miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 115 bits (58), Expect = 1e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||||||||||| ||||| ||||||| ||||| ||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgt 43
Query: 70 aataaagttaagacacttattttgggacagaggaagtataag 111
| ||| ||| |||||||||||||||||| |||| ||||||||
Sbjct: 42 actaaggttgagacacttattttgggacggagggagtataag 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaac 42
|||||||||| ||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaac 36
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| |||||||||||| ||||||||||||| | ||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagtataa 110
||| || |||||||||||||||||| |||| |||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagtataa 2
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaa 41
|||||||||| |||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
|||||| || ||||||||||||||||||||| ||| |||||||| ||||||||| |||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgta 64
Query: 71 ataaagttaagacacttattttgggacagaggaagtata 109
||| ||| |||||||||||||||||| |||| ||||||
Sbjct: 65 ctaaggttgagacacttattttgggacggagggagtata 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaac 42
|||||||||| ||||||||||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagtataa 110
||| || |||||||||||||||||| |||| |||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagtataa 2
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaa 41
|||||||||| |||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 8e-21
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattac 43
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| || |||||||||||||||||| |||| ||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaa 41
||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 73 aaagttaagacacttattttgggacagaggaagtata 109
|||||| |||||||||||||||||| |||| ||||||
Sbjct: 67 aaagttgagacacttattttgggacggagggagtata 103
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 13 ctccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgtaat 72
||||||| |||||||||||||||||||||||||| |||| ||||| |||||| ||||| |
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 73 aaagttaagacacttattttg 93
| |||| ||||||||||||||
Sbjct: 67 agagttgagacacttattttg 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 73 aaagttaagacacttattttgggacagagg 102
|||||| |||||||||||||||||| ||||
Sbjct: 39 aaagttgagacacttattttgggacggagg 10
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||||||| |||||||| ||||||||| ||| |||| || |||||||||||||||
Sbjct: 101 tactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| ||||||||||||||||| ||| |||| ||||
Sbjct: 41 ctaagattaagacacttattttgagacggagggagta 5
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
|| || |||||||||||||| ||| |||| ||||
Sbjct: 41 ctaggcttgagacacttattttgagacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 73 aaagttaagacacttattttgggacagaggaagta 107
||||||||||||||||||||||||| |||| ||||
Sbjct: 67 aaagttaagacacttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaa 41
||||||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaa 35
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| |||||||||||| ||||||||||||| |||| || |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagtataa 110
|| | |||||||||||||||| || |||| |||||||
Sbjct: 41 ctacgctcaagacacttattttggaacggagggagtataa 2
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||||||||||||||||||||||||| |||| || ||||||||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagtat 108
||| | ||||||||||||||||||| |||| |||||
Sbjct: 41 ctaagctcaagacacttattttgggacggagggagtat 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtct 38
|||||||||| ||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 9 catactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattg 68
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 110 catactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttg 51
Query: 69 ta 70
||
Sbjct: 50 ta 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtct 38
||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 7e-18
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
|||| |||| |||||||||||| ||||||||||||| | || |||||||||||||||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| |||||||||||||||||| || |||| ||||
Sbjct: 41 ttaagcttaagacacttattttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 aaagttaagacacttattttgggacagaggaagta 107
|||||| ||||| |||||||||||| |||||||||
Sbjct: 67 aaagttgagacagttattttgggacggaggaagta 101
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
||||||| || ||||||||||||||||||||||||| |||| || ||||||||| ||||
Sbjct: 4 atactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgt 63
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| || ||||| |||||||||||| |||| ||||
Sbjct: 64 attaagtttgagacagttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 ataaagttaagacacttattttgggac 97
|||||||| ||||||||||||||||||
Sbjct: 41 ataaagttgagacacttattttgggac 15
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaa 41
||||||||| |||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||| |||||||| |||| ||||||||||||||||| ||||
Sbjct: 150 atactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgt 91
Query: 70 a 70
|
Sbjct: 90 a 90
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 35 gtctcaactttgcactaactttagtacaaaattgtaataaagttaagacacttattttgg 94
|||||||||||| ||||| |||||| |||| ||||| ||| ||| |||||||||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 95 gac 97
|||
Sbjct: 17 gac 15
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtcccaaaataagtgtctcaac 42
||||||||||||||||||||||
Sbjct: 15 gtcccaaaataagtgtctcaac 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 39 caactttgcactaactttagtacaaa 64
|||||||||||||| |||||||||||
Sbjct: 44 caactttgcactaaatttagtacaaa 69
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| ||| |||||||| ||||||||||||| | || || ||||||||| ||||
Sbjct: 102 atactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgt 43
Query: 70 aataaagttaagacacttattttgggacagagg 102
| ||| |||||||||||||||| |||| ||||
Sbjct: 42 actaagcttaagacacttattttaggaccgagg 10
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||||||||||| ||||||||||||| |||| || ||||||||| ||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgt- 42
Query: 71 ataaagttaagacacttattttgggacagaggaagtat 108
| |||||| ||||| |||||||| ||| |||| |||||
Sbjct: 41 acaaagttgagacagttattttgagacggagggagtat 4
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttg 46
|||||||||| ||| |||||||| |||||||||||||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaactttg 40
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 71.9 bits (36), Expect = 2e-12
Identities = 87/103 (84%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtg--tctcaactttgcactaactttagtacaaaatt 67
|||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatt 63
Query: 68 gtaataaagttaagacacttattttgggacagaggaagtataa 110
| |||||| || ||||||||| ||||| |||| |||||||
Sbjct: 64 agtacaaagttgagtcacttatttcgggacggagggagtataa 106
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||||||||||| ||||| ||||||| |||| || ||| |||||||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 71 ataaagttaagacacttattttgggacagagg 102
||| ||||||||||||||||||||| ||||
Sbjct: 41 ctaagcttaagacacttattttgggacggagg 10
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
||||||||||| | ||||||||||||||||||||||| |||| || || |||||| ||||
Sbjct: 102 atactccctctcttccaaaataagtgtctcaactttgtactagctctactacaaagttgt 43
Query: 70 aataaagttaagacacttattttg 93
| ||| || ||||| ||||||||
Sbjct: 42 actaagcttgagacagttattttg 19
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 9 catactccctctgtcccaaaataagtgtctcaactttgcactaacttt 56
||||||||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 3 catactccctccgtcccaaaataagtgactcaactttgtactaacttt 50
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 22 tcccaaaataagtgtctcaactttgcactaactttag 58
|||||||||||||| |||||||||| |||||||||||
Sbjct: 117 tcccaaaataagtgactcaactttgtactaactttag 81
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaa 52
|||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 4 atactccctctgtcccaaaataagtgactcaactttgtactaa 46
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
||||||||| |||||||| |||||| ||||||||| |||||||||||||||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaa 37
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| || |||||||||||||||||| |||| |||| || ||||||||| ||||
Sbjct: 4 atactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgt 63
Query: 70 aataaagttaagacacttattttgggacagaggaagtat 108
| ||| || ||| | ||||||||| || |||| |||||
Sbjct: 64 actaagcttgagatagttattttggaacggagggagtat 102
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| |||||||||||| ||||| ||||||| ||| || ||||| |||||| ||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattata 42
Query: 71 ataaagttaagacacttatttt 92
||| ||||||||||||||||
Sbjct: 41 ctaagcttaagacacttatttt 20
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 aaagttaagacacttattttgggacagaggaagta 107
|||||||||||| |||||||||||| |||| ||||
Sbjct: 67 aaagttaagacaattattttgggacggagggagta 101
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||| |||||||||||| |||| | ||||| ||| || |
Sbjct: 102 atactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttat 43
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| |||||||| |||||||||||| |||| ||||
Sbjct: 42 actaagcttaagacagttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 71 ataaagttaagacacttattttgggacagaggaagtat 108
|||||||| ||||| |||||||||||| |||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtat 102
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactt 55
||||| ||||||||||||||||||| |||||||||| ||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtactaactt 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 21 gtcccaaaataagtgtctcaactttgcactaactttag 58
|||||||| |||||| |||||||||| |||||||||||
Sbjct: 15 gtcccaaagtaagtgactcaactttgtactaactttag 52
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
|||||||||||| ||||||||| ||||| ||||||| |||| ||||| || ||| || ||
Sbjct: 5 tactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttata 64
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| |||||||| |||||||| ||| |||| ||||
Sbjct: 65 ctaagtttaagacatttattttgcgacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 aaagttaagacacttattttgggacagaggaagta 107
|||||||||||| ||||||||| ||||||| ||||
Sbjct: 39 aaagttaagacagttattttggaacagagggagta 5
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||| |||||||||| |||||||||| ||||| || ||||| ||| |||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| || ||| | |||||||||||| |||| ||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 63.9 bits (32), Expect = 4e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 22 tcccaaaataagtgtctcaactttgcactaactttagtacaaaattgtaataaagttaag 81
||||||||||||||||||||||||| |||| | ||||||||| ||||| || || ||
Sbjct: 90 tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgtactaggcttgag 31
Query: 82 acacttattttgggac 97
||| ||||||||||||
Sbjct: 30 acagttattttgggac 15
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaa 52
|||||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 101 atactccctccgtcccaaaataagtgactcaactttgtactaa 59
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 37 ctcaactttgcactaactttagtacaaa 64
||||||||||||||||||||||||||||
Sbjct: 41 ctcaactttgcactaactttagtacaaa 68
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 73 aaagttaagacacttattttgggacagaggaagtataa 110
|||||| || ||||||||||||||| |||| |||||||
Sbjct: 66 aaagttgagtcacttattttgggacggagggagtataa 103
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 7e-09
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgt 69
|||||||||| |||||||||||| |||||||||||| |||| | || || ||| || |
Sbjct: 102 atactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttat 43
Query: 70 aataaagttaagacacttattttgggacagaggaagta 107
| ||| |||||||| |||||||||||| |||| ||||
Sbjct: 42 actaagcttaagacagttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 71 ataaagttaagacacttattttgggacagaggaagtat 108
|||||||| ||||| |||||||||||| |||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtat 102
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 13 ctccctctgtcccaaaataagtgtctcaacttt 45
||||||| |||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 55 ttagtacaaaattgtaataaagttaagacacttattttgggacagagg 102
|||||||||| || || ||||||| |||||||||||||||||| ||||
Sbjct: 57 ttagtacaaagttatactaaagttgagacacttattttgggacggagg 10
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 74 aagttaagacacttattttgggacagaggaagtata 109
||||| |||||||||||||||||| |||||||||||
Sbjct: 56 aagttgagacacttattttgggacggaggaagtata 91
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactt 44
||||| |||| ||||||||||||||||||||||||
Sbjct: 90 atacttcctccgtcccaaaataagtgtctcaactt 56
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||| |||||||||| ||||| |||| ||||| || ||||| ||| |||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgta 42
Query: 71 ataaagttaagacacttattttgggacagaggaagta 107
||| || ||| | |||||||||||| |||| ||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 9 catactccctctgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||||
Sbjct: 104 catactccctctgtcccaaaataagtgtc 76
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacagaggaagtat 108
|||||||||||||||||||||| |||||
Sbjct: 76 gacacttattttgggacagagggagtat 103
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 58.0 bits (29), Expect = 3e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| ||| ||||||| ||||||||||||| | ||| || ||||| ||| |||||
Sbjct: 5 tactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgta 64
Query: 71 ataaagttaagacacttattttgggacag 99
||| || ||| | ||||||||||||||
Sbjct: 65 ctaagtttgagaaagttattttgggacag 93
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 8 acatactccctctgtcccaaaataagtgtctcaactttgcactaactttagt 59
|||||||||||| || |||||||| || |||||||||| ||||||||||||
Sbjct: 2 acatactccctccgttccaaaatagatgactcaactttgtactaactttagt 53
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||||||| |||||
Sbjct: 4 atactccctctgtcccaaaataagtgactcaa 35
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaa 41
|||||||||| ||||||||||||||| |||||
Sbjct: 113 atactccctccgtcccaaaataagtgactcaa 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 83 cacttattttgggacagaggaagtata 109
|||||||||||||||||||| ||||||
Sbjct: 29 cacttattttgggacagagggagtata 3
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 71 ataaagttaagacacttattttgggacagaggaagtataa 110
|||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 66 ataaagttaagacagttattttgagacggaggaagtataa 105
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaattgta 70
||||||||| || |||||||| ||||||||||||| |||| || ||||||||| |||||
Sbjct: 101 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgta 42
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaa 64
|||||||||| | |||||||| || |||||||||| |||||||||||||||||
Sbjct: 91 atactccctccattccaaaatagatgactcaactttgtactaactttagtacaaa 37
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtct-caactttgcacta 51
||||||||| |||||||||||||||||| |||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctccaactttgtacta 46
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 51 aactttagtacaaaattgtaataaagttaagacacttattttggga 96
||||| |||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 45 aacttcagtacaaagttgtactaaagcaaagacacttattttggga 90
>RF00906;MIR1122;AP004740.3/39878-39774 39947:Oryza sativa Japonica
Group
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 84 acttattttgggacagaggaagtata 109
||||||||||||||||||||||||||
Sbjct: 28 acttattttgggacagaggaagtata 3
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 64 tactccctctgtcccaaaataagtg 40
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||| |||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 8 acatactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaatt 67
|||||||||||| ||||||||||||||| | || |||| | || |||||||| ||| ||
Sbjct: 104 acatactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagtt 45
Query: 68 gtaataaagttaagacacttatttt 92
|| ||| || |||||||||||||
Sbjct: 44 atactaagattgagacacttatttt 20
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaactttgcactaactttagtacaaaatt 67
||||||||| || | |||||| || |||||||||| ||||||| ||||||||||||
Sbjct: 101 tactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaatt 45
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tacatactccctctgtcccaaaataagtg 35
||||||||||||| |||||||||||||||
Sbjct: 1 tacatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AAAA02021906.1/16695-16573 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 acatactccctctgtcccaaaataa 32
|||||||||||||||||||||||||
Sbjct: 122 acatactccctctgtcccaaaataa 98
>RF00906;MIR1122;AACV01015822.1/5399-5292 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tacatactccctctgtcccaaaata 31
|||||||||||||||||||||||||
Sbjct: 1 tacatactccctctgtcccaaaata 25
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 37 ctcaactttgcactaactttagtacaaa 64
|||||||||| |||||||||||||||||
Sbjct: 64 ctcaactttgtactaactttagtacaaa 37
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 tccctctgtcccaaaataagtgtctcaa 41
|||||||||||||||||||||| |||||
Sbjct: 8 tccctctgtcccaaaataagtgactcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtctcaa 41
||||||||| ||||||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtc 37
|||||||||| |||||||||||||||||
Sbjct: 103 atactccctccgtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtc 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 gacacttattttgggacagaggaagtataa 110
||||||||||||||||| |||| |||||||
Sbjct: 76 gacacttattttgggacggagggagtataa 105
>RF00906;MIR1122;AP004621.3/94317-94428 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tacatactccctctgtcccaaaat 30
||||||||||||||||||||||||
Sbjct: 1 tacatactccctctgtcccaaaat 24
>RF00906;MIR1122;ABXC01004408.1/208298-208202 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgtc 37
|||||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtcccaaaatgagtgtc 31
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtgtctca 40
|||||||||| || |||||||||||||||||
Sbjct: 131 atactccctccgttccaaaataagtgtctca 101
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataagtgtc 37
||||||||| |||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtc 76
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tacatactccctctgtcccaaaataag 33
||||||||||||| |||||||||||||
Sbjct: 1 tacatactccctccgtcccaaaataag 27
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||| |||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccaaaataagtgt 36
||||||||| ||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 cacttattttgggacagaggaagtat 108
||||||||||||||| ||||||||||
Sbjct: 26 cacttattttgggacggaggaagtat 1
>RF01058;MIR806;AACV01008707.1/8338-8098 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 1 atactccctctgtcccaaaata 22
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AC136971.3/14967-14725 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 243 atactccctctgtcccaaaata 222
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||| |||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 acatactccctctgtcccaaaataagtgtc 37
||||| |||||| |||||||||||||||||
Sbjct: 2 acatattccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtgtctcaactttgcactaact--ttagtacaaa 64
||||||| | |||| ||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 4 atactccatgtgtctcaaaataagtgattcaactttgtactaactagttagtacaaa 60
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 atactccctctgtcccaaaata 25
>RF00906;MIR1122;AACV01014487.1/12034-11914 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 attttgggacagaggaagtata 109
||||||||||||||||||||||
Sbjct: 24 attttgggacagaggaagtata 3
>RF00906;MIR1122;AP008212.1/3593579-3593709 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 atactccctctgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 128 atactccctctgtcccaaaata 107
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctctgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 117 tactccctctgtcccaaaataa 96
>RF00906;MIR1122;AAAA02008325.1/22579-22685 39946:Oryza sativa
Indica Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 atactccctctgtcccaaaataagtg 35
|||||||||||||||||| |||||||
Sbjct: 4 atactccctctgtcccaatataagtg 29
