miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 135 bits (68), Expect = 1e-31
Identities = 90/96 (93%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgt 43
Query: 66 actaaagttgagacacttatttt-ggacggagggag 100
||||| |||||||||||||||| ||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggag 7
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 133 bits (67), Expect = 5e-31
Identities = 89/95 (93%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgta 42
Query: 67 ctaaagttgagacacttattttg-gacggagggag 100
||| ||||||||||||||||| |||||||||||
Sbjct: 41 ctaggcttgagacacttattttgagacggagggag 7
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaa 35
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 129 bits (65), Expect = 8e-30
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 9 ctccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgtact 68
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 69 aaagttgagacacttattttg 89
| |||||||||||||||||||
Sbjct: 67 agagttgagacacttattttg 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 69 aaagttgagacacttatttt-ggacggagggagc 101
|||||||||||||||||||| |||||||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagggagc 6
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 127 bits (64), Expect = 3e-29
Identities = 89/96 (92%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgt 43
Query: 66 actaaagttgagacacttatttt-ggacggagggag 100
||||| |||||||||||||||| ||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggag 7
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 87/95 (91%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||| ||||||| |||||||||||||||| ||| ||||||| |||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgta 64
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| ||||||||||||||||| ||||||||||||
Sbjct: 65 ctaaggttgagacacttattttgggacggagggag 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaac 38
|||||||||||||| |||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 117 bits (59), Expect = 3e-26
Identities = 88/95 (92%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| ||||||||||||||||| ||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggag 7
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaac 38
|||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 67 ctaaagttgaga 78
|||| |||||||
Sbjct: 89 ctaaggttgaga 78
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 31 gtctcaactttgtactaactttagtacaaagttgtactaaagttgagacacttattttgg 90
|||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 ctccctccgtcctaaaataagtgtctcaac 38
|||||| ||||| |||||||||||||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaac 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 35 caactttgtactaactttagtacaaagttg 64
|||||||| ||||| |||||||||||||||
Sbjct: 44 caactttgcactaaatttagtacaaagttg 73
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 111 bits (56), Expect = 2e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 67 ctaa 70
||||
Sbjct: 48 ctaa 45
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtgtct 34
||||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtct 32
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 35 caactttgtactaactttagtacaaagttg 64
|||||||||||||| ||||||||||||||
Sbjct: 51 caactttgtactaaagttagtacaaagttg 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 aaagttgagacacttattttgg 90
||||||||||||||||||||||
Sbjct: 74 aaagttgagacacttattttgg 95
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 109 bits (55), Expect = 7e-24
Identities = 87/95 (91%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||| ||| ||||||| |||||||||||||||||| || |||||||||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgta 41
Query: 67 ctaaagttgagacacttattttg-gacggagggag 100
| |||||||||||| |||||||| |||||||||||
Sbjct: 40 c-aaagttgagacagttattttgagacggagggag 7
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtac 45
||||||||||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 109 bits (55), Expect = 7e-24
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| |||||||||||||||||||||||||| || ||||||||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| |||||||||||||||| ||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggag 7
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 50.1 bits (25), Expect = 6e-06
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 69 aaagttgagacacttatttt-ggacggagggag 100
|||||||||||||||||||| ||||||||||||
Sbjct: 67 aaagttgagacacttattttgggacggagggag 99
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 85/95 (89%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||| | |||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 67 ctaaagttgagacacttattttgg-acggagggag 100
|||| |||||| | ||||||||| ||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggag 99
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 93.7 bits (47), Expect = 4e-19
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||| ||| |||||||||||||||||||||||||| || ||||||||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttta 42
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| | ||||||||||||| ||||||||||||
Sbjct: 41 ctaagctcaagacacttattttgggacggagggag 7
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtct 34
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 aaagttgagacacttattttgg 90
||||||||||||||||||||||
Sbjct: 67 aaagttgagacacttattttgg 88
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 4e-19
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||| ||||||| |||||||||||||||||||| ||||| || ||||||||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
||| |||||||| ||||||| ||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggag 99
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 68 taaagttgagacacttattttgg 90
|||||||||||||||||||||||
Sbjct: 40 taaagttgagacacttattttgg 18
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| ||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 4e-19
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||| |||||||||||||||||| || ||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgta 42
Query: 67 ctaaagttgagacacttattttgg-acggagggag 100
||| | ||||||||||||||| ||||||||||
Sbjct: 41 ctacgctcaagacacttattttggaacggagggag 7
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
||||||||||||| ||||||| ||||||||||||||| || || |||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 67 ctaaagttgagacacttatttt 88
|||| || |||||||||||||
Sbjct: 41 ctaagcttaagacacttatttt 20
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 89.7 bits (45), Expect = 7e-18
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 101 ctactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgt 43
Query: 66 actaaagttgagacacttattttgg 90
|||| |||||||| |||||||||
Sbjct: 42 actaggcttgagacagttattttgg 18
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 69 aaagttgagacacttattttggacggagggag 100
|||||||||||||||||||||| ||||||||
Sbjct: 67 aaagttgagacacttattttgggaggagggag 98
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 22 aaaataagtgtctcaactttgtactaactttagtacaaagttgtactaaagttgagacac 81
|||||||||||||||||||||||||| || || |||||||||||||||| ||||||||
Sbjct: 86 aaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagacag 27
Query: 82 ttattttg 89
||||||||
Sbjct: 26 ttattttg 19
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 aaagttgagacacttattttgga 91
|||||||||||||||||||||||
Sbjct: 67 aaagttgagacacttattttgga 89
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 84/96 (87%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
|||||||||| ||| ||||||| ||||||||| |||||||| || ||||||||| ||||
Sbjct: 102 ctactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgt 43
Query: 66 actaaagttgagacacttattttg-gacggagggag 100
||||| || |||||||||||||| |||||||||||
Sbjct: 42 actaagattaagacacttattttgagacggagggag 7
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||| ||||||||| ||||||| ||||||||||||||| || ||||||||||| |||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgta 42
Query: 67 ctaaagttgagacacttattttgg-acggagggag 100
||| || ||||||||||||||| ||||||||||
Sbjct: 41 ttaagcttaagacacttattttggaacggagggag 7
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 atgctactccctccgtcctaaaataagtgtct 34
|||||||||||||||| | |||||||||||||
Sbjct: 1 atgctactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 83.8 bits (42), Expect = 4e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
|||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
Score = 67.9 bits (34), Expect = 2e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
||||||||| |||| |||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagttg 62
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||
Sbjct: 102 ctactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgt 43
Query: 66 actaa 70
|||||
Sbjct: 42 actaa 38
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 79.8 bits (40), Expect = 7e-15
Identities = 50/52 (96%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 51 ttagtacaaagttgtactaaagttgagacacttatttt-ggacggagggagc 101
||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 57 ttagtacaaagttatactaaagttgagacacttattttgggacggagggagc 6
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 ctccctccgtcctaaaataagtgtctcaacttt 41
|||||||||||| ||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 47 aactttagtacaaagttgtactaaagttgagacacttattttgg 90
|||||||||| || ||||||||| |||||||||||||||||||
Sbjct: 34 aactttagtataactttgtactaa-gttgagacacttattttgg 76
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
|||||||||||||| ||||||||| |||||||||| |||| || ||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgt 43
Query: 66 actaaagttgagacacttatttt-ggacggagggag 100
||||| |||||| | ||||||| ||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggag 7
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 68 taaagttgagacacttattttg-gacggagggag 100
||||||||||| |||||||||| |||||||||||
Sbjct: 66 taaagttgagatacttattttgagacggagggag 99
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||| ||| ||||||||||| | || |||||| || |||||||| |||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 67 ctaaagttgagacacttatttt 88
|||| ||||||||||||||||
Sbjct: 41 ctaagattgagacacttatttt 20
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||| ||||| ||||||||||||||||||
Sbjct: 5 tactccttccgttctaaaataagtgtctcaa 35
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
|||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtactaaagttagtgcaaagttg 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 33 ctcaactttgtactaactttagtacaaagttg 64
|||||||||| |||||||||||||||||||||
Sbjct: 41 ctcaactttgcactaactttagtacaaagttg 72
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaacttt 52
|||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtactaacttt 50
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttag 54
||||| |||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 128 tactcgctccatcccaaaataagtgactcaactttgtactaactttag 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 47/51 (92%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 52 tagtacaaagtt-gtactaaagttgagacacttatttt-ggacggagggag 100
|||||||||||| |||| ||||||||| |||||||||| ||||||||||||
Sbjct: 56 tagtacaaagttagtac-aaagttgagtcacttattttgggacggagggag 7
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 73.8 bits (37), Expect = 4e-13
Identities = 85/97 (87%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagtt-g 64
||||||||||||| |||||||| || |||||||||||||||||| ||||||||| || |
Sbjct: 102 ctactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattag 43
Query: 65 tactaaagttgagacacttattttgg-acggagggag 100
||| ||||||||| || |||||||| ||||||||||
Sbjct: 42 tac-aaagttgagtcatctattttggaacggagggag 7
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaa 48
|||||||||||| | |||||| || ||||||||||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaa 46
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
|||||||||||||| ||||||||| ||||| |||| |||| || ||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgt 43
Query: 66 actaaagttgagacacttatttt-ggacggagggag 100
||||| |||||| | ||||||| ||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggag 7
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 69.9 bits (35), Expect = 6e-12
Identities = 86/98 (87%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtg--tctcaactttgtactaactttagtacaaagtt- 63
|||||||||||||| |||||||||| |||||||||| ||||| ||||||||||| ||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 64 gtactaaagttgagacacttattt-tggacggagggag 100
|||| ||||||||| ||||||||| ||||||||||||
Sbjct: 65 gtac-aaagttgagtcacttatttcgggacggagggag 101
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaa 48
|||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtactaa 62
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
||||||||||||||| ||||||| ||||| |||||||| ||| || ||||| ||| || |
Sbjct: 102 ctactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattat 43
Query: 66 actaaagttgagacacttatttt 88
||||| || |||||||||||||
Sbjct: 42 actaagcttaagacacttatttt 20
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 69.9 bits (35), Expect = 6e-12
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||| |||||||||||| ||||| | ||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| || ||||| ||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggag 7
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 68 taaagttgagacacttatttt-ggacggagggag 100
||||||||||||| ||||||| ||||||||||||
Sbjct: 66 taaagttgagacagttattttgggacggagggag 99
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 67.9 bits (34), Expect = 2e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
|||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 90 tactccctccgttctaaaatagacgactcaactttgtactatctttagtacaaagttg 33
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 67.9 bits (34), Expect = 2e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
|||||||||| | | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 35 caactttgtactaactttagtacaaagttg 64
|||||||||||||| ||||||||||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttg 62
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgt 65
|||||||||||||| |||||| ||||||||||||| ||| || ||||| ||||||||
Sbjct: 4 ctactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgt 63
Query: 66 actaaagttgagacacttattttgg 90
||||| |||||| | |||||||||
Sbjct: 64 actaagtttgagaaagttattttgg 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 68 taaagttgagacacttattttg-gacggagggag 100
|||||||||||||| ||||||| |||||||||||
Sbjct: 40 taaagttgagacacctattttgagacggagggag 7
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 79/93 (84%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| |||||| ||||| |||||||||||| || ||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 67 ctaaagttgagacacttatttt-ggacggaggg 98
|||| || ||||||||||||| ||||||||||
Sbjct: 41 ctaagcttaagacacttattttgggacggaggg 9
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 33 ctcaactttgtactaactttagtacaaagttg 64
||||||||||||||||||||||||||||||||
Sbjct: 64 ctcaactttgtactaactttagtacaaagttg 33
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 35 caactttgtactaactttagtacaaagttg 64
|||||||||||||| ||||||||||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttg 62
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
||||||||||||| ||||||||| ||| || ||| ||||| | ||||| ||||||| ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatactagc-ttagtgcaaagttata 63
Query: 67 ctaaagttgagacacttattttg-gacggagggag 100
|||| |||||||| |||||||| |||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggag 98
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 80/95 (84%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
||||||||| || | ||||||| ||||| |||||||||||| ||||| || ||| || ||
Sbjct: 5 tactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttata 64
Query: 67 ctaaagttgagacacttattttg-gacggagggag 100
|||| || ||||| |||||||| |||||||||||
Sbjct: 65 ctaagtttaagacatttattttgcgacggagggag 99
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 80/95 (84%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttgta 66
|||||||||||||| ||||||| |||||||||||| ||||| | || || ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 67 ctaaagttgagacacttatttt-ggacggagggag 100
|||| || ||||| ||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggag 7
Score = 44.1 bits (22), Expect = 4e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 68 taaagttgagacacttatttt-ggacggagggag 100
||||||||||||| ||||||| ||||||||||||
Sbjct: 66 taaagttgagacagttattttgggacggagggag 99
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 61.9 bits (31), Expect = 2e-09
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtgtct-caactttgtacta 47
||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtctccaactttgtacta 46
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 13 ctccgtcctaaaataagtgtctcaactttgtactaactttag 54
|||||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtactaactttag 52
Score = 58.0 bits (29), Expect = 2e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactt 51
||||| ||| |||| |||||||||| |||||||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtactaactt 53
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 60.0 bits (30), Expect = 6e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagttg 64
|||||||||||| | |||||| || ||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 33 ctcaactttgtactaactttagtacaaagttg 64
||||||||||||||||||||||||| ||||||
Sbjct: 42 ctcaactttgtactaactttagtacgaagttg 73
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| |||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 27 aagtgtctcaactttgtactaactttagtacaaagttg 64
||||| |||||||| ||||||| ||||||||||||||
Sbjct: 81 aagtgactcaacttcgtactaaagttagtacaaagttg 44
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 24 aataagtgtctcaactttgtactaact--ttagtacaaagttg 64
|||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 75 aataagtggctcaactttgtactaactagttagtacaaagttg 33
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/45 (91%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 22 aaaataagtgtctcaactttgtactaact--ttagtacaaagttg 64
|||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 20 aaaataagtgattcaactttgtactaactagttagtacaaagttg 64
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 47 aactttagtacaaagttgtactaaagttgagacacttattttgg 90
||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 45 aacttcagtacaaagttgtactaaagcaaagacacttattttgg 88
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtc 33
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgta 44
|||||||||||||| ||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtg 31
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcctaaaataagtg 216
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtctcaactttgtactaactttagtacaaagtt 63
|||||||||||| | |||||| || ||||||||| ||||||||||| || ||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttatactaactttaatataaagtt 61
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtgtc 33
||||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtc 33
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
Score = 44.1 bits (22), Expect = 4e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 64 gtactaaagttgagacacttatttt-ggacggagggag 100
|||||||| ||| |||||||||||| ||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggag 7
>RF00906;MIR1122;EU730898.1/15478-15583 15368:Brachypodium
distachyon
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 39 tttgtactaactttagtacaaagttgtactaaagttgagacacttatt 86
||||||||||||| |||| |||||||||||||| ||| |||||||||
Sbjct: 68 tttgtactaactt-agtataaagttgtactaaatctgaaacacttatt 22
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtgt 32
||||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtgt 27
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctcaa 37
|||||||||||||| |||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataagtgtc 33
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;AAAA02011454.1/9285-9412 39946:Oryza sativa Indica
Group
Length = 128
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tgctactccctccgtcctaaaat 26
|||||||||||||||||||||||
Sbjct: 127 tgctactccctccgtcctaaaat 105
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataa 28
|||||||||||||||||||||||
Sbjct: 150 ctactccctccgtcctaaaataa 128
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcctaaaataa 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtg 31
||||||||||||||| ||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtg 31
||||||||||||||| ||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaataagtg 31
||||||||||||||| ||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtg 31
||||||||||||||| ||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaataagtg 31
||||||||||||||| ||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 tttagtacaaagttgtactaaa 71
||||||||||||||||||||||
Sbjct: 50 tttagtacaaagttgtactaaa 29
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcctaaaataagtgtctca 36
|||||||||||| | |||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
>RF00906;MIR1122;AF258609.1/6643-6539 37682:Aegilops tauschii
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 47 aactttagtacaaagttgtactaaag 72
||||||||||||||||| ||||||||
Sbjct: 61 aactttagtacaaagttatactaaag 36
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 137 ctactccctccgtcctaaaata 116
>RF00906;MIR1122;ABRL01001046.1/3877-3720 65489:Oryza barthii
Length = 158
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcctaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaataa 26
>RF00906;MIR1122;AAAA02013867.1/52-181 39946:Oryza sativa Indica
Group
Length = 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 127 ctactccctccgtcctaaaata 106
>RF00906;MIR1122;AP003928.3/87481-87370 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcctaaaata 88
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcctaaaata 25
>RF00906;MIR1122;DJ053679.1/1921-2077 4530:Oryza sativa (rice)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcctaaaata 133
>RF00906;MIR1122;AACV01005176.1/8457-8346 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcctaaaata 25
>RF00906;MIR1122;AP008214.1/19205826-19205903 39947:Oryza sativa
Japonica Group
Length = 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 75 ctactccctccgtcctaaaata 54
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcctaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcctaaaata 25
