctggga 127
|||||||||||||||| ||||||| |||||| | | ||| | |||||||| |||||
Sbjct: 42 ctcaactttgtactaactttagtacgaagttgagtcacttttgagtcacttattttggga 101
Query: 128 cggagggagtat 139
||||||||||||
Sbjct: 102 cggagggagtat 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| ||||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 52 gtctcaaaataagtgtctcaactttgtactaa 83
||||||||||||||| |||||||||||||||
Sbjct: 15 gtctcaaaataagtgattcaactttgtactaa 46
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagt 65
||||||||||||||||||||||||
Sbjct: 116 tactccctccgtctcaaaataagt 93
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtgt 67
|||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtgt 27
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 113 acacttattctgggacggagggagta 138
||||||||| ||||||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02021561.1/35714-35484 39946:Oryza sativa
Indica Group
Length = 231
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataag 64
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtctcaaaataag 24
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||||||||||| ||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtc 68
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaa 72
||||| ||||||||||||||||||| |||||
Sbjct: 5 tactctctccgtctcaaaataagtgactcaa 35
>RF00906;MIR1122;AAAA02004858.1/41238-41369 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 38 ctactactccctccgtctcaaaa 60
|||||||||||||||||||||||
Sbjct: 1 ctactactccctccgtctcaaaa 23
>RF00906;MIR1122;AACV01002208.1/17153-17286 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 actactccctccgtctcaaaata 62
|||||||||||||||||||||||
Sbjct: 132 actactccctccgtctcaaaata 110
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 actactccctccgtctcaaaata 62
|||||||||||||||||||||||
Sbjct: 134 actactccctccgtctcaaaata 112
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtg 66
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 ctactccctccgtctcaaaataagtg 66
|||||||||||||| |||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtg 66
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtctcaaaataagtg 26
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 ctactccctccgtctcaaaataagtg 66
|||||||||||||| |||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 22 tattctgggacggagggagtat 1
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtg 66
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtg 66
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtctcaaaataagtg 26
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 ctactccctccgtctcaaaataagtg 66
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataagtgtctca 71
|||||||||||| ||||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 gacacttattctgggacggagggagtatta 141
|||||||||| ||| |||||||||||||||
Sbjct: 104 gacacttattttggaacggagggagtatta 133
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataagtgtctcaactttgtactaa 83
|||||||||||| ||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaa 46
>RF00906;MIR1122;AAAA02010839.1/12518-12371 39946:Oryza sativa
Indica Group
Length = 148
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 25 tattctgggacggagggagtat 4
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgtctcaaaataa 63
||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataa 26
>RF00906;MIR1122;AAAA02010965.1/12989-13143 39946:Oryza sativa
Indica Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 131 tattctgggacggagggagtat 152
>RF00906;MIR1122;AP008216.1/17249383-17249263 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 97 tattctgggacggagggagtat 118
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cacttattctgggacggagggagtat 139
|||||||| |||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 41 ctactccctccgtctcaaaata 62
||||||||||||||||||||||
Sbjct: 137 ctactccctccgtctcaaaata 116
>RF00906;MIR1122;AP008216.1/3020906-3020766 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 117 tattctgggacggagggagtat 138
>RF00906;MIR1122;AACV01007748.1/56916-56769 39947:Oryza sativa
Japonica Group
Length = 148
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tattctgggacggagggagtat 139
||||||||||||||||||||||
Sbjct: 124 tattctgggacggagggagtat 145
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgtctcaaaataa 63
||||||||||||||||||||||
Sbjct: 93 tactccctccgtctcaaaataa 72
