miRNEST 2.0, an integrative microRNA resource :: BLAST
>46679_miR1439:micropc
Length = 97
Score = 81.8 bits (41), Expect = 1e-16
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||| |||||||| ||||||||||||| |||| || ||||| |||||||||
Sbjct: 1 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| || ||||||||||||||| || |||| ||||
Sbjct: 61 ctaagcttgagacacttattttggaacggagggagta 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaa 41
||||||||| || ||||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67
>45970_miR1439:micropc
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||| ||| ||||||||| |||| ||||||||| || |
Sbjct: 99 atactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttat 40
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| |||||| |||||||||||||| |||| ||||
Sbjct: 39 actaagcttaagagacttattttgggacggagggagta 2
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagt 34
||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>45205_miR1439:micropc
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||| ||| ||||||||| |||| ||||||||| || |
Sbjct: 99 atactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttat 40
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| |||||| |||||||||||||| |||| ||||
Sbjct: 39 actaagcttaagagacttattttgggacggagggagta 2
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagt 34
||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>46754_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46594_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46493_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46463_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46315_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46176_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>45675_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>45656_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>45535_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>44790_miR1439:micropc
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| || ||| |||| || |||||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46048_miR1439:micropc
Length = 58
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctca 40
|||||||||| ||||||||||||||| ||||
Sbjct: 57 atactccctccgtcccaaaataagtgactca 27
>45542_miR1137:micropc
Length = 55
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 ctcaactttgcactaactttagtacaaaatt 67
|||||||||| ||||||||||||| ||||||
Sbjct: 50 ctcaactttgtactaactttagtaaaaaatt 20
>45189_miR1439:micropc
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactt 44
|||||||||| || ||||||||| |||||||||||
Sbjct: 77 atactccctccgttccaaaataactgtctcaactt 43
>45223_miR1137:micropc
Length = 51
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 39 caactttgcactaactttagtacaaa 64
|||||||| |||||||||||||||||
Sbjct: 46 caactttgtactaactttagtacaaa 21
>46347_miR1137:micropc
Length = 55
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 tttgcactaactttagtacaaaatt 67
|||| ||||||||||||||||||||
Sbjct: 12 tttgtactaactttagtacaaaatt 36
>45320_miR1439:micropc
Length = 74
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagt 34
|||||||||| ||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
>45276_miR1439:micropc
Length = 74
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagt 34
|||||||||| ||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
>45016_miR1439:micropc
Length = 74
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagt 34
|||||||||| ||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
