miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 8 gtactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgc 67
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 8 gtactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgc 67
Query: 68 tcttatattcctttacggagggag 91
||||||||| ||||||||||||||
Sbjct: 68 tcttatatttctttacggagggag 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 8 gtactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgc 67
|||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |
Sbjct: 94 gtactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacac 35
Query: 68 tcttatattcctttacggagggag 91
||| ||||| |||||| |||||||
Sbjct: 34 tctaatatttctttacagagggag 11
>48304_ave-miR1120:pmrd
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 74/84 (88%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 8 gtactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgc 67
|||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 3 gtactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgc 56
Query: 68 tcttatattcctttacggagggag 91
||||||||| |||||| |||||||
Sbjct: 57 tcttatatttctttacagagggag 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 73/83 (87%), Gaps = 6/83 (7%)
Strand = Plus / Minus
Query: 9 tactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgct 68
||||||||||||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct: 82 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 29
Query: 69 cttatattcctttacggagggag 91
|||||||| |||||| |||||||
Sbjct: 28 cttatatttctttacagagggag 6
>54753_tae-miR2033b:pmrd
Length = 72
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 9 tactccctctgtaaagaaatataagagtgtttagatcactata 51
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcactata 30
>54756_tmo-miR1120:pmrd
Length = 85
Score = 71.9 bits (36), Expect = 8e-14
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 12 tccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgctctt 71
|||||||||||| ||||||||| |||||||||||| |||||||||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 72 atattcctttacggagggag 91
||||| ||||| |||||||
Sbjct: 64 atattagtttacagagggag 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 9 tactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgct 68
||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 69 cttatattcctttacggaggga 90
|||||||| ||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54761_tur-miR1120:pmrd
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgctctt 71
|||||||||||| ||||||||| |||||||||||| |||||||||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcacta-agtagtgatctaaaaggtctt 62
Query: 72 atattcctttacggagggag 91
||||| ||||| |||||||
Sbjct: 63 atattagtttacagagggag 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 9 tactccctctgtaaagaaatataagagtgtttagatcactatagtagtgatctaaatgct 68
||||||||||||||| ||||||||| |||||||||||| |||||||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcacta-cttagtgatctaaaaggt 26
Query: 69 cttatattcctttacggaggga 90
|||||||| ||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54752_tae-miR2033a:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tactccctctgtaaagaaatat 30
||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaagaaatat 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 ctctgtaaagaaatataaga 34
||||||||||||||||||||
Sbjct: 60 ctctgtaaagaaatataaga 41
