miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU626553.1/26077-25985 4572:Triticum urartu
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||||||||||||||||||| |||||||| | ||||| |||||||||
Sbjct: 89 tactccctccgtcccataatataagaacgtttctgacactagtgtagtgccaaaaacgtt 30
Query: 73 cttatatttcgggacagagggagta 97
|||||||| |||||||||||||||
Sbjct: 29 cttatattatgggacagagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
||||||||| || |||||||||||||||||||||| ||||| |||||| | |||||||
Sbjct: 5 tactccctctgtcccataatataagaacgtttttggcactacactagtgtcagaaacgtt 64
Query: 73 cttatatttcgggacagagggagta 97
|||||||| ||||| |||||||||
Sbjct: 65 cttatattatgggacggagggagta 89
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 11 actactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacg 70
|||||||||||||| ||| ||||||||||||||||| ||| || ||| ||| ||||||
Sbjct: 91 actactccctccgtcccaaaatataagaacgtttttaacattagcatattgtcaaaaaca 32
Query: 71 ttcttatatttcgggacagagggagta 97
|||||||||||||||||||||||||||
Sbjct: 31 ttcttatatttcgggacagagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
||||||||| || || |||||||||| |||||||||| || || ||| |||||||||
Sbjct: 5 tactccctctgtcccgaaatataagaatgtttttgacaatatgctaatgttaaaaacgtt 64
Query: 73 cttatatttcgggacagagggagtag 98
||||||||| ||||| ||||||||||
Sbjct: 65 cttatattttgggacggagggagtag 90
>RF00906;MIR1122;AF343492.1/1298-1206 58531:Aegilops speltoides
subsp. speltoides
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgt 71
||||||||||||| ||||||||||| | |||||||||||||| |||||||||||||||
Sbjct: 90 ctactccctccgtcccataatataaaagcgtttttgacactacactagtgtaaaaaacgt 31
Query: 72 tcttatatttcgggacagagggag 95
||||||||| ||||| |||||||
Sbjct: 30 tcttatattatgggacggagggag 7
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 15 ctccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgttct 74
|||||||||| ||||||||||||||||||||| |||||| | |||||| ||||||| | |
Sbjct: 7 ctccctccgtcccataatataagaacgttttttacactagtgtagtgtcaaaaacgcttt 66
Query: 75 tatatttcgggacagagggagtag 98
|||||| ||||| ||||||||||
Sbjct: 67 tatattatgggacggagggagtag 90
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacg 70
|||| ||||||||| ||||||||||||| |||||||||||||| | ||||| |||||||
Sbjct: 3 actattccctccgtcccataatataagagcgtttttgacactagtgcagtgtcaaaaacg 62
Query: 71 ttcttatatttcgggacagagggagta 97
||||||||| ||||| |||||||||
Sbjct: 63 ctcttatattatgggacggagggagta 89
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| |
Sbjct: 89 tactccctccgtcccataatataagagcgtttttgacactgcactagtgtcaaaaacgct 30
Query: 73 cttatatttcgggacagaggga 94
|||||||| ||||| ||||||
Sbjct: 29 cttatattatgggacggaggga 8
>RF00906;MIR1122;AY013246.1/69877-69969 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgt 71
||||||||||||| ||||||||||||| | ||||||||| || | |||||| |||||||
Sbjct: 90 ctactccctccgtcccataatataagagcatttttgacattagtgtagtgtcaaaaacgc 31
Query: 72 tcttatatttcgggacagagggagta 97
||||||||| | |||||||||||||
Sbjct: 30 tcttatattatgagacagagggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
||||||||| || |||||||||||| |||||||||||||| || ||| ||||| | |
Sbjct: 5 tactccctctgtctcataatataagagcgtttttgacactacactaatgtcaaaaatgct 64
Query: 73 cttatatttcgggacagagggagtagct 100
|||||||| ||||| ||||||||||||
Sbjct: 65 cttatattatgggacggagggagtagct 92
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 81.8 bits (41), Expect = 2e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||| ||||||||||| |||| ||||||| | |||||| |||||||||
Sbjct: 88 tactccctccgtcccaaaatataagaacatttt-gacactagtgtagtgtcaaaaacgtt 30
Query: 73 cttatatttcgggacagagggagta 97
||||||||| ||||||||| ||||
Sbjct: 29 cttatatttttggacagaggtagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 30 aatataagaacgtttttgacactaatatagtgtaaaaaacgttcttatatttcgggacag 89
|||||||||||||||||||||||| |||||| |||| |||||||||||| ||||| |
Sbjct: 22 aatataagaacgtttttgacactacactagtgt-caaaatgttcttatattttgggacgg 80
Query: 90 agggagta 97
||||||||
Sbjct: 81 agggagta 88
>RF00906;MIR1122;AM932680.1/104484-104576 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||| | ||||||||||||||||||||| |||||| | ||||| |||||| ||
Sbjct: 89 tactccctccttcccataatataagaacgttttttacactagtgtagtgccaaaaacatt 30
Query: 73 cttatatttcgggacagagggagta 97
|||||||| |||||| ||||||||
Sbjct: 29 cttatattatgggacatagggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||| || |||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 5 tactccctatgtcccataatataagaatgtttttggcactacactagtgtaaaaaacgtt 64
Query: 73 cttatatttcgggacagagggagta 97
|||||||| |||| |||||||||
Sbjct: 65 cttatattatgggaaggagggagta 89
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 79.8 bits (40), Expect = 7e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||||||||||||||||||||| | |||| ||||| | |||||||||
Sbjct: 89 tactccctccgtcccataatataagaacgtttttcaagctaacatagtttgaaaaacgtt 30
Query: 73 cttatatt 80
||||||||
Sbjct: 29 cttatatt 22
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||| | | ||||||||||||||||||||| | |||| ||| | |||||||||
Sbjct: 5 tactcccttcctcccataatataagaacgtttttcaaactatgttagcttgaaaaacgtt 64
Query: 73 cttatatttcgggacagagggagta 97
|||||||| ||||| |||||||||
Sbjct: 65 cttatattatgggacggagggagta 89
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
||||||||| |||||||||||||||| | |||||| |||| | |||||| ||||| |||
Sbjct: 5 tactccctctgttccataatataagagcatttttggcactggtgtagtgtcaaaaatgtt 64
Query: 73 cttatatttcgggacagagggagta 97
|||||||| ||||| |||||||||
Sbjct: 65 cttatattatgggacggagggagta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacacta 53
|||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 89 tactccctccgtcccataatataagaacatttttgacacta 49
>RF00906;MIR1122;AY534123.1/100104-100012 37682:Aegilops tauschii
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| | |||||||||||||| |||| | ||||| | || |||||||||||
Sbjct: 89 tactccctccgtgctataatataagaacgattttcaaactaacaaagcttaaaaaacgtt 30
Query: 73 cttatatttcgggacagaggg 93
|||||||| |||||||||||
Sbjct: 29 cttatattatgggacagaggg 9
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 17 ccctccgttccataatataagaacgttttt 46
||||| || |||||||||||||||||||||
Sbjct: 9 ccctctgtcccataatataagaacgttttt 38
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||||||||||||||| ||||| | ||||| | || | ||||| |||
Sbjct: 89 tactccctccgtcccataatataagaacatttttcaaactaacaaagcttgaaaaaagtt 30
Query: 73 cttatatttcgggacagaggga 94
|||||||| ||||||||||||
Sbjct: 29 cttatattatgggacagaggga 8
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgt 71
||||||||||||||||||||||||||| |||||| |||| | |||||| | ||||||
Sbjct: 4 ctactccctccgttccataatataagagcgttttaaacacaacactagtgttagaaacgt 63
Query: 72 tcttatatttcgggacagagggagta 97
| ||||||| ||||| |||||||||
Sbjct: 64 tgttatattatgggacggagggagta 89
Score = 60.0 bits (30), Expect = 6e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgtt 72
|||||||||||| ||||||||||| ||||||| | |||||| | | |||| |||||| |
Sbjct: 89 tactccctccgtcccataatataacaacgtttctaacactagtgttgtgtttaaaacgct 30
Query: 73 cttatatttcgggacagagggagtag 98
|||||||| || || ||||||||||
Sbjct: 29 cttatattatggaacggagggagtag 4
>RF00906;MIR1122;FJ374604.1/80-162 4573:Aegilops speltoides
Length = 83
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataatataagaacgtttttgacact 52
|||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 3 actactccctccgtcccataatataagagcgtttttgacact 44
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatat 57
|||||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 67 tactccctccgtcccataatataagagcgtttttgacactcatat 23
>RF00906;MIR1122;AK251244.1/665-573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 26 ccataatataagaacgtttttgacactaatatagtgtaaaaaacgttcttatatttcggg 85
||||||| ||||| |||||||||| ||| |||| ||||||||| ||||||||| |||
Sbjct: 18 ccataatgtaagagcgtttttgacgctacactagtataaaaaacgctcttatattatggg 77
Query: 86 acagagggagtag 98
|||||||||||||
Sbjct: 78 acagagggagtag 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataagaacgtttttgacactaatatagtgtaaaaaacgt 71
|||||||||| || ||||||||||||| ||||||| | |||| | ||| || |||||||
Sbjct: 90 ctactccctctgtcccataatataagagcgttttttatactagtgtagcgtcaaaaacgc 31
Query: 72 tctta 76
|||||
Sbjct: 30 tctta 26
>RF00906;MIR1122;X13927.3/11614-11525 4565:Triticum aestivum
(bread wheat)
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 18 cctccgttccataatataagaacgtttttgacacta 53
||||||||||||||||||||| ||||||| ||||||
Sbjct: 9 cctccgttccataatataagagcgttttttacacta 44
>RF00906;MIR1122;DQ537335.1/54883-54975 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaacgtttttgacactaatatagtgt-aaaaaacgt 71
|||||||||||| ||||||| ||||| |||||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtcccataatgtaagacgctttttgacactacactagtgtggaaaaacgt 64
Query: 72 tcttatatttcgggacagagggagtag 98
| ||||||| ||||||||||||||||
Sbjct: 65 t-ttatattatgggacagagggagtag 90
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
|||||||||||||||||||||||||||
Sbjct: 133 ctactccctccgttccataatataaga 107
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataagaac 40
||||||||||||||| |||||||||||||||
Sbjct: 116 tactactccctccgtcccataatataagaac 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagaac 32
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataag 37
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttccataatataag 26
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataag 37
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttccataatataag 26
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 ctccctccgttccataatataag 37
|||||||||||||||||||||||
Sbjct: 240 ctccctccgttccataatataag 218
>RF00906;MIR1122;EF067844.1/466927-467019 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgtttttgacacta 53
||||| |||||| |||||||||| ||||||||||||||||
Sbjct: 89 tactctctccgtctcataatataaaaacgtttttgacacta 49
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa
Indica Group
Length = 158
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataag 37
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccataatataag 29
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataag 37
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccataatataag 29
>RF00906;MIR1122;AACV01018737.1/24214-24370 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 ttactactccctccgttccataatataag 37
|||||||||||||||| ||||||||||||
Sbjct: 1 ttactactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataag 37
||||||||||||||| ||||||||||||
Sbjct: 156 tactactccctccgtcccataatataag 129
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 tactactccctccgttccataatataag 37
||||||||||||||| ||||||||||||
Sbjct: 2 tactactccctccgtcccataatataag 29
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatata 35
||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccataatata 27
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatata 35
||||||||||||||||||||||||
Sbjct: 155 ctactccctccgttccataatata 132
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 130 tactccctccgtcccataatataagaac 103
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 70 gttcttatatttcgggacagagggagtagctt 101
|||||||||||| ||||| |||||||||||||
Sbjct: 104 gttcttatattttgggacggagggagtagctt 135
>RF00906;MIR1122;AAAA02027487.1/4806-4726 39946:Oryza sativa
Indica Group
Length = 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagaac 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 77 tactccctccgtcccataatataagaac 50
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatata 35
||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccataatata 27
>RF00906;MIR1122;AACV01020013.1/4046-4126 39947:Oryza sativa
Japonica Group
Length = 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagaac 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaac 40
|||||||||||| |||||||||||||||
Sbjct: 77 tactccctccgtcccataatataagaac 50
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 9 ttactactccctccgttccataatataagaac 40
|||||||||||||||| ||| |||||||||||
Sbjct: 124 ttactactccctccgtcccaaaatataagaac 93
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 tactactccctccgttccataatataag 37
||||||||||||||| ||||||||||||
Sbjct: 2 tactactccctccgtcccataatataag 29
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 70 gttcttatatttcgggacagagggagta 97
|||||||||||| |||||||||||||||
Sbjct: 32 gttcttatattttgggacagagggagta 5
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
||||||||||||| |||||||||||||
Sbjct: 244 ctactccctccgtcccataatataaga 218
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataatataag 37
|||||||||||||||||| ||||||||
Sbjct: 3 actactccctccgttccaaaatataag 29
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 102
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataaga 38
||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccataatataaga 30
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
||||| |||||||||||||||||||||
Sbjct: 114 ctacttcctccgttccataatataaga 88
>RF00906;MIR1122;AAAA02003711.1/12163-12287 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataatataag 37
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtcccataatataag 29
>RF00906;MIR1122;AACV01018415.1/900-764 39947:Oryza sativa
Japonica Group
Length = 137
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 tcttatatttcgggacagagggagtag 98
|||||||||| ||||||||||||||||
Sbjct: 30 tcttatatttagggacagagggagtag 4
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
||||||||||||| |||||||||||||
Sbjct: 136 ctactccctccgtcccataatataaga 110
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaa 39
|||||||||||| ||||||||||||||
Sbjct: 118 tactccctccgtcccataatataagaa 92
>RF00906;MIR1122;AP008209.1/2115790-2115631 39947:Oryza sativa
Japonica Group
Length = 160
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 ttactactccctccgttccataatata 35
|||||||||||||| ||||||||||||
Sbjct: 160 ttactactccctccattccataatata 134
>RF00906;MIR1122;AAAA02009816.1/6724-6859 39946:Oryza sativa Indica
Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatat 34
|||||||||||||||||||||||
Sbjct: 133 ctactccctccgttccataatat 111
>RF00906;MIR1122;AP008208.1/15568785-15568653 39947:Oryza sativa
Japonica Group
Length = 133
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 70 gttcttatatttcgggacagagggagtagct 100
|||||||||||| |||||||||| |||||||
Sbjct: 102 gttcttatattttgggacagaggaagtagct 132
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
||||||||||||| |||||||||||||
Sbjct: 115 ctactccctccgtcccataatataaga 89
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaa 39
|||||||||||| ||||||||||||||
Sbjct: 143 tactccctccgtcccataatataagaa 117
>RF00906;MIR1122;AL845344.4/40945-41080 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 tcttatatttcgggacagagggagtag 98
|||||||||| ||||||||||||||||
Sbjct: 30 tcttatattttgggacagagggagtag 4
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataatataag 37
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtcccataatataag 29
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
|||||||||||||| ||||||||||||
Sbjct: 138 ctactccctccgtttcataatataaga 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 ttcttatatttcgggacagagggagta 97
||||||||||| |||||||||||||||
Sbjct: 31 ttcttatattttgggacagagggagta 5
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataagaa 39
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagaa 31
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataaga 38
||||||||||||| |||||||||||||
Sbjct: 116 ctactccctccgtcccataatataaga 90
>RF00906;MIR1122;AP004031.3/125858-125981 39947:Oryza sativa
Japonica Group
Length = 124
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataa 36
||||||||||||||| |||||||||||
Sbjct: 123 tactactccctccgtcccataatataa 97
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 238 ctactccctccgtcccataatataag 213
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica
Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 243 ctactccctccgtcccataatataag 218
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 238 tactccctccgtcccataatataaga 213
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 2 tactccctccgtcccataatataaga 27
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 241 ctactccctccgtcccataatataag 216
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 245 ctactccctccgtcccataatataag 220
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 2 tactccctccgtcccataatataaga 27
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 233 ctactccctccgtcccataatataag 208
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa
Indica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF00906;MIR1122;ABXC01000415.1/124553-124445 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 9 ttactactccctccgttccataatataaga 38
|||||||||||||||||||| | |||||||
Sbjct: 109 ttactactccctccgttccaaattataaga 80
>RF00906;MIR1122;AB298184.1/14323-14229 4565:Triticum aestivum
(bread wheat)
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 ttttgacactaatatagtgtaaaaaa 68
||||||||||| ||||||||||||||
Sbjct: 35 ttttgacactagtatagtgtaaaaaa 60
>RF00906;MIR1122;FJ711031.1/1293-1203 4586:Psathyrostachys juncea
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 42 tttttgacactaatatagtgt-aaaaaacgttcttatatttcgggacagagggagtag 98
||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 32 tttttgacactgtcatagtgtcaaaaaacg-tcttatattatgggacagagggagtag 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataagaacgtttttgacacta 53
|||||||||| || ||||||||||||| ||||||||||||
Sbjct: 88 ctactccctctgtcccataatataagacgttttttgacacta 47
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||||||| |||||||||
Sbjct: 163 tactccctccgttccaaaatataaga 138
>RF00906;MIR1122;X80068.1/1038-939 4513:Hordeum vulgare
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||||||| |||||||||
Sbjct: 166 tactccctccgttccaaaatataaga 141
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;EU730901.1/108914-109038 15368:Brachypodium
distachyon
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 actactccctccgttccataat 32
||||||||||||||||||||||
Sbjct: 3 actactccctccgttccataat 24
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 ttactactccctccgttccataatataaga 38
||||||||||||||||| |||| |||||||
Sbjct: 1 ttactactccctccgtttcatattataaga 30
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
||||||||||||| ||||||||||||
Sbjct: 140 tactccctccgtttcataatataaga 115
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 ttactactccctccgttccataatataaga 38
||||||||||||| || |||||||||||||
Sbjct: 1 ttactactccctctgtcccataatataaga 30
>RF00906;MIR1122;AACV01006039.1/12119-12209 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatataaga 30
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 tcttatatttcgggacagagggagta 97
|||||||||| |||||||||||||||
Sbjct: 72 tcttatattttgggacagagggagta 97
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataagaa 39
||||||||||||||| ||| ||||||||||
Sbjct: 130 tactactccctccgtcccaaaatataagaa 101
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 cttatatttcgggacagagggagtag 98
||||||||| ||||||||||||||||
Sbjct: 29 cttatatttagggacagagggagtag 4
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||||||| ||||||||
Sbjct: 159 ctactccctccgttccacaatataag 134
>RF00906;MIR1122;AC105731.2/34053-33963 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 ttactactccctccgttccataatataaga 38
||||||||||||||||| |||| |||||||
Sbjct: 1 ttactactccctccgtttcatattataaga 30
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 153 tactccctccgtcccataatataaga 128
>RF00906;MIR1122;AAAA02017424.1/35532-35675 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||| |||||||||||||||||
Sbjct: 140 tactcccttcgttccataatataaga 115
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa Indica
Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||| |||||||||||||||||||
Sbjct: 131 tactccatccgttccataatataaga 106
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataagaa 39
||||||||||||||| ||| ||||||||||
Sbjct: 130 tactactccctccgtcccaaaatataagaa 101
>RF00906;MIR1122;AAAA02003905.1/26512-26644 39946:Oryza sativa
Indica Group
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tactactccctccgttccataatata 35
||||||||||||||||||| ||||||
Sbjct: 2 tactactccctccgttccaaaatata 27
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataagaacgt 42
|||||||||||| ||| |||||||||||||
Sbjct: 118 tactccctccgtcccaaaatataagaacgt 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 68 acgttcttatatttcgggacagagggagta 97
|||||||||||||| ||||| |||||||||
Sbjct: 89 acgttcttatattttgggacggagggagta 118
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 cttatatttcgggacagagggagtag 98
||||||||| ||||||||||||||||
Sbjct: 29 cttatatttagggacagagggagtag 4
>RF00906;MIR1122;AP002869.1/81681-81526 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatat 34
||||||||||||||||||||||
Sbjct: 5 tactccctccgttccataatat 26
>RF00906;MIR1122;AACV01025355.1/1742-1876 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 cttatatttcgggacagagggagtag 98
||||||||| ||||||||||||||||
Sbjct: 29 cttatatttagggacagagggagtag 4
>RF00906;MIR1122;AC140005.2/42932-42813 39947:Oryza sativa Japonica
Group
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 117 ctactccctccgtcccataatataag 92
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02001357.1/661-786 39946:Oryza sativa Indica
Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatat 34
||||||||||||||||||||||
Sbjct: 5 tactccctccgttccataatat 26
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 136 tactccctccgtcccataatataaga 111
>RF00906;MIR1122;AP008216.1/5042324-5042220 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 102 ctactccctccgtcccataatataag 77
>RF00906;MIR1122;AP008214.1/337131-337286 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatata 35
||||||||||||||| ||||||||||
Sbjct: 155 tactactccctccgtcccataatata 130
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
||||||||||||| ||||||||||||
Sbjct: 158 tactccctccgtttcataatataaga 133
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa
Japonica Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 tcttatatttcgggacagagggagta 97
|||||||||| |||||||||||||||
Sbjct: 72 tcttatattttgggacagagggagta 97
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 actactccctccgttccataatataagaac 40
|||||||||||||| ||| |||||||||||
Sbjct: 121 actactccctccgtcccaaaatataagaac 92
>RF00906;MIR1122;AP008214.1/27846174-27846285 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 cttatatttcgggacagagggagtag 98
||||||||| ||||||||||||||||
Sbjct: 29 cttatattttgggacagagggagtag 4
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgttccataatataaga 38
|||||||||||| |||||||||||||
Sbjct: 153 tactccctccgtcccataatataaga 128
>RF00906;MIR1122;AP003940.3/16183-16061 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 ctactccctccgttccataatataag 37
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tactactccctccgttccataatataagaa 39
||||||||||||||| ||| ||||||||||
Sbjct: 156 tactactccctccgtcccaaaatataagaa 127
>RF00906;MIR1122;AP002485.2/92019-92165 39947:Oryza sativa
Japonica Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tactactccctccgttccataatata 35
||||||||||||||| ||||||||||
Sbjct: 2 tactactccctccgtcccataatata 27
