miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 111 bits (56), Expect = 2e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| ||||||||| || |||||| ||| |||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagtac 66
Query: 72 aaagttgagacacttattttgggacggagggagtat 107
|||| |||||||||||||||||||||||||||||||
Sbjct: 67 aaag-tgagacacttattttgggacggagggagtat 101
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 75 gttgagacacttattttgggacggagggagtataag 110
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gttgagacacttattttgggacggagggagtataag 1
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 35 tctcaactttggtacaactttgtactagagttagtacaaagttgagacacttattttggg 94
||||||| || |||||||||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 78 tctcaaccttagtacaactttgtactaaagttagtacaaacttgagacagttattttggg 137
Query: 95 acggagggagtataag 110
||||||||||||||||
Sbjct: 138 acggagggagtataag 153
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||| ||||| ||||| ||||||||| || ||||||||||| |||| | |||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 72 aaagttgagac 82
|||||||||||
Sbjct: 67 aaagttgagac 77
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 75 gttgagacacttattttgggacggagggag 104
||||||||||||||||||||||| ||||||
Sbjct: 36 gttgagacacttattttgggacgaagggag 7
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 99 ctccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagtgt 40
Query: 72 aaagttgagacacttattttgggacggagggagta 106
||| |||||||||||||||||||||||| ||||||
Sbjct: 39 aaaattgagacacttattttgggacggaaggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 75 gttgagacacttattttgggacggagggagtata 108
||||||||||||||||||||||||||||||||||
Sbjct: 70 gttgagacacttattttgggacggagggagtata 103
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 109 bits (55), Expect = 8e-24
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||
Sbjct: 7 ctccctccgtctcaaaataactgtctcaactttg-tacaactttgtactagagctagtac 65
Query: 72 aaagttgagacacttattttgggacggagggagta 106
|||||||||||| ||||||||||| ||||||||||
Sbjct: 66 aaagttgagacagttattttgggatggagggagta 100
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 68 gtacaaagttgagacacttattttgggacggagggagtat 107
|||||||||||||||| |||||||| ||||||||||||||
Sbjct: 43 gtacaaagttgagacagttattttgagacggagggagtat 4
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| |||||||| || |||||||||||||||| ||||| |||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaatac 66
Query: 72 aaagttgagacacttattttgggacggagggagta 106
|||||||||||| ||||||||||||||||||||||
Sbjct: 67 aaagttgagacatttattttgggacggagggagta 101
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagtataa 109
||||||||||||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagtataa 2
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 107 bits (54), Expect = 3e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 48 gtacaactttgtactaaagttagtacaaagttgagacacttattttgggatggagggagt 107
Query: 106 at 107
||
Sbjct: 108 at 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagta 106
||||||||||||||||||||||||||||
Sbjct: 32 agacacttattttgggacggagggagta 5
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||
Sbjct: 65 gtacaactttgtactagagctagtacaaatttgagacacttattttggaacggagggagt 6
Query: 106 ataag 110
|||||
Sbjct: 5 ataag 1
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 41 gtacaactttgtactaaagttagtacaaagttaagacacttattttgggacggagggagt 100
Query: 106 a 106
|
Sbjct: 101 a 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagta 106
||||||||||||||||| |||||||||||||
Sbjct: 35 ttgagacacttattttgagacggagggagta 5
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 33 tgtctcaactttggtacaactttgtactagagttagtacaaagttgagacacttattttg 92
|||||||||| | ||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 78 tgtctcaactctagtacaactttgtattaaagctagtacaaagttgagacacttattttg 19
Query: 93 ggacggagggag 104
||||||||||||
Sbjct: 18 ggacggagggag 7
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| |||||||| || ||||||| |||||||| ||||| |||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaatac 66
Query: 72 aaagttgagacacttattttgggacggagggagta 106
|||||||||||| ||||||||||||||||||||||
Sbjct: 67 aaagttgagacatttattttgggacggagggagta 101
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagtataa 109
||||||||||||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagtataa 2
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 41 gtacaattttgtactagagctagtacaaagttgagacagttattttgggacggagggagt 100
Query: 106 a 106
|
Sbjct: 101 a 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagtataa 109
||||||||||||||| |||||||||||||||
Sbjct: 32 agacacttattttggaacggagggagtataa 2
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| |||||||| || || || ||||||||| || ||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagtac 66
Query: 72 aaagttgagacacttattttgggacggagggagtata 108
|||||||||||||||||||||||||||||||||||||
Sbjct: 67 aaagttgagacacttattttgggacggagggagtata 103
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagta 106
|||||||||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||
Sbjct: 41 gtacaactttgtactagagctaatacaaagttgagacagttattttgagacggagggagt 100
Query: 106 ataa 109
||||
Sbjct: 101 ataa 104
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 53 tttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 48 tttgtactagagatagtacaaagttgagacacttattttgggatggagggagta 101
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagtat 107
|||||||||||||||||||||||||||||
Sbjct: 32 agacacttattttgggacggagggagtat 4
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 89.7 bits (45), Expect = 7e-18
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 41 gtacaactttgtactagaactagtacaaagttgagacacttattttggga-ggagggagt 99
Query: 106 a 106
|
Sbjct: 100 a 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagtat 107
|||||||| |||||||||||||||| ||||||
Sbjct: 35 ttgagacagttattttgggacggagtgagtat 4
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 7e-18
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct: 41 gtacaactttgtactagagctagtacaaagttgagacatttattttgaaacggagggagt 100
Query: 106 a 106
|
Sbjct: 101 a 101
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| |||||||| || ||||| ||||||||| || |||||
Sbjct: 99 ctccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagtat 40
Query: 72 aaagttgagacacttattttgggacggagggagtat 107
|||||||||||||||||||||||||||| |||||||
Sbjct: 39 aaagttgagacacttattttgggacggatggagtat 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 76 ttgagacacttattttgggacggagggagta 106
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 33 tgtctcaactttggtacaactttgtactagagttagtacaaagttgagacacttattttg 92
|||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 28 tgtctcaagcttagtacaactttgtagtagagctagtacaaagttgagacacttattttg 87
Query: 93 ggacggagggagtata 108
| | |||||||||||
Sbjct: 88 gaagagagggagtata 103
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 33 caactttgtactaaagttagtataaagttgagtcacttaatttgggacggagggagta 90
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 65 ttagtacaaagttgagacacttattttgggacggagggagtata 108
|||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 46 ttagtacaaagttgagtcacttattttgggacagagggagtata 3
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 65 ttagtacaaagttgagacacttattttgggacggagggagtataa 109
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 59 ttagtacaaagttgagtcacttattttgggacggagggagtataa 103
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 49 caactttgtactagagttagtacaaagttgag 80
||||||||||||| ||||||| ||||||||||
Sbjct: 72 caactttgtactaaagttagtgcaaagttgag 41
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 63 agttagtacaaagttgagacacttattttgggacggagggagtat 107
|||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 48 agttagtacaaagttgagtcacttattttgggacggagggagtat 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 63 agttagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 85 agttagtacaaagttgagtcacttattttgggatggagcgagta 128
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| | |||||| || |||||||||| |||||||| ||||
Sbjct: 7 ctccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagtgt 66
Query: 72 aaagttgagacacttattttgggacggagggagta 106
|||||||||| |||||||||| |||||||||||||
Sbjct: 67 aaagttgagatacttattttgagacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagta 106
|||||| | ||||||||||||||||||||||
Sbjct: 35 ttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 65 ttagtacaaagttgagacacttattttgggacggagggagtataa 109
|||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 62 ttagtacaaagttgagtcacttatttcgggacggagggagtataa 106
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/58 (89%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 53 tttgtactagagttagtacaaagttgaga--cacttattttgggacggagggagtata 108
||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 60 tttgtactaaaaatagtataaagttgagatccacttattttgggacggagggagtata 3
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||| |||||||||||| |||||||| ||||||||| |||||||| ||| ||||||||
Sbjct: 41 gtacaattttgtactagagctagtacaatgttgagacagttattttgagacagagggagt 100
Query: 106 a 106
|
Sbjct: 101 a 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagta 106
|||||||||||||| |||||||||||||
Sbjct: 32 agacacttattttgagacggagggagta 5
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagtata 108
||||||||||||| |||||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttggaatggagggagtata 92
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| ||||| || || ||| || ||| ||||||| |||||
Sbjct: 7 ctccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagtat 66
Query: 72 aaagttgagacacttattttgggacggagggagtat 107
|||||||||||| |||||||||||||||||||||||
Sbjct: 67 aaagttgagacagttattttgggacggagggagtat 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagta 106
||||| ||||||||||||||||||||||
Sbjct: 32 agacagttattttgggacggagggagta 5
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
|||||||||||| ||||| | |||||| || |||||||||| |||||||| ||||
Sbjct: 7 ctccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagtgt 66
Query: 72 aaagttgagacacttattttgggacggagggagta 106
|||| ||||| |||||||||| |||||||||||||
Sbjct: 67 aaagctgagatacttattttgagacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagta 106
|||||| | ||||||||||||||||||||||
Sbjct: 35 ttgagaaagttattttgggacggagggagta 5
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagtata 108
||||||||||||| |||||||||||||||||| || ||||||| ||||||| ||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttgaaacggaggaagtata 92
Query: 109 ag 110
||
Sbjct: 93 ag 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
||||||||||||| |||||||||||||| | || |||||||| ||||| ||||||
Sbjct: 62 caactttgtactaactttagtacaaagttgggtcatctattttggaacggaaggagta 5
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 66 tagtacaaagttgagacacttattttgggacggagggagtat 107
||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 61 tagtataaagttgagacagttattttgggacggagggagtat 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagta 106
||||| ||||||||||||||||||||||
Sbjct: 32 agacagttattttgggacggagggagta 5
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 57 tactagagttagtacaaagttgagacacttattttgggacggagggagta 106
|||||||| ||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 52 tactagagctagaacaaagttaagacaattattttgggacggagggagta 101
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 67.9 bits (34), Expect = 3e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 66 tagtacaaagttg-agacacttattttgggacggagggagta 106
||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tagtacaaagttggagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 72 aaagttgagacacttattttgggacggagggag 104
|||||||||||||||||||||||||||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagggag 7
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 68 gtacaaagttgagacacttattttgggacggagggagtata 108
|||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 51 gtactaagttgagacacttattttgggacggaggaagtata 91
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 46 gtacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagt 105
|||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 65 gtacaactttatactagagctagggtaaagttgagacacctattttgagacggagggagt 6
Query: 106 a 106
|
Sbjct: 5 a 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagta 106
|||| ||||||||||||||||||||||
Sbjct: 89 gacagttattttgggacggagggagta 115
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 63 agttagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 54 agttagtacaaagttgagtcacttattttgggacagagcgagta 97
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 63 agttagtacaaagttgagacacttattttgggacggag 100
|||||||||||||||||| |||||| ||||||||||||
Sbjct: 48 agttagtacaaagttgagtcacttactttgggacggag 11
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 47 tacaactttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
||||| ||||||||| | || ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 42 tacaattttgtactaaatctaatacaaagttgagacagttattttgggacggaggaagta 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagta 106
||||||||||||||| ||||||||||||
Sbjct: 32 agacacttattttggaacggagggagta 5
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 82/96 (85%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtac-aactttgtactagagttagta 70
|||||||||| | ||||| ||| |||||||||| ||| || ||||||||| ||||||||
Sbjct: 7 ctccctccgttccaaaatagatgactcaactttg-tactaattttgtactatagttagta 65
Query: 71 caaagttgagacacttattttgggacggagggagta 106
|||||||||| || |||||| | ||||||||||||
Sbjct: 66 caaagttgagtcatctattttagaacggagggagta 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 65 ttagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||||||| || |||||||| ||||||||||||
Sbjct: 46 ttagtacaaagttgagtcatctattttggaacggagggagta 5
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagtat 107
||||||| |||| |||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 62 caactttacactaaagttagtacaaagttgagtcatctattttggaacggagggagtat 4
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 76 ttgagacacttattttgggacggagggagtataag 110
||||| |||||||||||||||||||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagtataag 116
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagtata 108
||||| ||||||||||||||| |||||||||||
Sbjct: 35 ttgagtcacttattttgggacagagggagtata 3
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 49 caactttgtactagagttagtacaaagttgag 80
|||||| |||||| ||||||||||||||||||
Sbjct: 73 caacttcgtactaaagttagtacaaagttgag 42
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 69 tacaaagttgagacacttattttgggacggagggagta 106
|||||||||||| |||||| ||||||||||||||||||
Sbjct: 42 tacaaagttgagtcacttaatttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 gttgagacacttattttgggacggagggagta 106
|||||| |||||| ||||||||||||||||||
Sbjct: 82 gttgagtcacttaatttgggacggagggagta 113
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagtataa 109
||||||||||||||||||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagtataa 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 80 gacacttattttgggacggagggagta 106
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 66 tagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||| ||||| |||||||||||||||||||||
Sbjct: 61 tagtacaaagttaagacagatattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 79 agacacttattttgggacggagggagtataa 109
|||||||||||||||||||||||| ||||||
Sbjct: 32 agacacttattttgggacggagggggtataa 2
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 57/65 (87%), Gaps = 5/65 (7%)
Strand = Plus / Plus
Query: 49 caactttgtactag--agttagtacaaagttgagacac---ttattttgggacggaggga 103
||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 33 caactttgtactaactagttagtacaaagttgagccacttattattttgggacgcaggga 92
Query: 104 gtata 108
|||||
Sbjct: 93 gtata 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/46 (89%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 49 caactttgtactag--agttagtacaaagttgagacacttattttg 92
||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 64 caactttgtactaactagttagtacaaagttgaatcacttattttg 19
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtata 108
|||||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtata 3
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 33 tgtctcaactttggtacaactttgtactagagttagtacaaagttgagacacttattttg 92
|||||||| || ||| |||||| ||||| || || |||||| || | ||||||||||||
Sbjct: 28 tgtctcaatcttagtataactttatactaaagctaatacaaaattaacacacttattttg 87
Query: 93 ggacggagggagtat 107
||| |||||||||||
Sbjct: 88 ggatggagggagtat 102
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 tgagacacttattttgggacggagggagtat 107
||||||||||||||||| |||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagtat 131
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 76 ttgagacacttattttgggacggagggagta 106
||||| |||||||||||||||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagta 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 76 ttgagacacttattttgggacggagggagtataa 109
||||| ||||||||||||||| |||||| |||||
Sbjct: 35 ttgagtcacttattttgggacagagggattataa 2
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 81 acacttattttgggacggagggagta 106
||||||||||||||||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 49 caactttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
||||||||||||| || ||||||||||||||| | |||||| | ||||||||||||
Sbjct: 33 caactttgtactaaagatagtacaaagttgagtcgtctattttagaacggagggagta 90
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagtataa 109
||||||||||||||||||| ||||||||||
Sbjct: 56 gacacttattttgggacggtgggagtataa 85
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||||| |||||
Sbjct: 219 cacttattttgggacggaggtagtat 244
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 221 cacttattttgggacggagggagta 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||||| |||||
Sbjct: 26 cacttattttgggacggaggtagtat 1
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||||| |||||
Sbjct: 26 cacttattttgggacggaggaagtat 1
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||||| |||||
Sbjct: 26 cacttattttgggacggaggtagtat 1
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||||| |||||
Sbjct: 220 cacttattttgggacggaggtagtat 245
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtataag 110
|||||||||||||||||||||||||
Sbjct: 68 tattttgggacggagggagtataag 92
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 50 aactttgtactagagttagtacaaagttgagacacttattttgggacggagggagta 106
|||||| || || |||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 61 aactttatattaaagttagtataaagttgagtcatctattttggaacggagggagta 5
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 66 tagtacaaagttgagacacttattttgggacggagggagta 106
|||||||||||| ||||| ||||||||| || |||||||||
Sbjct: 45 tagtacaaagttaagacagttattttggaacagagggagta 5
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 87 cacttattttgggacggagggagta 111
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 84 cttattttgggacggagggagtat 107
||||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagtat 1
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 cttattttgggacggagggagtat 107
||||||||||||||||||||||||
Sbjct: 217 cttattttgggacggagggagtat 240
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 66 tagtacaaagttgagacacttattttgggacggagggagtataa 109
||||||||||||| | || |||||||| |||||||||||||||
Sbjct: 24 tagtacaaagttgggtcatctattttggaacggagggagtataa 67
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 gacacttattttgggacggaggga 103
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagta 106
||||||||||||||||||| |||||||
Sbjct: 75 gacacttattttgggacggcgggagta 101
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagtat 107
|||||||||||| |||||||||||||||
Sbjct: 76 gacacttattttaggacggagggagtat 103
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 79/96 (82%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 12 ctccctccgtccaaaaatttatgtctcaactttggtacaactttgtactagagttagtac 71
||||||||||| ||||| |||||||| || ||| ||||||| |||| || |||||
Sbjct: 98 ctccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagtat 40
Query: 72 aaagttgagacacttattttgggacggagggagtat 107
||| || ||| |||||||||| ||||||||||||||
Sbjct: 39 aaaattaagaaacttattttgagacggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 76 ttgagacacttattttgggacggagggagta 106
|||||||| |||||||| |||||||||||||
Sbjct: 70 ttgagacaattattttgagacggagggagta 100
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagtat 107
||||||||||||||||| ||||||||||
Sbjct: 76 gacacttattttgggacagagggagtat 103
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 attttgggacggagggagtataag 110
||||||||||||||||||||||||
Sbjct: 119 attttgggacggagggagtataag 142
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 agacacttattttgggacggagggagta 106
||||||||||||||||| ||||||||||
Sbjct: 74 agacacttattttgggatggagggagta 101
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtataa 109
||||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtataa 133
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagtata 108
||||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtata 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 135 ttattttgggacggagggagta 156
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtataa 109
||||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtataa 133
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 83 acttattttgggacggagggagta 106
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 attttgggacggagggagtataag 110
||||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtataag 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 92 tattttgggacggagggagtat 113
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtataa 109
||||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtataa 94
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa Japonica
Group
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 84 cttattttgggacggagggagtat 107
||||||||||||||||||||||||
Sbjct: 27 cttattttgggacggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 cttattttgggacggagggagta 106
|||||||||||||||||||||||
Sbjct: 71 cttattttgggacggagggagta 93
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa Indica
Group
Length = 99
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtataa 109
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtataa 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 75 tattttgggacggagggagtat 96
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 84 cttattttgggacggagggagta 106
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagta 236
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtat 4
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagta 106
|||||||||||||||||||||| ||||
Sbjct: 80 gacacttattttgggacggaggtagta 106
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 agacacttattttgggacggagg 101
|||||||||||||||||||||||
Sbjct: 63 agacacttattttgggacggagg 85
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttgggacggagggagta 106
||||||||||||||||| |||||||||
Sbjct: 76 gacacttattttgggaccgagggagta 102
>RF00906;MIR1122;EU730898.1/15478-15583 15368:Brachypodium
distachyon
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 57/66 (86%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 46 gtacaactttgtactagagttagtacaaagtt--gagacacttattttgggacggaggga 103
|||||||||| ||||| |||||||||||| | |||||||||||| ||| ||||||||
Sbjct: 41 gtacaactttatacta-agttagtacaaaaatctgagacacttattatggatcggaggga 99
Query: 104 gtataa 109
||||||
Sbjct: 100 gtataa 105
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa Indica
Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 51 tattttgggacggagggagtata 73
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa Indica
Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagta 132
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 97 tattttgggacggagggagtata 119
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa Japonica
Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 97 ttattttgggacggagggagtat 119
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 114 tattttgggacggagggagtata 136
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 86 tattttgggacggagggagtata 108
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa Japonica
Group
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtata 110
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagta 99
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 106 tattttgggacggagggagtata 128
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtata 154
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 72 tattttgggacggagggagtata 94
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtat 4
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtata 110
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 62 tattttgggacggagggagtata 84
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagtat 110
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa Japonica
Group
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtata 3
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagtat 126
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtata 132
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 102 tattttgggacggagggagtata 124
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
|||||||||||||||||| |||||||
Sbjct: 26 cacttattttgggacggatggagtat 1
>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 22 tattttgggacggagggagtat 1
>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 22 tattttgggacggagggagtat 1
>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 22 tattttgggacggagggagtat 1
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 101 tattttgggacggagggagtat 122
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 101 tattttgggacggagggagtat 122
>RF00906;MIR1122;FJ234838.1/106075-106199 29664:Brachypodium
sylvaticum
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 70 acaaagttgagacacttattttgggacggagggagtat 107
||||| ||||| |||||| | |||||||||||||||||
Sbjct: 41 acaaatttgagtcacttaatatgggacggagggagtat 4
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 70 acaaagttgagacacttattttgggacggagggagtat 107
||||| ||||| |||||| | |||||||||||||||||
Sbjct: 86 acaaatttgagtcacttaatatgggacggagggagtat 123
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttgggacggagggagtat 107
|||||| |||||||||||||||||||
Sbjct: 29 cacttaatttgggacggagggagtat 4
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 cacttattttgggacggagggagtat 107
||||||||||||||||||||| ||||
Sbjct: 66 cacttattttgggacggagggggtat 91
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 58 tattttgggacggagggagtat 37
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 107 tattttgggacggagggagtat 128
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa Indica
Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 138 tattttgggacggagggagtat 159
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa Indica
Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 acttattttgggacggagggagtata 108
|||||||||| |||||||||||||||
Sbjct: 93 acttattttgagacggagggagtata 118
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtat 132
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 125 tattttgggacggagggagtat 146
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 101 tattttgggacggagggagtat 122
>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtat 132
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtat 109
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 107 tattttgggacggagggagtat 128
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtat 109
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 143 tattttgggacggagggagtat 164
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagta 113
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtat 109
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 72 tattttgggacggagggagtat 93
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 55 tattttgggacggagggagtat 76
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa Japonica
Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtat 154
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagta 93
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 85 ttattttgggacggagggagta 106
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 26 tattttgggacggagggagtat 47
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttgggacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtat 4
