miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 131 bits (66), Expect = 2e-31
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 20 gggtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac 79
|||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 13 gggtaaagacactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa 72
Query: 80 taacacaa--acatgaatcggtcgataaacctctgcatccagcgc 122
|||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 73 taacacaaatacatgaatcgatcgataaacctctgcatccagcgc 117
>41090_tcc-MIR162:mirbase
Length = 131
Score = 123 bits (62), Expect = 4e-29
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaacacaa- 87
||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaa 78
Query: 88 -acatgaatcggtcgataaacctctgcatccag 119
|||||| ||| |||||||||||||||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 111 bits (56), Expect = 1e-25
Identities = 95/104 (91%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 19 agggtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgaca 78
||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 1 agggtaaagtcactggaggcagcggttcatcgatctcttcctggg-aatttggtgtga-a 58
Query: 79 ctaacaca-aacatgaatcggtcgataaacctctgcatccagcg 121
| |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 59 aaatcacagaacatgaatcgatcgataaacctctgcatccagcg 102
>41220_csi-MIR162:mirbase
Length = 201
Score = 103 bits (52), Expect = 4e-23
Identities = 97/110 (88%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtg-acact 80
|||||||||||||||||||||||||||||||| ||| || || ||||||||| | | |
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaat 139
Query: 81 aacacaa---acatgaatcggtcgataaacctctgcatccagcgctcact 127
||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 140 aacacaaaatacatgaatcgatcgataaacctctgcatccagcgctcact 189
>40663_mtr-MIR162:mirbase
Length = 124
Score = 101 bits (51), Expect = 1e-22
Identities = 92/102 (90%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 27 gtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacac 85
||||||||| |||||||||||||||||| |||||| || |||||| || | | ||| ||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaac 73
Query: 86 aaacatgaatcggtcgataaacctctgcatccagcgctcact 127
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatccagcgctcact 115
>40342_rco-MIR162:mirbase
Length = 101
Score = 99.6 bits (50), Expect = 6e-22
Identities = 89/100 (89%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 28 tcactggaggcagcggttcatcgatctcttcctggga-aatttgttgtgacactaacaca 86
||||||||||||||||||||||||||||||||||| | | |||||||||| || || | |
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaata 60
Query: 87 aa---catgaatcggtcgataaacctctgcatccagcgct 123
|| ||||||||| |||||||||||||||||||||||||
Sbjct: 61 aaacgcatgaatcgatcgataaacctctgcatccagcgct 100
>41578_vvi-MIR162:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaa 82
||||||||||||| ||||||||||||||||||||||||| || ||||||||| | |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctg---aaattgttgtgaaaaaag 57
Query: 83 cacaaacatgaatcggtcgataaacctctgcatccagcgctcact 127
|| | || |||||||||||||||||||||||||||||| |||||
Sbjct: 58 ca-gatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 81.8 bits (41), Expect = 1e-16
Identities = 88/102 (86%), Gaps = 5/102 (4%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacacta 81
|||| |||||||||||||||||||||||||||||||||| ||||| ||| | ||| |
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
Query: 82 acacaaacatgaatcggtcgataaacctctgcatccagcgct 123
| ||||||||| || |||||||||||||||||||||||||
Sbjct: 64 a---aaacatgaaccgatcgataaacctctgcatccagcgct 102
>40437_gma-MIR162:mirbase
Length = 102
Score = 81.8 bits (41), Expect = 1e-16
Identities = 91/106 (85%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacacta 81
|||||||||||||| ||||||||||||||||||||||||| | | ||||| || |
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctg----aatcgttgtttaac-a 55
Query: 82 acacaaacatgaatcggtcgataaacctctgcatccagcgctcact 127
|| || ||||||||| |||||||||||||||||||||||||||||
Sbjct: 56 tcagaaccatgaatcgatcgataaacctctgcatccagcgctcact 101
>39812_aly-MIR162a:mirbase
Length = 228
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctgggaa 65
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctgggaa 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 89 catgaatcggtcgataaacctctgcatccagcg 121
||||||| | |||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
>39813_aly-MIR162b:mirbase
Length = 184
Score = 67.9 bits (34), Expect = 2e-12
Identities = 85/102 (83%), Gaps = 5/102 (4%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacacta 81
|||||||| ||||||||||||||||||||||| |||||| ||| || |||| |
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatcaattcctgtgaatatttttgt-----tt 95
Query: 82 acacaaacatgaatcggtcgataaacctctgcatccagcgct 123
|| || ||||||||| |||||||||||||||||||||||||
Sbjct: 96 tcaaaagcatgaatcgatcgataaacctctgcatccagcgct 137
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 89 catgaatcggtcgataaacctctgcatccagcg 121
||||||| | |||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctg 41
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctg 41
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatc 53
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccagcgct 123
|||||| |||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatcc 117
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 92 gaatcggtcgataaacctctgcatccag 119
|||||| ||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
