miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48647_hpi-miR1122:pmrd
          Length = 180

 Score =  149 bits (75), Expect = 1e-36
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| ||||||||||||| ||||||||||||| |||||||| || |  |||||||||
Sbjct: 152 ctccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacacta 93

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||| | |||| ||||||||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 92  aaacatgactagatacatccgtatttagacaaatctatgacaagaattttgggacggagg 33

                 
Query: 176 gagtat 181
           ||||||
Sbjct: 32  gagtat 27



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| ||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 30  ctccctccgtcccaaaattcttgtcatagatttgtctaaatacggat 76



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 144 acaaatctaggacaagaattttaggacagagggagtat 181
           ||||||||| ||| |||||||| |||| ||||||||||
Sbjct: 118 acaaatctaagacnagaattttgggacggagggagtat 155




>54757_tmo-miR1122:pmrd
          Length = 180

 Score =  127 bits (64), Expect = 4e-30
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                       
Query: 65  tcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaacgtaac 124
           ||||||||||||||||||| |||||| |||||| |||| || |||||||||||| |||||
Sbjct: 141 tcccaaaattcttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaac 82

                                                                   
Query: 125 taaatacatccgtatttagacaaatctaggacaagaattttaggacagagggagta 180
           || |||||||| ||||||||||||| || ||||| |||||| |||| |||||||||
Sbjct: 81  tacatacatccatatttagacaaatttaagacaacaattttgggacggagggagta 26



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggat 102
           ||||||| ||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 28  ctccctccgtcccaaaattgttgtcttaaatttgtctaaatatggat 74



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 128 atacatccgtatttagacaaatctaggacaagaatttt 165
           |||||||||||| || |||||| || ||||||||||||
Sbjct: 100 atacatccgtatctaaacaaatgtaagacaagaatttt 137




>54697_tae-miR1122:pmrd
          Length = 295

 Score =  115 bits (58), Expect = 2e-26
 Identities = 109/126 (86%)
 Strand = Plus / Minus

                                                                       
Query: 56  ctccctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacacta 115
           ||||||| |||||||||||||||||||||||| ||||||||| |||| || |||| ||||
Sbjct: 149 ctccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatctaatacta 90

                                                                       
Query: 116 aaacgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagg 175
           |||| | |||  |||||| |||||||||||||||||| | ||| | |||| |||| ||||
Sbjct: 89  aaacatgacttgatacatacgtatttagacaaatctaagccaaaatttttgggacggagg 30

                 
Query: 176 gagtat 181
           ||||||
Sbjct: 29  gagtat 24



 Score = 69.9 bits (35), Expect = 8e-13
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 128 atacatccgtatttagacaaatctaggacaagaattttaggacagagggagtata 182
           |||||||||||| ||||| |||||| |||||||||||| |||| |||||||||||
Sbjct: 99  atacatccgtatctagactaatctaagacaagaattttgggacggagggagtata 153



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 56 ctccctctgtcccaaaattcttgtcttagatttgtcta 93
          ||||||| ||||||||| | ||| ||||||||||||||
Sbjct: 27 ctccctccgtcccaaaaattttggcttagatttgtcta 64




>54762_tur-miR1122:pmrd
          Length = 180

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 59  cctctgtcccaaaattcttgtcttagatttgtctagatatggatatacctaacactaaaa 118
           ||||||||||||||||||| ||||| |||| | || ||| | || || ||||||||||||
Sbjct: 147 cctctgtcccaaaattcttatcttaaatttatttaaatacgaatgtatctaacactaaaa 88

                                                                       
Query: 119 cgtaactaaatacatccgtatttagacaaatctaggacaagaattttaggacagagggag 178
            || | ||||||||| ||||| |||||||||||| ||||  |||||||||||| | ||||
Sbjct: 87  tgtgaataaatacattcgtatgtagacaaatctaagacacaaattttaggacaaaaggag 28

             
Query: 179 ta 180
           ||
Sbjct: 27  ta 26