miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 105 bits (53), Expect = 6e-24
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
||||| |||||||||||||||||| ||||||||||||||| ||||||||| || |||| |
Sbjct: 89 ccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacactctaa 30
Query: 73 tatttctttacggagagagtacata 97
||||||||||| ||| |||||||||
Sbjct: 29 tatttctttacagagggagtacata 5
Score = 91.7 bits (46), Expect = 9e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
|||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||
Sbjct: 13 ccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgctctta 72
Query: 73 tatttctttacggagagagtac 94
||||||||||||||| ||||||
Sbjct: 73 tatttctttacggagggagtac 94
>48304_ave-miR1120:pmrd
Length = 85
Score = 91.7 bits (46), Expect = 9e-20
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Minus
Query: 6 atatacaccctctgtaaagaaatataagagcatttagatcactactttagtgatctacac 65
|||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||
Sbjct: 85 atatactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaac 32
Query: 66 gctcttatatttctttacggagagagtac 94
|||||||||||||||||| ||| ||||||
Sbjct: 31 gctcttatatttctttacagagggagtac 3
Score = 83.8 bits (42), Expect = 2e-17
Identities = 71/81 (87%), Gaps = 6/81 (7%)
Strand = Plus / Plus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
|||||||||||||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 8 ccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgctctta 61
Query: 73 tatttctttacggagagagta 93
||||||||||| ||| |||||
Sbjct: 62 tatttctttacagagggagta 82
>54756_tmo-miR1120:pmrd
Length = 85
Score = 71.9 bits (36), Expect = 8e-14
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
||||||||||| ||||||||| | ||||||||||||||||||||||||| | | |||||
Sbjct: 81 ccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtctta 22
Query: 73 tatt 76
||||
Sbjct: 21 tatt 18
Score = 50.1 bits (25), Expect = 3e-07
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
||||||||||| ||||||||| | |||||||||||| |||||||||| | | |||||
Sbjct: 5 ccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctta 64
Query: 73 tatttctttacggagagagta 93
|||| ||||| ||| |||||
Sbjct: 65 tattagtttacagagggagta 85
>54761_tur-miR1120:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 5e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 13 ccctctgtaaagaaatataagagcatttagatcactactttagtgatctacacgctctta 72
||||||||||| ||||||||| | ||||||||||||| ||||||||||| | | |||||
Sbjct: 80 ccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaaggtctta 22
Query: 73 tatt 76
||||
Sbjct: 21 tatt 18
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 13 ccctctgtaaagaaatataagagcatttagatcacta 49
||||||||||| ||||||||| | ||||||||||||
Sbjct: 5 ccctctgtaaactaatataagaccttttagatcacta 41
>54753_tae-miR2033b:pmrd
Length = 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 16 tctgtaaagaaatataagagcatttagatcacta 49
|||||||||||||||||||| ||||||||||||
Sbjct: 65 tctgtaaagaaatataagagtgtttagatcacta 32
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tagtgatctacacgctcttatatttctttac 83
|||||||||| || |||||||||||||||||
Sbjct: 32 tagtgatctaaacactcttatatttctttac 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 64 acgctcttatatttctttacggagagagta 93
||||||||||||||||||| |||| |||||
Sbjct: 30 acgctcttatatttctttatggagggagta 1
>54752_tae-miR2033a:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 ctctgtaaagaaatataaga 34
||||||||||||||||||||
Sbjct: 60 ctctgtaaagaaatataaga 41
