miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 73.8 bits (37), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 2 tactccctccgttccataatataagagtgtttttgacactagtgt-gtgtaaaaaacact 60
|||||||||||| ||| |||||||||| ||||| |||||||||| ||| |||||| ||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 61 cttatattatgggacggagggagta 85
|||||||| || |||||||||||||
Sbjct: 25 cttatattttgagacggagggagta 1
Score = 65.9 bits (33), Expect = 4e-12
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 2 tactccctccgttccataatataagagtgtttttgacactagtgt-gtgtaaaaaacact 60
|||||||||||| || |||||||||| ||||||| ||||| | |||||||||| ||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 61 cttatattatgggacggagggagta 85
|||||||| ||||||||||||||||
Sbjct: 61 cttatattttgggacggagggagta 85
>46560_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46187_miR1132:micropc
Length = 82
Score = 63.9 bits (32), Expect = 2e-11
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 ctccctccgttccataatataagagtgtttttgacactagtgt--gtgtaaaaaacactc 61
|||||||||||||||||| ||||| | |||||||||||||| |||| ||||| ||
Sbjct: 82 ctccctccgttccataatgtaagacgttntttgacactagtgtacgtgtgaaaaaacgtc 23
Query: 62 ttatattatgggacggagggag 83
||| ||||||||||||||||||
Sbjct: 22 ttacattatgggacggagggag 1
>46082_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 49 gtaaaaaacactcttatattatgggacggagggagt 84
||||||||| ||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagagtgttttt 35
||||||||||| |||||||||||||| ||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46744_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 ctcttatattatgggacggagggagt 84
||||||||||||||||||||||||||
Sbjct: 58 ctcttatattatgggacggagggagt 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 actccctccgttccataatataaga 27
|||||||||||||||||||||||||
Sbjct: 1 actccctccgttccataatataaga 25
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataagag 28
||||||||||| ||||||||||||||
Sbjct: 83 actccctccgtcccataatataagag 58
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 60 tcttatattatgggacggagggagt 84
||||||||||||| |||||||||||
Sbjct: 25 tcttatattatggaacggagggagt 1
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 cttatattatgggacggagggagt 84
||||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataag 26
||||||||||| ||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>45994_miR1436:micropc
Length = 162
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatataag 26
||||||||||||||||||||||||
Sbjct: 162 actccctccgttccataatataag 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 cttatattatgggacggagggagt 84
|||||||||||| |||||||||||
Sbjct: 139 cttatattatggaacggagggagt 162
>46261_miR1120:micropc
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 aaaacactcttatattatgggacggag 79
|||||| ||||||||||||||||||||
Sbjct: 50 aaaacattcttatattatgggacggag 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 8 ctccgttccataatataagagtgtttt 34
|||||| ||||||||||||| ||||||
Sbjct: 76 ctccgtcccataatataagaatgtttt 50
>46825_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatata 24
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46353_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatata 24
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>45775_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 actccctccgttccataatata 24
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
