miRNEST 2.0, an integrative microRNA resource :: BLAST
>45545_miR162:micropc
Length = 91
Score = 119 bits (60), Expect = 6e-28
Identities = 84/91 (92%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaa--a 87
||||||||||||||||||||||||||||||| ||| |||||||||| | |||||||| |
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
Query: 88 catgaatcggtcgataaacctctgcatccag 118
||||||||| |||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
>46511_miR162:micropc
Length = 89
Score = 115 bits (58), Expect = 9e-27
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaa--ac 88
|||||||||||||||||||||||||||||| ||| |||||||||| | |||||||| ||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
Query: 89 atgaatcggtcgataaacctctgcatcca 117
|||||||| ||||||||||||||||||||
Sbjct: 61 atgaatcgatcgataaacctctgcatcca 89
>46039_miR162:micropc
Length = 92
Score = 97.6 bits (49), Expect = 2e-21
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgg-gaaatttgttgtgacactaacacaa-- 86
|||||||||||||||||||||||||||||||| | | |||||||||| | || |||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaac 60
Query: 87 acatgaatcggtcgataaacctctgcatccag 118
|||||||||| |||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatccag 92
>46504_miR162:micropc
Length = 90
Score = 93.7 bits (47), Expect = 3e-20
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgg-gaaatttgttgtgacactaacacaa--a 87
||||||||||||||||||||||||||||||| | | |||||||||| | || ||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaaca 60
Query: 88 catgaatcggtcgataaacctctgcatcca 117
||||||||| ||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
>46026_miR162:micropc
Length = 87
Score = 77.8 bits (39), Expect = 2e-15
Identities = 80/90 (88%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacacaaac 88
||||| |||||||||||||||||| |||||| || |||||| || | | ||| ||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaacaaac 57
Query: 89 atgaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||||
Sbjct: 58 atgaatcggtcgataaacctctgcatccag 87
>46557_miR162:micropc
Length = 85
Score = 73.8 bits (37), Expect = 3e-14
Identities = 78/88 (88%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacacaaaca 89
|||| |||||||||||||||||| |||||| || |||||| || | | ||| |||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaacaaaca 57
Query: 90 tgaatcggtcgataaacctctgcatcca 117
||||||||||||||||||||||||||||
Sbjct: 58 tgaatcggtcgataaacctctgcatcca 85
>46817_miR162:micropc
Length = 93
Score = 69.9 bits (35), Expect = 5e-13
Identities = 80/93 (86%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtg-acactaacacaa-- 86
||||||||||||||||||||||| ||| || || ||||||||| | | ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 60
Query: 87 -acatgaatcggtcgataaacctctgcatccag 118
|||||||||| |||||||||||||||||||||
Sbjct: 61 tacatgaatcgatcgataaacctctgcatccag 93
>46096_miR162:micropc
Length = 87
Score = 69.9 bits (35), Expect = 5e-13
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaaa-c 88
|||||||||||||||||||||||||||||| ||| || | |||| | |||||||| |
Sbjct: 1 ctggaggcagcggttcatcgatctcttcct--gaatttggctgtg-gaagaacacaaagc 57
Query: 89 atgaatcggtcgataaacctctgcatccag 118
| ||||||||||||||||||||||||||||
Sbjct: 58 aagaatcggtcgataaacctctgcatccag 87
>46597_miR162:micropc
Length = 91
Score = 65.9 bits (33), Expect = 8e-12
Identities = 78/91 (85%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtg-acactaacacaa--- 86
|||||||||||||||||||||| ||| || || ||||||||| | | ||||||||
Sbjct: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
Query: 87 acatgaatcggtcgataaacctctgcatcca 117
|||||||||| ||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatcca 91
>44920_miR162:micropc
Length = 85
Score = 65.9 bits (33), Expect = 8e-12
Identities = 77/88 (87%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaaa-ca 89
||||||||||||||||||||||||||||| ||| || | |||| | |||||||| ||
Sbjct: 1 tggaggcagcggttcatcgatctcttcct--gaatttggctgtg-gaagaacacaaagca 57
Query: 90 tgaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 58 agaatcggtcgataaacctctgcatcca 85
>46549_miR162:micropc
Length = 92
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgg 61
||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgg 32
>46456_miR162:micropc
Length = 89
Score = 63.9 bits (32), Expect = 3e-11
Identities = 76/89 (85%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 32 ggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacactaacacaaaca 89
|||||||||||||||||||||||||||||| ||||| ||| | ||| || |||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaa---aaaca 60
Query: 90 tgaatcggtcgataaacctctgcatccag 118
|||| || |||||||||||||||||||||
Sbjct: 61 tgaaccgatcgataaacctctgcatccag 89
>45921_miR162:micropc
Length = 110
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctg 60
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 90 tcgataaacctctgcatccag 110
>45903_miR162:micropc
Length = 90
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgg 61
|||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgg 31
>45617_miR162:micropc
Length = 88
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatccag 118
|||||||||||||||||||||||||||||||
Sbjct: 58 catgaatcggtcgataaacctctgcatccag 88
>45283_miR162:micropc
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 75/88 (85%), Gaps = 5/88 (5%)
Strand = Plus / Plus
Query: 32 ggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacactaacacaaaca 89
|||||||||||||||||||||||||||||| ||||| ||| | ||| || |||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaa---aaaca 59
Query: 90 tgaatcggtcgataaacctctgcatcca 117
|||| || ||||||||||||||||||||
Sbjct: 60 tgaaccgatcgataaacctctgcatcca 87
>44984_miR162:micropc
Length = 85
Score = 61.9 bits (31), Expect = 1e-10
Identities = 76/89 (85%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaaaca 89
||||| ||||||||||||||||||||||||| || ||||||||| | | || | ||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctg---aaattgttgtgaaaaaagcagat-ca 56
Query: 90 tgaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 57 agaatcggtcgataaacctctgcatccag 85
>45757_miR162:micropc
Length = 86
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatcca 117
||||||||||||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatcca 86
>45508_miR162:micropc
Length = 108
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctg 60
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatcca 117
||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatcca 108
>46792_miR162:micropc
Length = 83
Score = 58.0 bits (29), Expect = 2e-09
Identities = 74/87 (85%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaaacat 90
|||| ||||||||||||||||||||||||| || ||||||||| | | || | ||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctg---aaattgttgtgaaaaaagcagat-caa 56
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 57 gaatcggtcgataaacctctgcatcca 83
>46628_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcc 58
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46169_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcc 58
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>45084_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcc 58
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44890_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcc 58
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44807_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcc 58
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46676_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatccag 118
||||||||| |||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaa 65
||||||||||||||||||||||| |||||| ||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtgaaa 36
>46470_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcc 58
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45868_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcc 58
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45605_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcc 58
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45416_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcc 58
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45197_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcc 58
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>44934_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatccag 118
||||||||| |||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaa 65
||||||||||||||||||||||| |||||| ||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtgaaa 36
>46394_miR162:micropc
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatcca 117
||||||||| ||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaa 65
|||||||||||||||||||||| |||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaaa 35
>46364_miR162:micropc
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatcca 117
||||||||| ||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaa 65
|||||||||||||||||||||| |||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaaa 35
>45991_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 81 gaatcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 84 gaatcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>46457_miR162:micropc
Length = 109
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||| ||||||||||||||||||||
Sbjct: 83 gaatcgatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||| ||||||||||||||||||||
Sbjct: 71 gaatcgatcgataaacctctgcatcca 97
>44845_miR162:micropc
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||| ||||||||||||||||||||
Sbjct: 80 gaatcgatcgataaacctctgcatcca 106
>45279_miR162:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| ||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
