miRNEST 2.0, an integrative microRNA resource :: BLAST
>46428_miR1436:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 10
Query: 67 ggagggagt 75
|||||||||
Sbjct: 9 ggagggagt 1
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgacaaaaaacgtcttacattatgggac 60
Query: 67 ggagggagt 75
|||||||||
Sbjct: 61 ggagggagt 69
>46264_miR1436:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 10
Query: 67 ggagggagt 75
|||||||||
Sbjct: 9 ggagggagt 1
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgacaaaaaacgtcttacattatgggac 60
Query: 67 ggagggagt 75
|||||||||
Sbjct: 61 ggagggagt 69
>45393_miR1436:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 10
Query: 67 ggagggagt 75
|||||||||
Sbjct: 9 ggagggagt 1
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgacaaaaaacgtcttacattatgggac 60
Query: 67 ggagggagt 75
|||||||||
Sbjct: 61 ggagggagt 69
>45005_miR1436:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 10
Query: 67 ggagggagt 75
|||||||||
Sbjct: 9 ggagggagt 1
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgacaaaaaacgtcttacattatgggac 60
Query: 67 ggagggagt 75
|||||||||
Sbjct: 61 ggagggagt 69
>44928_miR1436:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 10
Query: 67 ggagggagt 75
|||||||||
Sbjct: 9 ggagggagt 1
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 actccctccgttccataatgtaagacgttttttgacaaaaaacgtcttacattatgggac 60
Query: 67 ggagggagt 75
|||||||||
Sbjct: 61 ggagggagt 69
>46187_miR1132:micropc
Length = 82
Score = 65.9 bits (33), Expect = 4e-12
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 39 tgtcaaaaaacgtcttacattatggaacggagggag 74
||||||| ||||||||||||||||||||||||||||
Sbjct: 47 tgtcaaanaacgtcttacattatggaacggagggag 82
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 ctccctccgtcccataatgtaagacgtttttt 39
||||||||||||||||||||||||||||||||
Sbjct: 1 ctccctccgtcccataatgtaagacgtttttt 32
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 43 aaaaaacgtcttacattatggaacggagggag 74
||||||||||||||||||||| ||||||||||
Sbjct: 32 aaaaaacgtcttacattatgggacggagggag 1
Score = 52.0 bits (26), Expect = 6e-08
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 8 ctccctccgtcccataatgtaagacgttttttg 40
|||||||||| ||||||||||||||||| ||||
Sbjct: 82 ctccctccgttccataatgtaagacgttntttg 50
>46658_miR1436:micropc
Length = 79
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 9 tccctccgtcccataatgtaagacgttttttg 40
||||||||||||||||||||||||||||||||
Sbjct: 79 tccctccgtcccataatgtaagacgttttttg 48
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 40 gtcaaaaaacgtcttacattatggaacggaggga 73
|||||||||||||||||||||||| |||||||||
Sbjct: 46 gtcaaaaaacgtcttacattatgggacggaggga 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 9 tccctccgtcccataatgtaagacgttttttg 40
|||||||||||| |||||||||||||||||||
Sbjct: 1 tccctccgtcccgtaatgtaagacgttttttg 32
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 39 tgtcaaaaaacgtcttacattatggaacggaggga 73
|||||||||||||||||||||| || |||||||||
Sbjct: 35 tgtcaaaaaacgtcttacattacgggacggaggga 1
>46077_miR1130:micropc
Length = 75
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
||||||||||||||||||||||||||||||
Sbjct: 75 cctccgtcccataatgtaagacgttttttg 46
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 40 gtcaaaaaacgtcttacattatggaacggagg 71
|||||||||||||||||||||||| |||||||
Sbjct: 44 gtcaaaaaacgtcttacattatgggacggagg 75
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||||||||| |||||||||||||||||||
Sbjct: 1 cctccgtcccgtaatgtaagacgttttttg 30
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 39 tgtcaaaaaacgtcttacattatggaacggagg 71
|||||||||||||||||||||| || |||||||
Sbjct: 33 tgtcaaaaaacgtcttacattacgggacggagg 1
>45448_miR1436:micropc
Length = 64
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%), Gaps = 5/65 (7%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttgtcaaaaaacgtcttacattatggaac 66
|||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||
Sbjct: 64 actccctctgtcccataatgtaag-----tattgtcaaaaaacgtcttacattatgagac 10
Query: 67 ggagg 71
|||||
Sbjct: 9 ggagg 5
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||||||| |||||||||||||||||||||
Sbjct: 5 cctccgtctcataatgtaagacgttttttg 34
>46467_miR1130:micropc
Length = 56
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 38 ttgtcaaaaaacgtcttacattatggaacggagg 71
||||||||||||||||||||||||| |||||||
Sbjct: 34 ttgtcaaaaaacgtcttacattatgagacggagg 1
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||||||| |||||||||||||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttg 30
>46150_miR1130:micropc
Length = 75
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||||||||||||||||||||| |||||||
Sbjct: 1 cctccgtcccataatgtaagacattttttg 30
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 39 tgtcaaaaaacgtcttacattatggaacggagg 71
|||||||||| |||||||||||||| |||||||
Sbjct: 33 tgtcaaaaaatgtcttacattatgggacggagg 1
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||| ||||||||| |||||||||||||||
Sbjct: 75 cctctgtcccataacgtaagacgttttttg 46
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 gtcaaaaaacgtcttacattatgg 63
||||||||||||||||| ||||||
Sbjct: 44 gtcaaaaaacgtcttacgttatgg 67
>45479_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgttttttg 40
||||||| ||||||||||||||||| ||||||||
Sbjct: 83 actcccttcgtcccataatgtaagatgttttttg 50
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 39 tgtcaaaaaacgtcttacattatggaacggagggagt 75
||||||||||| ||||||||||||| ||| |||||||
Sbjct: 47 tgtcaaaaaacatcttacattatgggacgaagggagt 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgtttt 37
|||||||| ||||| ||||||||||| ||||
Sbjct: 1 actccctctgtcccgtaatgtaagacatttt 31
>45044_miR1130:micropc
Length = 56
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 38 ttgtcaaaaaacgtcttacattatggaacggagg 71
||||||||||||||||||||||||| |||||||
Sbjct: 34 ttgtcaaaaaacgtcttacattatgagacggagg 1
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 cctccgtcccataatgtaagacgttttttg 40
|||||||| |||||||||||||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttg 30
>45219_miR1436:micropc
Length = 54
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 actccctccgtcccataatgtaagacgtttttt 39
||||||||||||| | |||||||||||||||||
Sbjct: 1 actccctccgtcctaaaatgtaagacgtttttt 33
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 43 aaaaaacgtcttacattatggaacggagggagt 75
||||||||||||||||| | | |||||||||||
Sbjct: 33 aaaaaacgtcttacattttaggacggagggagt 1
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaa 29
||||||||||||||| |||||||
Sbjct: 54 actccctccgtcccaaaatgtaa 32
>46433_miR1439:micropc
Length = 153
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 45 aaaacgtcttacattatggaacggagggagta 76
|||||| |||||||| ||||||||||||||||
Sbjct: 121 aaaacgacttacattttggaacggagggagta 152
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaagacgtttt 37
||||||||||| ||| |||||||| ||||||
Sbjct: 151 actccctccgttccaaaatgtaagtcgtttt 121
>46560_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46416_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46351_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46296_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46229_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46082_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45853_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45812_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45616_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45608_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45459_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45450_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45382_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>45149_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>44955_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga-cgtttttt 39
||||||||||||||||||| ||||| ||||||||
Sbjct: 80 actccctccgtcccataatataagagcgtttttt 47
>46744_miR1436:micropc
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 51 tcttacattatggaacggagggagt 75
||||| |||||||||||||||||||
Sbjct: 25 tcttatattatggaacggagggagt 1
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaaga 31
||||||||||||||||||| |||||
Sbjct: 83 actccctccgtcccataatataaga 59
>46437_miR1436:micropc
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 tcttacattatggaacggagggagt 75
|||||||||||| ||||||||||||
Sbjct: 84 tcttacattatgaaacggagggagt 108
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 actccctccgtcccataatgtaag 30
||||||||||||||||||| ||||
Sbjct: 60 actccctccgtcccataatataag 37
>46280_miR1436:micropc
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 43 aaaaaacgtcttacattatg 62
||||||||||||||||||||
Sbjct: 34 aaaaaacgtcttacattatg 15
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 cataatgtaagacgtttttt 39
||||||||||||||||||||
Sbjct: 15 cataatgtaagacgtttttt 34
>45994_miR1436:micropc
Length = 162
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 cttacattatggaacggagggagt 75
|||| |||||||||||||||||||
Sbjct: 139 cttatattatggaacggagggagt 162
